RNA–Protein interactions for RNA: ENST00000559982.1

TMC3-203, Transcript of transmembrane channel like 3, humanhuman

TSL 5

Gene TMC3, Length 2,446 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-203ENST00000559982 GAPVD1Q14C86 1478 aa12.9□□□□□ -0.34
TMC3-203ENST00000559982 CHD1O14646 1710 aa12.9□□□□□ -0.34
TMC3-203ENST00000559982 SNAPC4Q5SXM2 1469 aa12.9□□□□□ -0.34
TMC3-203ENST00000559982 OSCARQ8IYS5 282 aa12.9□□□□□ -0.34
TMC3-203ENST00000559982 MAGI1Q96QZ7 1491 aaPredicted RBP12.89□□□□□ -0.35
TMC3-203ENST00000559982 TNIKQ9UKE5 1360 aa12.89□□□□□ -0.35
TMC3-203ENST00000559982 UBTFP17480 764 aaKnown RBP12.88□□□□□ -0.35
TMC3-203ENST00000559982 KIF21BO75037 1637 aa12.88□□□□□ -0.35
TMC3-203ENST00000559982 SYNJ2O15056 1496 aa12.83□□□□□ -0.35
TMC3-203ENST00000559982 KIF27Q86VH2 1401 aa12.83□□□□□ -0.36
TMC3-203ENST00000559982 ERICH3Q5RHP9 1530 aa12.81□□□□□ -0.36
TMC3-203ENST00000559982 FBLN2P98095 1184 aa12.81□□□□□ -0.36
TMC3-203ENST00000559982 ADAMTS12P58397 1594 aa12.81□□□□□ -0.36
TMC3-203ENST00000559982 CHMP7Q8WUX9 453 aaPredicted RBP12.78□□□□□ -0.36
TMC3-203ENST00000559982 RAPGEF2Q9Y4G8 1499 aa12.77□□□□□ -0.37
TMC3-203ENST00000559982 CLASP1Q7Z460 1538 aa12.77□□□□□ -0.37
TMC3-203ENST00000559982 FHAD1B1AJZ9 1412 aa12.76□□□□□ -0.37
TMC3-203ENST00000559982 GRIN2AQ12879 1464 aa12.75□□□□□ -0.37
TMC3-203ENST00000559982 PRXQ9BXM0 1461 aa12.75□□□□□ -0.37
TMC3-203ENST00000559982 RIMBP3CA6NJZ7 1639 aa12.75□□□□□ -0.37
TMC3-203ENST00000559982 RIMBP3BA6NNM3 1639 aa12.75□□□□□ -0.37
TMC3-203ENST00000559982 RIMBP3Q9UFD9 1639 aa12.75□□□□□ -0.37
TMC3-203ENST00000559982 HNRNPUL2Q1KMD3 747 aaKnown RBP12.74□□□□□ -0.37
TMC3-203ENST00000559982 ARHGEF11O15085 1522 aa12.73□□□□□ -0.37
TMC3-203ENST00000559982 CLIP1P30622 1438 aa12.72□□□□□ -0.37
TMC3-203ENST00000559982 CUL7Q14999 1698 aa12.7□□□□□ -0.38
TMC3-203ENST00000559982 SUPT16HQ9Y5B9 1047 aaKnown RBP12.7□□□□□ -0.38
TMC3-203ENST00000559982 NUP160Q12769 1436 aa12.7□□□□□ -0.38
TMC3-203ENST00000559982 CEP170Q5SW79 1584 aa12.69□□□□□ -0.38
TMC3-203ENST00000559982 IGF1RP08069 1367 aa12.68□□□□□ -0.38
TMC3-203ENST00000559982 TSHZ2Q9NRE2 1034 aa12.63□□□□□ -0.39
TMC3-203ENST00000559982 ARAP1Q96P48 1450 aa12.63□□□□□ -0.39
TMC3-203ENST00000559982 SHROOM2Q13796 1616 aa12.63□□□□□ -0.39
TMC3-203ENST00000559982 CARMIL1Q5VZK9 1371 aa12.63□□□□□ -0.39
TMC3-203ENST00000559982 RANGAP1P46060 587 aaPredicted RBP12.62□□□□□ -0.39
TMC3-203ENST00000559982 VPS8Q8N3P4 1428 aa12.62□□□□□ -0.39
TMC3-203ENST00000559982 APLP2Q06481 763 aa12.59□□□□□ -0.39
TMC3-203ENST00000559982 DHX57Q6P158 1386 aaKnown RBP12.57□□□□□ -0.4
TMC3-203ENST00000559982 ERCC6L2Q5T890 1561 aa12.56□□□□□ -0.4
TMC3-203ENST00000559982 KIAA0586Q9BVV6 1533 aa12.56□□□□□ -0.4
TMC3-203ENST00000559982 CYB5RLQ6IPT4 315 aa12.56□□□□□ -0.4
TMC3-203ENST00000559982 ANP32EQ9BTT0 268 aa12.53□□□□□ -0.4
TMC3-203ENST00000559982 CLSPNQ9HAW4 1339 aa12.53□□□□□ -0.4
TMC3-203ENST00000559982 KCNH8Q96L42 1107 aa12.52□□□□□ -0.4
TMC3-203ENST00000559982 PRG4Q92954 1404 aaPredicted RBP12.52□□□□□ -0.4
TMC3-203ENST00000559982 JPH4Q96JJ6 628 aa12.51□□□□□ -0.41
TMC3-203ENST00000559982 IQGAP2Q13576 1575 aa12.5□□□□□ -0.41
TMC3-203ENST00000559982 ARHGAP35Q9NRY4 1499 aa12.49□□□□□ -0.41
TMC3-203ENST00000559982 CTTNBP2Q8WZ74 1663 aa12.46□□□□□ -0.41
TMC3-203ENST00000559982 BCL11AQ9H165 835 aa12.46□□□□□ -0.41
TMC3-203ENST00000559982 UGGT2Q9NYU1 1516 aa12.43□□□□□ -0.42
TMC3-203ENST00000559982 KANK4Q5T7N3 995 aaPredicted RBP12.43□□□□□ -0.42
TMC3-203ENST00000559982 EFCAB5A4FU69 1503 aa12.42□□□□□ -0.42
TMC3-203ENST00000559982 CARMIL2Q6F5E8 1435 aa12.41□□□□□ -0.42
TMC3-203ENST00000559982 DISP1Q96F81 1524 aa12.4□□□□□ -0.42
TMC3-203ENST00000559982 BCANQ96GW7 911 aa12.4□□□□□ -0.42
TMC3-203ENST00000559982 KIAA0556O60303 1618 aa12.38□□□□□ -0.43
TMC3-203ENST00000559982 RRBP1Q9P2E9 1410 aaKnown RBP12.37□□□□□ -0.43
TMC3-203ENST00000559982 ADCY10Q96PN6 1610 aa12.37□□□□□ -0.43
TMC3-203ENST00000559982 PTPRGP23470 1445 aa12.36□□□□□ -0.43
TMC3-203ENST00000559982 MAPKBP1O60336 1514 aa12.35□□□□□ -0.43
TMC3-203ENST00000559982 MAP3K1Q13233 1512 aa12.35□□□□□ -0.43
TMC3-203ENST00000559982 P3H3Q8IVL6 736 aa12.35□□□□□ -0.43
TMC3-203ENST00000559982 FHOD3Q2V2M9 1422 aa12.34□□□□□ -0.43
TMC3-203ENST00000559982 FMN1Q68DA7 1419 aa12.33□□□□□ -0.43
TMC3-203ENST00000559982 FKBP8Q14318 412 aa12.33□□□□□ -0.44
TMC3-203ENST00000559982 TIAM1Q13009 1591 aa12.32□□□□□ -0.44
TMC3-203ENST00000559982 FYCO1Q9BQS8 1478 aa12.32□□□□□ -0.44
TMC3-203ENST00000559982 PCF11O94913 1555 aaKnown RBP12.31□□□□□ -0.44
TMC3-203ENST00000559982 TRHP20396 242 aaPredicted RBP12.31□□□□□ -0.44
TMC3-203ENST00000559982 UHRF1BP1LA0JNW5 1464 aa12.31□□□□□ -0.44
TMC3-203ENST00000559982 SAMD9Q5K651 1589 aa12.3□□□□□ -0.44
TMC3-203ENST00000559982 RBM19Q9Y4C8 960 aaKnown RBP12.3□□□□□ -0.44
TMC3-203ENST00000559982 ATP1B4Q9UN42 357 aaPredicted RBP12.29□□□□□ -0.44
TMC3-203ENST00000559982 CASKIN1Q8WXD9 1431 aa12.29□□□□□ -0.44
TMC3-203ENST00000559982 UACAQ9BZF9 1416 aa12.29□□□□□ -0.44
TMC3-203ENST00000559982 ABCC2Q92887 1545 aa12.29□□□□□ -0.44
TMC3-203ENST00000559982 MSH5O43196 834 aa12.28□□□□□ -0.44
TMC3-203ENST00000559982 NPM1P06748 294 aaKnown RBP eCLIP12.28□□□□□ -0.44
TMC3-203ENST00000559982 CFAP43Q8NDM7 1665 aa12.27□□□□□ -0.45
TMC3-203ENST00000559982 LRRC9Q6ZRR7 1453 aa12.27□□□□□ -0.45
TMC3-203ENST00000559982 CCNB3Q8WWL7 1395 aa12.27□□□□□ -0.45
TMC3-203ENST00000559982 RAB3GAP2Q9H2M9 1393 aa12.26□□□□□ -0.45
TMC3-203ENST00000559982 ABCA8O94911 1581 aa12.25□□□□□ -0.45
TMC3-203ENST00000559982 DDX10Q13206 875 aaKnown RBP12.25□□□□□ -0.45
TMC3-203ENST00000559982 KIF13AQ9H1H9 1805 aa12.25□□□□□ -0.45
TMC3-203ENST00000559982 PPP1R15AO75807 674 aaPredicted RBP12.25□□□□□ -0.45
TMC3-203ENST00000559982 ITGAEP38570 1179 aa12.25□□□□□ -0.45
TMC3-203ENST00000559982 KDM5BQ9UGL1 1544 aa12.24□□□□□ -0.45
TMC3-203ENST00000559982 PLB1Q6P1J6 1458 aa12.23□□□□□ -0.45
TMC3-203ENST00000559982 ZCCHC11Q5TAX3 1644 aaKnown RBP12.23□□□□□ -0.45
TMC3-203ENST00000559982 ABCC10Q5T3U5 1492 aa12.23□□□□□ -0.45
TMC3-203ENST00000559982 DIP2BQ9P265 1576 aa12.22□□□□□ -0.45
TMC3-203ENST00000559982 SIN3AQ96ST3 1273 aa12.21□□□□□ -0.46
TMC3-203ENST00000559982 ASXL2Q76L83 1435 aa12.2□□□□□ -0.46
TMC3-203ENST00000559982 TRIM52Q96A61 297 aa12.2□□□□□ -0.46
TMC3-203ENST00000559982 HIRIP3Q9BW71 556 aaPredicted RBP12.19□□□□□ -0.46
TMC3-203ENST00000559982 MTUS2Q5JR59 1369 aa12.18□□□□□ -0.46
TMC3-203ENST00000559982 RAPGEF6Q8TEU7 1601 aa12.18□□□□□ -0.46
TMC3-203ENST00000559982 CCDC18Q5T9S5 1454 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms