RNA–Protein interactions for RNA: ENST00000559670.5

LRRC49-218, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 527 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-218ENST00000559670 CHMP7Q8WUX9 453 aaPredicted RBP14.15□□□□□ -0.14
LRRC49-218ENST00000559670 KIF13AQ9H1H9 1805 aa14.13□□□□□ -0.15
LRRC49-218ENST00000559670 POLA1P09884 1462 aaPredicted RBP14.13□□□□□ -0.15
LRRC49-218ENST00000559670 KDM4FA0A1W2PPD8 638 aa14.13□□□□□ -0.15
LRRC49-218ENST00000559670 MAGI1Q96QZ7 1491 aaPredicted RBP14.12□□□□□ -0.15
LRRC49-218ENST00000559670 WDR97A6NE52 1622 aa14.11□□□□□ -0.15
LRRC49-218ENST00000559670 TDRD9Q8NDG6 1382 aaKnown RBP14.1□□□□□ -0.15
LRRC49-218ENST00000559670 SYNJ2O15056 1496 aa14.08□□□□□ -0.16
LRRC49-218ENST00000559670 RAD54L2Q9Y4B4 1467 aa14.08□□□□□ -0.16
LRRC49-218ENST00000559670 DSG3P32926 999 aa14.08□□□□□ -0.16
LRRC49-218ENST00000559670 SOGA1O94964 1423 aa14.04□□□□□ -0.16
LRRC49-218ENST00000559670 GRIN2BQ13224 1484 aa14.03□□□□□ -0.16
LRRC49-218ENST00000559670 CCDC88BA6NC98 1476 aa14.02□□□□□ -0.16
LRRC49-218ENST00000559670 ERCC6L2Q5T890 1561 aa14.01□□□□□ -0.17
LRRC49-218ENST00000559670 KDM6BO15054 1643 aa13.99□□□□□ -0.17
LRRC49-218ENST00000559670 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.97□□□□□ -0.17
LRRC49-218ENST00000559670 APLP2Q06481 763 aa13.97□□□□□ -0.17
LRRC49-218ENST00000559670 HNRNPUL2Q1KMD3 747 aaKnown RBP13.97□□□□□ -0.17
LRRC49-218ENST00000559670 HECW2Q9P2P5 1572 aa13.95□□□□□ -0.18
LRRC49-218ENST00000559670 PBRM1Q86U86 1689 aa13.95□□□□□ -0.18
LRRC49-218ENST00000559670 CEP170Q5SW79 1584 aa13.94□□□□□ -0.18
LRRC49-218ENST00000559670 ABCC10Q5T3U5 1492 aa13.93□□□□□ -0.18
LRRC49-218ENST00000559670 FGD5Q6ZNL6 1462 aa13.93□□□□□ -0.18
LRRC49-218ENST00000559670 FAM69CQ0P6D2 419 aa13.93□□□□□ -0.18
LRRC49-218ENST00000559670 SAMD1Q6SPF0 538 aaPredicted RBP13.92□□□□□ -0.18
LRRC49-218ENST00000559670 FBXO41Q8TF61 875 aa13.91□□□□□ -0.18
LRRC49-218ENST00000559670 ZNF219Q9P2Y4 722 aaPredicted RBP13.91□□□□□ -0.18
LRRC49-218ENST00000559670 DIP2BQ9P265 1576 aa13.89□□□□□ -0.19
LRRC49-218ENST00000559670 SLC4A1APQ9BWU0 796 aaKnown RBP13.89□□□□□ -0.19
LRRC49-218ENST00000559670 ADGRL1O94910 1474 aa13.87□□□□□ -0.19
LRRC49-218ENST00000559670 SHROOM2Q13796 1616 aa13.87□□□□□ -0.19
LRRC49-218ENST00000559670 MAPKBP1O60336 1514 aa13.86□□□□□ -0.19
LRRC49-218ENST00000559670 ABCB7O75027 752 aa13.85□□□□□ -0.19
LRRC49-218ENST00000559670 MYCNP04198 464 aaPredicted RBP13.85□□□□□ -0.19
LRRC49-218ENST00000559670 GRIN2AQ12879 1464 aa13.85□□□□□ -0.19
LRRC49-218ENST00000559670 NUP160Q12769 1436 aa13.83□□□□□ -0.2
LRRC49-218ENST00000559670 TSPOAP1O95153 1857 aa13.82□□□□□ -0.2
LRRC49-218ENST00000559670 ABCA5Q8WWZ7 1642 aa13.8□□□□□ -0.2
LRRC49-218ENST00000559670 NPM1P06748 294 aaKnown RBP eCLIP13.8□□□□□ -0.2
LRRC49-218ENST00000559670 LMTK3Q96Q04 1460 aa13.8□□□□□ -0.2
LRRC49-218ENST00000559670 CUX1P39880 1505 aa13.8□□□□□ -0.2
LRRC49-218ENST00000559670 EHMT2Q96KQ7 1210 aa13.78□□□□□ -0.2
LRRC49-218ENST00000559670 ADAMTS12P58397 1594 aa13.75□□□□□ -0.21
LRRC49-218ENST00000559670 PRG4Q92954 1404 aaPredicted RBP13.75□□□□□ -0.21
LRRC49-218ENST00000559670 ABCA10Q8WWZ4 1543 aa13.74□□□□□ -0.21
LRRC49-218ENST00000559670 FOXD4L1Q9NU39 408 aa13.73□□□□□ -0.21
LRRC49-218ENST00000559670 ADCY10Q96PN6 1610 aa13.72□□□□□ -0.21
LRRC49-218ENST00000559670 SOCS7O14512 581 aa13.68□□□□□ -0.22
LRRC49-218ENST00000559670 FHAD1B1AJZ9 1412 aa13.67□□□□□ -0.22
LRRC49-218ENST00000559670 JPH4Q96JJ6 628 aa13.65□□□□□ -0.22
LRRC49-218ENST00000559670 PPRC1Q5VV67 1664 aaKnown RBP13.64□□□□□ -0.23
LRRC49-218ENST00000559670 TOP2BQ02880 1626 aa13.62□□□□□ -0.23
LRRC49-218ENST00000559670 ILDR2Q71H61 639 aa13.59□□□□□ -0.23
LRRC49-218ENST00000559670 RUSC2Q8N2Y8 1516 aa13.59□□□□□ -0.23
LRRC49-218ENST00000559670 ZBTB22O15209 634 aa13.58□□□□□ -0.24
LRRC49-218ENST00000559670 COL17A1Q9UMD9 1497 aaPredicted RBP13.58□□□□□ -0.24
LRRC49-218ENST00000559670 GLI2P10070 1586 aa13.58□□□□□ -0.24
LRRC49-218ENST00000559670 POLA2Q14181 598 aa13.57□□□□□ -0.24
LRRC49-218ENST00000559670 ERICH3Q5RHP9 1530 aa13.56□□□□□ -0.24
LRRC49-218ENST00000559670 ATF5Q9Y2D1 282 aaPredicted RBP13.55□□□□□ -0.24
LRRC49-218ENST00000559670 DISP3Q9P2K9 1392 aa13.55□□□□□ -0.24
LRRC49-218ENST00000559670 CSRNP3Q8WYN3 585 aa13.52□□□□□ -0.25
LRRC49-218ENST00000559670 WRNQ14191 1432 aaPredicted RBP eCLIP13.52□□□□□ -0.25
LRRC49-218ENST00000559670 PLB1Q6P1J6 1458 aa13.52□□□□□ -0.25
LRRC49-218ENST00000559670 TEX14Q8IWB6 1497 aa13.5□□□□□ -0.25
LRRC49-218ENST00000559670 ASXL2Q76L83 1435 aa13.5□□□□□ -0.25
LRRC49-218ENST00000559670 ABCC2Q92887 1545 aa13.49□□□□□ -0.25
LRRC49-218ENST00000559670 MAP3K4Q9Y6R4 1608 aa13.48□□□□□ -0.25
LRRC49-218ENST00000559670 CUL7Q14999 1698 aa13.44□□□□□ -0.26
LRRC49-218ENST00000559670 PTPRGP23470 1445 aa13.43□□□□□ -0.26
LRRC49-218ENST00000559670 POTEHQ6S545 545 aa13.42□□□□□ -0.26
LRRC49-218ENST00000559670 EPRSP07814 1512 aaKnown RBP13.42□□□□□ -0.26
LRRC49-218ENST00000559670 KIAA0586Q9BVV6 1533 aa13.41□□□□□ -0.26
LRRC49-218ENST00000559670 RBM42Q9BTD8 480 aaKnown RBP13.41□□□□□ -0.26
LRRC49-218ENST00000559670 KIF21BO75037 1637 aa13.41□□□□□ -0.26
LRRC49-218ENST00000559670 PCF11O94913 1555 aaKnown RBP13.41□□□□□ -0.26
LRRC49-218ENST00000559670 SPATA31D1Q6ZQQ2 1576 aa13.41□□□□□ -0.26
LRRC49-218ENST00000559670 BIVM-ERCC5R4GMW8 1640 aa13.4□□□□□ -0.26
LRRC49-218ENST00000559670 PTPRMP28827 1452 aa13.39□□□□□ -0.27
LRRC49-218ENST00000559670 CERKQ8TCT0 537 aa13.38□□□□□ -0.27
LRRC49-218ENST00000559670 UHRF1BP1LA0JNW5 1464 aa13.36□□□□□ -0.27
LRRC49-218ENST00000559670 TTBK1Q5TCY1 1321 aaPredicted RBP13.35□□□□□ -0.27
LRRC49-218ENST00000559670 ADAMTSL3P82987 1691 aa13.34□□□□□ -0.27
LRRC49-218ENST00000559670 TNIKQ9UKE5 1360 aa13.34□□□□□ -0.27
LRRC49-218ENST00000559670 CARMIL2Q6F5E8 1435 aa13.31□□□□□ -0.28
LRRC49-218ENST00000559670 KDM5BQ9UGL1 1544 aa13.31□□□□□ -0.28
LRRC49-218ENST00000559670 UACAQ9BZF9 1416 aa13.3□□□□□ -0.28
LRRC49-218ENST00000559670 ZCCHC11Q5TAX3 1644 aaKnown RBP13.29□□□□□ -0.28
LRRC49-218ENST00000559670 ATXN8OSP0DMR3 200 aa13.29□□□□□ -0.28
LRRC49-218ENST00000559670 ZBTB12Q9Y330 459 aaPredicted RBP13.29□□□□□ -0.28
LRRC49-218ENST00000559670 MAGI3Q5TCQ9 1506 aa13.29□□□□□ -0.28
LRRC49-218ENST00000559670 CFAP43Q8NDM7 1665 aa13.27□□□□□ -0.29
LRRC49-218ENST00000559670 WDR7Q9Y4E6 1490 aa13.25□□□□□ -0.29
LRRC49-218ENST00000559670 BCORL1Q5H9F3 1711 aa13.25□□□□□ -0.29
LRRC49-218ENST00000559670 MADDQ8WXG6 1647 aa13.24□□□□□ -0.29
LRRC49-218ENST00000559670 CD109Q6YHK3 1445 aa13.24□□□□□ -0.29
LRRC49-218ENST00000559670 HSPA2P54652 639 aa13.23□□□□□ -0.29
LRRC49-218ENST00000559670 ARAP3Q8WWN8 1544 aa13.2□□□□□ -0.3
LRRC49-218ENST00000559670 IQGAP2Q13576 1575 aa13.19□□□□□ -0.3
LRRC49-218ENST00000559670 RIMS1Q86UR5 1692 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms