RNA–Protein interactions for RNA: ENST00000560107.6

LRRC49-221, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 2,721 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-221ENST00000560107 PLEKHG5O94827 1062 aa7.36□□□□□ -1.23
LRRC49-221ENST00000560107 BCANQ96GW7 911 aa7.36□□□□□ -1.23
LRRC49-221ENST00000560107 ANP32EQ9BTT0 268 aa7.36□□□□□ -1.23
LRRC49-221ENST00000560107 PLPPR3Q6T4P5 718 aa7.35□□□□□ -1.23
LRRC49-221ENST00000560107 RAB3GAP2Q9H2M9 1393 aa7.35□□□□□ -1.23
LRRC49-221ENST00000560107 ARHGAP35Q9NRY4 1499 aa7.34□□□□□ -1.23
LRRC49-221ENST00000560107 MAPKBP1O60336 1514 aa7.34□□□□□ -1.23
LRRC49-221ENST00000560107 DDX10Q13206 875 aaKnown RBP7.33□□□□□ -1.24
LRRC49-221ENST00000560107 FKBP8Q14318 412 aa7.33□□□□□ -1.24
LRRC49-221ENST00000560107 CUX1P39880 1505 aa7.33□□□□□ -1.24
LRRC49-221ENST00000560107 KIF27Q86VH2 1401 aa7.33□□□□□ -1.24
LRRC49-221ENST00000560107 SIN3AQ96ST3 1273 aa7.31□□□□□ -1.24
LRRC49-221ENST00000560107 WDR97A6NE52 1622 aa7.31□□□□□ -1.24
LRRC49-221ENST00000560107 RTN4Q9NQC3 1192 aaKnown RBP7.3□□□□□ -1.24
LRRC49-221ENST00000560107 SETD5Q9C0A6 1442 aa7.3□□□□□ -1.24
LRRC49-221ENST00000560107 HIRIP3Q9BW71 556 aaPredicted RBP7.29□□□□□ -1.24
LRRC49-221ENST00000560107 TIAM1Q13009 1591 aa7.29□□□□□ -1.24
LRRC49-221ENST00000560107 PPP1R15AO75807 674 aaPredicted RBP7.29□□□□□ -1.24
LRRC49-221ENST00000560107 FAM50AQ14320 339 aaKnown RBP7.28□□□□□ -1.24
LRRC49-221ENST00000560107 PHLDB1Q86UU1 1377 aa7.27□□□□□ -1.25
LRRC49-221ENST00000560107 TRIM52Q96A61 297 aa7.27□□□□□ -1.25
LRRC49-221ENST00000560107 LRRC9Q6ZRR7 1453 aa7.26□□□□□ -1.25
LRRC49-221ENST00000560107 RBM19Q9Y4C8 960 aaKnown RBP7.26□□□□□ -1.25
LRRC49-221ENST00000560107 NEFLP07196 543 aa7.26□□□□□ -1.25
LRRC49-221ENST00000560107 MAP3K1Q13233 1512 aa7.25□□□□□ -1.25
LRRC49-221ENST00000560107 IGF1RP08069 1367 aa7.25□□□□□ -1.25
LRRC49-221ENST00000560107 CFTRP13569 1480 aa7.24□□□□□ -1.25
LRRC49-221ENST00000560107 CCER2I3L3R5 266 aa7.24□□□□□ -1.25
LRRC49-221ENST00000560107 ANP32CO43423 234 aa7.24□□□□□ -1.25
LRRC49-221ENST00000560107 NCAPD3P42695 1498 aa7.24□□□□□ -1.25
LRRC49-221ENST00000560107 HMGXB3Q12766 1538 aa7.23□□□□□ -1.25
LRRC49-221ENST00000560107 P3H3Q8IVL6 736 aa7.23□□□□□ -1.25
LRRC49-221ENST00000560107 ATP1B4Q9UN42 357 aaPredicted RBP7.23□□□□□ -1.25
LRRC49-221ENST00000560107 TIMELESSQ9UNS1 1208 aa7.23□□□□□ -1.25
LRRC49-221ENST00000560107 CARMIL1Q5VZK9 1371 aa7.22□□□□□ -1.25
LRRC49-221ENST00000560107 ARXQ96QS3 562 aa7.21□□□□□ -1.26
LRRC49-221ENST00000560107 CFAP43Q8NDM7 1665 aa7.21□□□□□ -1.26
LRRC49-221ENST00000560107 KLHL34Q8N239 644 aa7.21□□□□□ -1.26
LRRC49-221ENST00000560107 PCF11O94913 1555 aaKnown RBP7.2□□□□□ -1.26
LRRC49-221ENST00000560107 FHAD1B1AJZ9 1412 aa7.2□□□□□ -1.26
LRRC49-221ENST00000560107 TONSLQ96HA7 1378 aa7.18□□□□□ -1.26
LRRC49-221ENST00000560107 FHOD3Q2V2M9 1422 aa7.18□□□□□ -1.26
LRRC49-221ENST00000560107 FGD5Q6ZNL6 1462 aa7.17□□□□□ -1.26
LRRC49-221ENST00000560107 IRX6P78412 446 aaPredicted RBP7.17□□□□□ -1.26
LRRC49-221ENST00000560107 PRDM2Q13029 1718 aa7.17□□□□□ -1.26
LRRC49-221ENST00000560107 HNRNPUQ00839 825 aaKnown RBP eCLIP7.16□□□□□ -1.26
LRRC49-221ENST00000560107 PODXL2Q9NZ53 605 aa7.16□□□□□ -1.26
LRRC49-221ENST00000560107 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.15□□□□□ -1.26
LRRC49-221ENST00000560107 CCDC18Q5T9S5 1454 aa7.15□□□□□ -1.26
LRRC49-221ENST00000560107 FYCO1Q9BQS8 1478 aa7.15□□□□□ -1.26
LRRC49-221ENST00000560107 PTPRKQ15262 1439 aa7.14□□□□□ -1.27
LRRC49-221ENST00000560107 FGD6Q6ZV73 1430 aa7.14□□□□□ -1.27
LRRC49-221ENST00000560107 CASKIN1Q8WXD9 1431 aa7.14□□□□□ -1.27
LRRC49-221ENST00000560107 UACAQ9BZF9 1416 aa7.13□□□□□ -1.27
LRRC49-221ENST00000560107 CDK11AQ9UQ88 783 aaPredicted RBP7.13□□□□□ -1.27
LRRC49-221ENST00000560107 CADPSQ9ULU8 1353 aa7.13□□□□□ -1.27
LRRC49-221ENST00000560107 CACNB1Q02641 598 aaPredicted RBP7.13□□□□□ -1.27
LRRC49-221ENST00000560107 FANCIQ9NVI1 1328 aa7.12□□□□□ -1.27
LRRC49-221ENST00000560107 PTPN23Q9H3S7 1636 aa7.12□□□□□ -1.27
LRRC49-221ENST00000560107 HFM1A2PYH4 1435 aa7.12□□□□□ -1.27
LRRC49-221ENST00000560107 KDM5BQ9UGL1 1544 aa7.12□□□□□ -1.27
LRRC49-221ENST00000560107 AQRO60306 1485 aaKnown RBP eCLIP7.12□□□□□ -1.27
LRRC49-221ENST00000560107 WASHC2AQ641Q2 1341 aa7.11□□□□□ -1.27
LRRC49-221ENST00000560107 EFCAB5A4FU69 1503 aa7.11□□□□□ -1.27
LRRC49-221ENST00000560107 NAIPQ13075 1403 aa7.11□□□□□ -1.27
LRRC49-221ENST00000560107 HSPA5P11021 654 aaKnown RBP7.11□□□□□ -1.27
LRRC49-221ENST00000560107 MTUS2Q5JR59 1369 aa7.11□□□□□ -1.27
LRRC49-221ENST00000560107 CCDC184Q52MB2 194 aa7.1□□□□□ -1.27
LRRC49-221ENST00000560107 RAD54L2Q9Y4B4 1467 aa7.1□□□□□ -1.27
LRRC49-221ENST00000560107 UBE2Q2Q8WVN8 375 aa7.1□□□□□ -1.27
LRRC49-221ENST00000560107 SNAPC4Q5SXM2 1469 aa7.09□□□□□ -1.27
LRRC49-221ENST00000560107 FMN1Q68DA7 1419 aa7.09□□□□□ -1.27
LRRC49-221ENST00000560107 CTTNBP2Q8WZ74 1663 aa7.09□□□□□ -1.27
LRRC49-221ENST00000560107 LRRIQ1Q96JM4 1722 aa7.08□□□□□ -1.28
LRRC49-221ENST00000560107 PPP4R2Q9NY27 417 aa7.08□□□□□ -1.28
LRRC49-221ENST00000560107 NCOA2Q15596 1464 aa7.08□□□□□ -1.28
LRRC49-221ENST00000560107 RRP7BPQ9NSQ0 103 aa7.07□□□□□ -1.28
LRRC49-221ENST00000560107 MYOM3Q5VTT5 1437 aa7.07□□□□□ -1.28
LRRC49-221ENST00000560107 FANCD2Q9BXW9 1451 aa7.07□□□□□ -1.28
LRRC49-221ENST00000560107 ABCA10Q8WWZ4 1543 aa7.07□□□□□ -1.28
LRRC49-221ENST00000560107 C11orf95C9JLR9 678 aaPredicted RBP7.07□□□□□ -1.28
LRRC49-221ENST00000560107 EIF4G2P78344 907 aaKnown RBP eCLIP7.07□□□□□ -1.28
LRRC49-221ENST00000560107 ERICH6BQ5W0A0 696 aa7.07□□□□□ -1.28
LRRC49-221ENST00000560107 B4GALNT3Q6L9W6 998 aa7.07□□□□□ -1.28
LRRC49-221ENST00000560107 FAM9BQ8IZU0 186 aa7.07□□□□□ -1.28
LRRC49-221ENST00000560107 CHIC2Q9UKJ5 165 aa7.07□□□□□ -1.28
LRRC49-221ENST00000560107 POLA1P09884 1462 aaPredicted RBP7.06□□□□□ -1.28
LRRC49-221ENST00000560107 CC2D2AQ9P2K1 1620 aa7.06□□□□□ -1.28
LRRC49-221ENST00000560107 CNTLNQ9NXG0 1405 aa7.06□□□□□ -1.28
LRRC49-221ENST00000560107 DENND4BO75064 1496 aaPredicted RBP7.06□□□□□ -1.28
LRRC49-221ENST00000560107 CUL7Q14999 1698 aa7.06□□□□□ -1.28
LRRC49-221ENST00000560107 PRKRIP1Q9H875 184 aaPredicted RBP7.05□□□□□ -1.28
LRRC49-221ENST00000560107 DNMBPQ6XZF7 1577 aa7.05□□□□□ -1.28
LRRC49-221ENST00000560107 SUPT6HQ7KZ85 1726 aaKnown RBP7.05□□□□□ -1.28
LRRC49-221ENST00000560107 TULP1O00294 542 aaPredicted RBP7.04□□□□□ -1.28
LRRC49-221ENST00000560107 L3MBTL2Q969R5 705 aa7.04□□□□□ -1.28
LRRC49-221ENST00000560107 MRS2Q9HD23 443 aa7.04□□□□□ -1.28
LRRC49-221ENST00000560107 GRIN2BQ13224 1484 aa7.04□□□□□ -1.28
LRRC49-221ENST00000560107 TOPBP1Q92547 1522 aa7.04□□□□□ -1.28
LRRC49-221ENST00000560107 KDM6BO15054 1643 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms