RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 SHROOM2Q13796 1616 aa19.88■□□□□ 0.77
RABGGTA-215ENST00000560207 IQGAP2Q13576 1575 aa19.83■□□□□ 0.77
RABGGTA-215ENST00000560207 ARHGEF11O15085 1522 aa19.82■□□□□ 0.76
RABGGTA-215ENST00000560207 RIMBP3CA6NJZ7 1639 aa19.81■□□□□ 0.76
RABGGTA-215ENST00000560207 RIMBP3BA6NNM3 1639 aa19.81■□□□□ 0.76
RABGGTA-215ENST00000560207 RIMBP3Q9UFD9 1639 aa19.81■□□□□ 0.76
RABGGTA-215ENST00000560207 FAM9AQ8IZU1 332 aaPredicted RBP19.81■□□□□ 0.76
RABGGTA-215ENST00000560207 JPH4Q96JJ6 628 aa19.8■□□□□ 0.76
RABGGTA-215ENST00000560207 GOLGA3Q08378 1498 aa19.76■□□□□ 0.75
RABGGTA-215ENST00000560207 CARMIL2Q6F5E8 1435 aa19.75■□□□□ 0.75
RABGGTA-215ENST00000560207 UGGT2Q9NYU1 1516 aa19.73■□□□□ 0.75
RABGGTA-215ENST00000560207 PRG4Q92954 1404 aaPredicted RBP19.73■□□□□ 0.75
RABGGTA-215ENST00000560207 UBTFP17480 764 aaKnown RBP19.64■□□□□ 0.73
RABGGTA-215ENST00000560207 ARAP1Q96P48 1450 aa19.63■□□□□ 0.73
RABGGTA-215ENST00000560207 KIAA0556O60303 1618 aa19.62■□□□□ 0.73
RABGGTA-215ENST00000560207 ERCC6L2Q5T890 1561 aa19.61■□□□□ 0.73
RABGGTA-215ENST00000560207 TNIKQ9UKE5 1360 aa19.6■□□□□ 0.73
RABGGTA-215ENST00000560207 EFCAB5A4FU69 1503 aa19.6■□□□□ 0.73
RABGGTA-215ENST00000560207 DISP1Q96F81 1524 aa19.6■□□□□ 0.73
RABGGTA-215ENST00000560207 CYB5RLQ6IPT4 315 aa19.58■□□□□ 0.72
RABGGTA-215ENST00000560207 SAMD9Q5K651 1589 aa19.57■□□□□ 0.72
RABGGTA-215ENST00000560207 PTPRGP23470 1445 aa19.55■□□□□ 0.72
RABGGTA-215ENST00000560207 UHRF1BP1LA0JNW5 1464 aa19.46■□□□□ 0.71
RABGGTA-215ENST00000560207 UACAQ9BZF9 1416 aa19.44■□□□□ 0.7
RABGGTA-215ENST00000560207 NPM1P06748 294 aaKnown RBP eCLIP19.43■□□□□ 0.7
RABGGTA-215ENST00000560207 EHMT2Q96KQ7 1210 aa19.43■□□□□ 0.7
RABGGTA-215ENST00000560207 ABCC2Q92887 1545 aa19.41■□□□□ 0.7
RABGGTA-215ENST00000560207 ADCY10Q96PN6 1610 aa19.4■□□□□ 0.7
RABGGTA-215ENST00000560207 FMN1Q68DA7 1419 aa19.4■□□□□ 0.7
RABGGTA-215ENST00000560207 ABCA8O94911 1581 aa19.38■□□□□ 0.69
RABGGTA-215ENST00000560207 ARHGAP35Q9NRY4 1499 aa19.38■□□□□ 0.69
RABGGTA-215ENST00000560207 CLIP1P30622 1438 aa19.37■□□□□ 0.69
RABGGTA-215ENST00000560207 RANGAP1P46060 587 aaPredicted RBP19.37■□□□□ 0.69
RABGGTA-215ENST00000560207 P3H3Q8IVL6 736 aa19.36■□□□□ 0.69
RABGGTA-215ENST00000560207 RAPGEF6Q8TEU7 1601 aa19.35■□□□□ 0.69
RABGGTA-215ENST00000560207 FHOD3Q2V2M9 1422 aa19.34■□□□□ 0.69
RABGGTA-215ENST00000560207 TTBK1Q5TCY1 1321 aaPredicted RBP19.34■□□□□ 0.69
RABGGTA-215ENST00000560207 MAPKBP1O60336 1514 aa19.33■□□□□ 0.68
RABGGTA-215ENST00000560207 KDM5BQ9UGL1 1544 aa19.33■□□□□ 0.68
RABGGTA-215ENST00000560207 PLB1Q6P1J6 1458 aa19.32■□□□□ 0.68
RABGGTA-215ENST00000560207 CEP162Q5TB80 1403 aa19.32■□□□□ 0.68
RABGGTA-215ENST00000560207 LOC105371045A0A1W2PR82 267 aa19.3■□□□□ 0.68
RABGGTA-215ENST00000560207 ZCCHC11Q5TAX3 1644 aaKnown RBP19.28■□□□□ 0.68
RABGGTA-215ENST00000560207 HECW1Q76N89 1606 aa19.26■□□□□ 0.67
RABGGTA-215ENST00000560207 CASKIN1Q8WXD9 1431 aa19.21■□□□□ 0.67
RABGGTA-215ENST00000560207 NUP153P49790 1475 aaKnown RBP19.21■□□□□ 0.67
RABGGTA-215ENST00000560207 FYCO1Q9BQS8 1478 aa19.21■□□□□ 0.67
RABGGTA-215ENST00000560207 ATP10BO94823 1461 aa19.19■□□□□ 0.66
RABGGTA-215ENST00000560207 ASXL2Q76L83 1435 aa19.18■□□□□ 0.66
RABGGTA-215ENST00000560207 CCDC18Q5T9S5 1454 aa19.18■□□□□ 0.66
RABGGTA-215ENST00000560207 CDK11AQ9UQ88 783 aaPredicted RBP19.17■□□□□ 0.66
RABGGTA-215ENST00000560207 ABCC10Q5T3U5 1492 aa19.16■□□□□ 0.66
RABGGTA-215ENST00000560207 WDR7Q9Y4E6 1490 aa19.16■□□□□ 0.66
RABGGTA-215ENST00000560207 KIF13AQ9H1H9 1805 aa19.15■□□□□ 0.66
RABGGTA-215ENST00000560207 EPRSP07814 1512 aaKnown RBP19.15■□□□□ 0.66
RABGGTA-215ENST00000560207 PCF11O94913 1555 aaKnown RBP19.15■□□□□ 0.66
RABGGTA-215ENST00000560207 TRHP20396 242 aaPredicted RBP19.14■□□□□ 0.65
RABGGTA-215ENST00000560207 GLI2P10070 1586 aa19.14■□□□□ 0.65
RABGGTA-215ENST00000560207 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.13■□□□□ 0.65
RABGGTA-215ENST00000560207 HNRNPUL2Q1KMD3 747 aaKnown RBP19.13■□□□□ 0.65
RABGGTA-215ENST00000560207 DIP2BQ9P265 1576 aa19.13■□□□□ 0.65
RABGGTA-215ENST00000560207 PLEKHD1A6NEE1 506 aa19.12■□□□□ 0.65
RABGGTA-215ENST00000560207 VPS8Q8N3P4 1428 aa19.11■□□□□ 0.65
RABGGTA-215ENST00000560207 ATP1B4Q9UN42 357 aaPredicted RBP19.11■□□□□ 0.65
RABGGTA-215ENST00000560207 LRRIQ1Q96JM4 1722 aa19.08■□□□□ 0.65
RABGGTA-215ENST00000560207 CFAP43Q8NDM7 1665 aa19.08■□□□□ 0.64
RABGGTA-215ENST00000560207 FAM69CQ0P6D2 419 aa19.06■□□□□ 0.64
RABGGTA-215ENST00000560207 CDK13Q14004 1512 aaKnown RBP19.05■□□□□ 0.64
RABGGTA-215ENST00000560207 MAP3K1Q13233 1512 aa19.03■□□□□ 0.64
RABGGTA-215ENST00000560207 MAP3K4Q9Y6R4 1608 aa19.03■□□□□ 0.64
RABGGTA-215ENST00000560207 ARID3CA6NKF2 412 aa19.02■□□□□ 0.64
RABGGTA-215ENST00000560207 ABCA9Q8IUA7 1624 aa19.02■□□□□ 0.64
RABGGTA-215ENST00000560207 TROQ12816 1431 aaPredicted RBP19■□□□□ 0.63
RABGGTA-215ENST00000560207 APLP2Q06481 763 aa18.99■□□□□ 0.63
RABGGTA-215ENST00000560207 KCNH8Q96L42 1107 aa18.99■□□□□ 0.63
RABGGTA-215ENST00000560207 KIF14Q15058 1648 aa18.99■□□□□ 0.63
RABGGTA-215ENST00000560207 TEX14Q8IWB6 1497 aa18.98■□□□□ 0.63
RABGGTA-215ENST00000560207 TSPOAP1O95153 1857 aa18.97■□□□□ 0.63
RABGGTA-215ENST00000560207 TIAM1Q13009 1591 aa18.96■□□□□ 0.63
RABGGTA-215ENST00000560207 CD109Q6YHK3 1445 aa18.95■□□□□ 0.62
RABGGTA-215ENST00000560207 MAGI3Q5TCQ9 1506 aa18.95■□□□□ 0.62
RABGGTA-215ENST00000560207 MTUS2Q5JR59 1369 aa18.93■□□□□ 0.62
RABGGTA-215ENST00000560207 PHLDB1Q86UU1 1377 aa18.93■□□□□ 0.62
RABGGTA-215ENST00000560207 EHBP1L1Q8N3D4 1523 aa18.93■□□□□ 0.62
RABGGTA-215ENST00000560207 MYO5CQ9NQX4 1742 aa18.92■□□□□ 0.62
RABGGTA-215ENST00000560207 CFAP74Q9C0B2 1584 aa18.92■□□□□ 0.62
RABGGTA-215ENST00000560207 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.91■□□□□ 0.62
RABGGTA-215ENST00000560207 ARAP3Q8WWN8 1544 aa18.91■□□□□ 0.62
RABGGTA-215ENST00000560207 PPRC1Q5VV67 1664 aaKnown RBP18.9■□□□□ 0.62
RABGGTA-215ENST00000560207 SUPT6HQ7KZ85 1726 aaKnown RBP18.88■□□□□ 0.61
RABGGTA-215ENST00000560207 TTC37Q6PGP7 1564 aa18.86■□□□□ 0.61
RABGGTA-215ENST00000560207 NEO1Q92859 1461 aa18.86■□□□□ 0.61
RABGGTA-215ENST00000560207 LRRC9Q6ZRR7 1453 aa18.85■□□□□ 0.61
RABGGTA-215ENST00000560207 PLCH2O75038 1416 aa18.84■□□□□ 0.61
RABGGTA-215ENST00000560207 ITSN2Q9NZM3 1697 aa18.84■□□□□ 0.61
RABGGTA-215ENST00000560207 PREX2Q70Z35 1606 aa18.82■□□□□ 0.6
RABGGTA-215ENST00000560207 CDC42BPAQ5VT25 1732 aa18.82■□□□□ 0.6
RABGGTA-215ENST00000560207 EFCAB2Q5VUJ9 269 aa18.8■□□□□ 0.6
RABGGTA-215ENST00000560207 KDM6BO15054 1643 aa18.8■□□□□ 0.6
RABGGTA-215ENST00000560207 CDC42BPBQ9Y5S2 1711 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms