RNA–Protein interactions for RNA: ENST00000558903.1

CHRNA3-203, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 573 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-203ENST00000558903 ADAMTS12P58397 1594 aa9.88□□□□□ -0.83
CHRNA3-203ENST00000558903 CUL7Q14999 1698 aa9.88□□□□□ -0.83
CHRNA3-203ENST00000558903 ERICH3Q5RHP9 1530 aa9.87□□□□□ -0.83
CHRNA3-203ENST00000558903 TRIM41Q8WV44 630 aa9.86□□□□□ -0.83
CHRNA3-203ENST00000558903 SYNJ2O15056 1496 aa9.85□□□□□ -0.83
CHRNA3-203ENST00000558903 KIF27Q86VH2 1401 aa9.85□□□□□ -0.83
CHRNA3-203ENST00000558903 SLC4A2P04920 1241 aa9.83□□□□□ -0.84
CHRNA3-203ENST00000558903 CHMP7Q8WUX9 453 aaPredicted RBP9.83□□□□□ -0.84
CHRNA3-203ENST00000558903 OSCARQ8IYS5 282 aa9.82□□□□□ -0.84
CHRNA3-203ENST00000558903 MYCNP04198 464 aaPredicted RBP9.8□□□□□ -0.84
CHRNA3-203ENST00000558903 DNAJC5Q9H3Z4 198 aa9.8□□□□□ -0.84
CHRNA3-203ENST00000558903 FHAD1B1AJZ9 1412 aa9.8□□□□□ -0.84
CHRNA3-203ENST00000558903 GRIN2AQ12879 1464 aa9.79□□□□□ -0.84
CHRNA3-203ENST00000558903 DCAF8L1A6NGE4 600 aa9.77□□□□□ -0.85
CHRNA3-203ENST00000558903 RIMBP3CA6NJZ7 1639 aa9.77□□□□□ -0.85
CHRNA3-203ENST00000558903 RIMBP3BA6NNM3 1639 aa9.77□□□□□ -0.85
CHRNA3-203ENST00000558903 RIMBP3Q9UFD9 1639 aa9.77□□□□□ -0.85
CHRNA3-203ENST00000558903 CTTNBP2Q8WZ74 1663 aa9.77□□□□□ -0.85
CHRNA3-203ENST00000558903 CEP170Q5SW79 1584 aa9.76□□□□□ -0.85
CHRNA3-203ENST00000558903 CLASP1Q7Z460 1538 aa9.76□□□□□ -0.85
CHRNA3-203ENST00000558903 ATXN8OSP0DMR3 200 aa9.75□□□□□ -0.85
CHRNA3-203ENST00000558903 RUSC2Q8N2Y8 1516 aa9.74□□□□□ -0.85
CHRNA3-203ENST00000558903 ARHGEF11O15085 1522 aa9.72□□□□□ -0.85
CHRNA3-203ENST00000558903 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.71□□□□□ -0.86
CHRNA3-203ENST00000558903 EEA1Q15075 1411 aa9.71□□□□□ -0.86
CHRNA3-203ENST00000558903 CARMIL1Q5VZK9 1371 aa9.7□□□□□ -0.86
CHRNA3-203ENST00000558903 RAPGEF2Q9Y4G8 1499 aa9.7□□□□□ -0.86
CHRNA3-203ENST00000558903 IGF1RP08069 1367 aa9.69□□□□□ -0.86
CHRNA3-203ENST00000558903 NUP160Q12769 1436 aa9.69□□□□□ -0.86
CHRNA3-203ENST00000558903 SHROOM2Q13796 1616 aa9.69□□□□□ -0.86
CHRNA3-203ENST00000558903 IQGAP2Q13576 1575 aa9.68□□□□□ -0.86
CHRNA3-203ENST00000558903 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.68□□□□□ -0.86
CHRNA3-203ENST00000558903 HNRNPUL2Q1KMD3 747 aaKnown RBP9.68□□□□□ -0.86
CHRNA3-203ENST00000558903 FAM9AQ8IZU1 332 aaPredicted RBP9.66□□□□□ -0.86
CHRNA3-203ENST00000558903 KIF21BO75037 1637 aa9.65□□□□□ -0.86
CHRNA3-203ENST00000558903 KIAA0586Q9BVV6 1533 aa9.64□□□□□ -0.87
CHRNA3-203ENST00000558903 ARAP1Q96P48 1450 aa9.61□□□□□ -0.87
CHRNA3-203ENST00000558903 SAMD1Q6SPF0 538 aaPredicted RBP9.61□□□□□ -0.87
CHRNA3-203ENST00000558903 PRG4Q92954 1404 aaPredicted RBP9.61□□□□□ -0.87
CHRNA3-203ENST00000558903 ERCC6L2Q5T890 1561 aa9.61□□□□□ -0.87
CHRNA3-203ENST00000558903 PRXQ9BXM0 1461 aa9.6□□□□□ -0.87
CHRNA3-203ENST00000558903 CARMIL2Q6F5E8 1435 aa9.6□□□□□ -0.87
CHRNA3-203ENST00000558903 KIAA0556O60303 1618 aa9.58□□□□□ -0.88
CHRNA3-203ENST00000558903 CYB5RLQ6IPT4 315 aa9.58□□□□□ -0.88
CHRNA3-203ENST00000558903 GOLGA3Q08378 1498 aa9.58□□□□□ -0.88
CHRNA3-203ENST00000558903 JPH4Q96JJ6 628 aa9.57□□□□□ -0.88
CHRNA3-203ENST00000558903 TTBK1Q5TCY1 1321 aaPredicted RBP9.56□□□□□ -0.88
CHRNA3-203ENST00000558903 APLP2Q06481 763 aa9.56□□□□□ -0.88
CHRNA3-203ENST00000558903 UGGT2Q9NYU1 1516 aa9.56□□□□□ -0.88
CHRNA3-203ENST00000558903 UBTFP17480 764 aaKnown RBP9.53□□□□□ -0.88
CHRNA3-203ENST00000558903 U3KPZ7 1027 aaPredicted RBP9.53□□□□□ -0.88
CHRNA3-203ENST00000558903 RANGAP1P46060 587 aaPredicted RBP9.52□□□□□ -0.89
CHRNA3-203ENST00000558903 EFCAB5A4FU69 1503 aa9.51□□□□□ -0.89
CHRNA3-203ENST00000558903 TNIKQ9UKE5 1360 aa9.51□□□□□ -0.89
CHRNA3-203ENST00000558903 SAMD9Q5K651 1589 aa9.51□□□□□ -0.89
CHRNA3-203ENST00000558903 DISP1Q96F81 1524 aa9.51□□□□□ -0.89
CHRNA3-203ENST00000558903 ADCY10Q96PN6 1610 aa9.5□□□□□ -0.89
CHRNA3-203ENST00000558903 PTPRGP23470 1445 aa9.49□□□□□ -0.89
CHRNA3-203ENST00000558903 NPM1P06748 294 aaKnown RBP eCLIP9.49□□□□□ -0.89
CHRNA3-203ENST00000558903 ABCC2Q92887 1545 aa9.46□□□□□ -0.89
CHRNA3-203ENST00000558903 ZCCHC11Q5TAX3 1644 aaKnown RBP9.46□□□□□ -0.89
CHRNA3-203ENST00000558903 RAPGEF6Q8TEU7 1601 aa9.46□□□□□ -0.89
CHRNA3-203ENST00000558903 TRHP20396 242 aaPredicted RBP9.45□□□□□ -0.9
CHRNA3-203ENST00000558903 P3H3Q8IVL6 736 aa9.45□□□□□ -0.9
CHRNA3-203ENST00000558903 UACAQ9BZF9 1416 aa9.44□□□□□ -0.9
CHRNA3-203ENST00000558903 KIF13AQ9H1H9 1805 aa9.44□□□□□ -0.9
CHRNA3-203ENST00000558903 FHOD3Q2V2M9 1422 aa9.43□□□□□ -0.9
CHRNA3-203ENST00000558903 TSPOAP1O95153 1857 aa9.42□□□□□ -0.9
CHRNA3-203ENST00000558903 HECW1Q76N89 1606 aa9.42□□□□□ -0.9
CHRNA3-203ENST00000558903 ABCA8O94911 1581 aa9.42□□□□□ -0.9
CHRNA3-203ENST00000558903 MAPKBP1O60336 1514 aa9.41□□□□□ -0.9
CHRNA3-203ENST00000558903 UHRF1BP1LA0JNW5 1464 aa9.41□□□□□ -0.9
CHRNA3-203ENST00000558903 PLB1Q6P1J6 1458 aa9.41□□□□□ -0.9
CHRNA3-203ENST00000558903 FMN1Q68DA7 1419 aa9.39□□□□□ -0.91
CHRNA3-203ENST00000558903 DIP2BQ9P265 1576 aa9.38□□□□□ -0.91
CHRNA3-203ENST00000558903 ARHGAP35Q9NRY4 1499 aa9.38□□□□□ -0.91
CHRNA3-203ENST00000558903 CLIP1P30622 1438 aa9.38□□□□□ -0.91
CHRNA3-203ENST00000558903 ATP1B4Q9UN42 357 aaPredicted RBP9.37□□□□□ -0.91
CHRNA3-203ENST00000558903 PCF11O94913 1555 aaKnown RBP9.37□□□□□ -0.91
CHRNA3-203ENST00000558903 KDM5BQ9UGL1 1544 aa9.36□□□□□ -0.91
CHRNA3-203ENST00000558903 ARID3CA6NKF2 412 aa9.36□□□□□ -0.91
CHRNA3-203ENST00000558903 POTEDQ86YR6 584 aa9.36□□□□□ -0.91
CHRNA3-203ENST00000558903 CEP162Q5TB80 1403 aa9.35□□□□□ -0.91
CHRNA3-203ENST00000558903 ASXL2Q76L83 1435 aa9.35□□□□□ -0.91
CHRNA3-203ENST00000558903 LRRIQ1Q96JM4 1722 aa9.35□□□□□ -0.91
CHRNA3-203ENST00000558903 CFAP43Q8NDM7 1665 aa9.35□□□□□ -0.91
CHRNA3-203ENST00000558903 ATF5Q9Y2D1 282 aaPredicted RBP9.34□□□□□ -0.91
CHRNA3-203ENST00000558903 WDR7Q9Y4E6 1490 aa9.34□□□□□ -0.91
CHRNA3-203ENST00000558903 ABCC10Q5T3U5 1492 aa9.33□□□□□ -0.92
CHRNA3-203ENST00000558903 RNF39Q9H2S5 420 aa9.32□□□□□ -0.92
CHRNA3-203ENST00000558903 NUP153P49790 1475 aaKnown RBP9.32□□□□□ -0.92
CHRNA3-203ENST00000558903 FYCO1Q9BQS8 1478 aa9.32□□□□□ -0.92
CHRNA3-203ENST00000558903 CDK13Q14004 1512 aaKnown RBP9.31□□□□□ -0.92
CHRNA3-203ENST00000558903 MAP3K4Q9Y6R4 1608 aa9.31□□□□□ -0.92
CHRNA3-203ENST00000558903 FAM69CQ0P6D2 419 aa9.31□□□□□ -0.92
CHRNA3-203ENST00000558903 CCDC18Q5T9S5 1454 aa9.31□□□□□ -0.92
CHRNA3-203ENST00000558903 GLI2P10070 1586 aa9.31□□□□□ -0.92
CHRNA3-203ENST00000558903 MYO5CQ9NQX4 1742 aa9.31□□□□□ -0.92
CHRNA3-203ENST00000558903 KIF14Q15058 1648 aa9.31□□□□□ -0.92
CHRNA3-203ENST00000558903 ATP10BO94823 1461 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms