RNA–Protein interactions for RNA: ENST00000559971.5

APH1B-207, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 1 (best)

Gene APH1B, Length 1,455 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-207ENST00000559971 WDR97A6NE52 1622 aa24.06■■□□□ 1.44
APH1B-207ENST00000559971 URB2Q14146 1524 aaKnown RBP24.05■■□□□ 1.44
APH1B-207ENST00000559971 LRRC9Q6ZRR7 1453 aa24.04■■□□□ 1.44
APH1B-207ENST00000559971 FYCO1Q9BQS8 1478 aa24.03■■□□□ 1.44
APH1B-207ENST00000559971 FMN1Q68DA7 1419 aa24■■□□□ 1.43
APH1B-207ENST00000559971 CASKIN1Q8WXD9 1431 aa24■■□□□ 1.43
APH1B-207ENST00000559971 DHX57Q6P158 1386 aaKnown RBP24■■□□□ 1.43
APH1B-207ENST00000559971 CFAP43Q8NDM7 1665 aa24■■□□□ 1.43
APH1B-207ENST00000559971 CTTNBP2Q8WZ74 1663 aa24■■□□□ 1.43
APH1B-207ENST00000559971 ABCA5Q8WWZ7 1642 aa23.99■■□□□ 1.43
APH1B-207ENST00000559971 GAPVD1Q14C86 1478 aa23.96■■□□□ 1.43
APH1B-207ENST00000559971 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.96■■□□□ 1.43
APH1B-207ENST00000559971 CENPBP07199 599 aaPredicted RBP23.94■■□□□ 1.42
APH1B-207ENST00000559971 PCF11O94913 1555 aaKnown RBP23.91■■□□□ 1.42
APH1B-207ENST00000559971 FHOD3Q2V2M9 1422 aa23.85■■□□□ 1.41
APH1B-207ENST00000559971 THOC2Q8NI27 1593 aaKnown RBP23.85■■□□□ 1.41
APH1B-207ENST00000559971 SAMD9Q5K651 1589 aa23.83■■□□□ 1.41
APH1B-207ENST00000559971 TDRD9Q8NDG6 1382 aaKnown RBP23.83■■□□□ 1.41
APH1B-207ENST00000559971 SETD5Q9C0A6 1442 aa23.83■■□□□ 1.41
APH1B-207ENST00000559971 TARBP1Q13395 1621 aaKnown RBP23.81■■□□□ 1.4
APH1B-207ENST00000559971 KIF21AQ7Z4S6 1674 aa23.81■■□□□ 1.4
APH1B-207ENST00000559971 PHLDB1Q86UU1 1377 aa23.8■■□□□ 1.4
APH1B-207ENST00000559971 ACIN1Q9UKV3 1341 aaKnown RBP23.79■■□□□ 1.4
APH1B-207ENST00000559971 MRC2Q9UBG0 1479 aa23.78■■□□□ 1.4
APH1B-207ENST00000559971 RAB3GAP2Q9H2M9 1393 aa23.76■■□□□ 1.39
APH1B-207ENST00000559971 P3H3Q8IVL6 736 aa23.75■■□□□ 1.39
APH1B-207ENST00000559971 SNAPC4Q5SXM2 1469 aa23.75■■□□□ 1.39
APH1B-207ENST00000559971 TIMELESSQ9UNS1 1208 aa23.74■■□□□ 1.39
APH1B-207ENST00000559971 ATP1B4Q9UN42 357 aaPredicted RBP23.72■■□□□ 1.39
APH1B-207ENST00000559971 ERCC6Q03468 1493 aa23.69■■□□□ 1.38
APH1B-207ENST00000559971 MTUS2Q5JR59 1369 aa23.69■■□□□ 1.38
APH1B-207ENST00000559971 GRIN2BQ13224 1484 aa23.69■■□□□ 1.38
APH1B-207ENST00000559971 CCDC18Q5T9S5 1454 aa23.69■■□□□ 1.38
APH1B-207ENST00000559971 FAM50AQ14320 339 aaKnown RBP23.68■■□□□ 1.38
APH1B-207ENST00000559971 IFT140Q96RY7 1462 aa23.67■■□□□ 1.38
APH1B-207ENST00000559971 ITGAEP38570 1179 aa23.67■■□□□ 1.38
APH1B-207ENST00000559971 PBRM1Q86U86 1689 aa23.65■■□□□ 1.38
APH1B-207ENST00000559971 FGD6Q6ZV73 1430 aa23.65■■□□□ 1.38
APH1B-207ENST00000559971 SCAF1Q9H7N4 1312 aaKnown RBP23.65■■□□□ 1.38
APH1B-207ENST00000559971 EHBP1L1Q8N3D4 1523 aa23.65■■□□□ 1.38
APH1B-207ENST00000559971 ADAMTS12P58397 1594 aa23.62■■□□□ 1.37
APH1B-207ENST00000559971 IQGAP2Q13576 1575 aa23.6■■□□□ 1.37
APH1B-207ENST00000559971 WDR62O43379 1518 aa23.58■■□□□ 1.37
APH1B-207ENST00000559971 SUPT6HQ7KZ85 1726 aaKnown RBP23.58■■□□□ 1.36
APH1B-207ENST00000559971 MAPKBP1O60336 1514 aa23.57■■□□□ 1.36
APH1B-207ENST00000559971 HECW1Q76N89 1606 aa23.57■■□□□ 1.36
APH1B-207ENST00000559971 MYOM3Q5VTT5 1437 aa23.57■■□□□ 1.36
APH1B-207ENST00000559971 NEUROD1Q13562 356 aa23.56■■□□□ 1.36
APH1B-207ENST00000559971 UGGT2Q9NYU1 1516 aa23.55■■□□□ 1.36
APH1B-207ENST00000559971 NCOA2Q15596 1464 aa23.54■■□□□ 1.36
APH1B-207ENST00000559971 MIER1Q8N108 512 aa23.52■■□□□ 1.36
APH1B-207ENST00000559971 HFM1A2PYH4 1435 aa23.51■■□□□ 1.35
APH1B-207ENST00000559971 ARHGEF11O15085 1522 aa23.5■■□□□ 1.35
APH1B-207ENST00000559971 PELP1Q8IZL8 1130 aaKnown RBP23.49■■□□□ 1.35
APH1B-207ENST00000559971 KIAA0586Q9BVV6 1533 aa23.48■■□□□ 1.35
APH1B-207ENST00000559971 MIA2Q96PC5 1412 aa23.45■■□□□ 1.34
APH1B-207ENST00000559971 TCOF1Q13428 1488 aaKnown RBP23.45■■□□□ 1.34
APH1B-207ENST00000559971 AKNAQ7Z591 1439 aa23.43■■□□□ 1.34
APH1B-207ENST00000559971 UACAQ9BZF9 1416 aa23.43■■□□□ 1.34
APH1B-207ENST00000559971 EPRSP07814 1512 aaKnown RBP23.42■■□□□ 1.34
APH1B-207ENST00000559971 LRRIQ1Q96JM4 1722 aa23.42■■□□□ 1.34
APH1B-207ENST00000559971 PTPN23Q9H3S7 1636 aa23.39■■□□□ 1.34
APH1B-207ENST00000559971 MAGI1Q96QZ7 1491 aaPredicted RBP23.39■■□□□ 1.33
APH1B-207ENST00000559971 GRIN2AQ12879 1464 aa23.35■■□□□ 1.33
APH1B-207ENST00000559971 NAIPQ13075 1403 aa23.35■■□□□ 1.33
APH1B-207ENST00000559971 CDK11AQ9UQ88 783 aaPredicted RBP23.34■■□□□ 1.33
APH1B-207ENST00000559971 GTF3C3Q9Y5Q9 886 aa23.34■■□□□ 1.33
APH1B-207ENST00000559971 ZNF608Q9ULD9 1512 aaPredicted RBP23.33■■□□□ 1.33
APH1B-207ENST00000559971 KIAA0556O60303 1618 aa23.32■■□□□ 1.32
APH1B-207ENST00000559971 PPP1R15AO75807 674 aaPredicted RBP23.3■■□□□ 1.32
APH1B-207ENST00000559971 PTPRKQ15262 1439 aa23.3■■□□□ 1.32
APH1B-207ENST00000559971 EIF4G3O43432 1585 aaKnown RBP23.29■■□□□ 1.32
APH1B-207ENST00000559971 MAGI3Q5TCQ9 1506 aa23.29■■□□□ 1.32
APH1B-207ENST00000559971 DISP1Q96F81 1524 aa23.27■■□□□ 1.32
APH1B-207ENST00000559971 TONSLQ96HA7 1378 aa23.27■■□□□ 1.32
APH1B-207ENST00000559971 SYNJ2O15056 1496 aa23.27■■□□□ 1.32
APH1B-207ENST00000559971 SIN3AQ96ST3 1273 aa23.25■■□□□ 1.31
APH1B-207ENST00000559971 GCC2Q8IWJ2 1684 aa23.25■■□□□ 1.31
APH1B-207ENST00000559971 ROCK1Q13464 1354 aa23.24■■□□□ 1.31
APH1B-207ENST00000559971 YTHDC1Q96MU7 727 aaKnown RBP23.24■■□□□ 1.31
APH1B-207ENST00000559971 RAPGEF6Q8TEU7 1601 aa23.22■■□□□ 1.31
APH1B-207ENST00000559971 CARMIL2Q6F5E8 1435 aa23.22■■□□□ 1.31
APH1B-207ENST00000559971 CDK13Q14004 1512 aaKnown RBP23.2■■□□□ 1.3
APH1B-207ENST00000559971 CHMP7Q8WUX9 453 aaPredicted RBP23.19■■□□□ 1.3
APH1B-207ENST00000559971 NUP153P49790 1475 aaKnown RBP23.16■■□□□ 1.3
APH1B-207ENST00000559971 NUP160Q12769 1436 aa23.16■■□□□ 1.3
APH1B-207ENST00000559971 TROQ12816 1431 aaPredicted RBP23.13■■□□□ 1.29
APH1B-207ENST00000559971 DAPK1P53355 1430 aa23.09■■□□□ 1.29
APH1B-207ENST00000559971 DNMT1P26358 1616 aaKnown RBP23.09■■□□□ 1.29
APH1B-207ENST00000559971 CEP170Q5SW79 1584 aa23.09■■□□□ 1.29
APH1B-207ENST00000559971 RRP7BPQ9NSQ0 103 aa23.06■■□□□ 1.28
APH1B-207ENST00000559971 ITSN2Q9NZM3 1697 aa23.06■■□□□ 1.28
APH1B-207ENST00000559971 ADCY10Q96PN6 1610 aa23.05■■□□□ 1.28
APH1B-207ENST00000559971 JPH4Q96JJ6 628 aa23.05■■□□□ 1.28
APH1B-207ENST00000559971 CCER2I3L3R5 266 aa23.04■■□□□ 1.28
APH1B-207ENST00000559971 TRIM52Q96A61 297 aa23.04■■□□□ 1.28
APH1B-207ENST00000559971 ABCC5O15440 1437 aa23.02■■□□□ 1.28
APH1B-207ENST00000559971 CHIC2Q9UKJ5 165 aa23.02■■□□□ 1.28
APH1B-207ENST00000559971 MPHOSPH9Q99550 1183 aa23■■□□□ 1.27
APH1B-207ENST00000559971 DDX10Q13206 875 aaKnown RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms