RNA–Protein interactions for RNA: ENST00000558863.5

ZEB1-214, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 5

Gene ZEB1, Length 1,355 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-214ENST00000558863 SHROOM2Q13796 1616 aa40.1■■■■■ 4.01
ZEB1-214ENST00000558863 IQGAP2Q13576 1575 aa40.06■■■■■ 4
ZEB1-214ENST00000558863 CTTNBP2Q8WZ74 1663 aa40.06■■■■■ 4
ZEB1-214ENST00000558863 JPH4Q96JJ6 628 aa40.05■■■■■ 4
ZEB1-214ENST00000558863 ARHGEF11O15085 1522 aa40.04■■■■■ 4
ZEB1-214ENST00000558863 GOLGA3Q08378 1498 aa40.02■■■■■ 4
ZEB1-214ENST00000558863 RIMBP3CA6NJZ7 1639 aa39.97■■■■□ 3.99
ZEB1-214ENST00000558863 RIMBP3BA6NNM3 1639 aa39.97■■■■□ 3.99
ZEB1-214ENST00000558863 RIMBP3Q9UFD9 1639 aa39.97■■■■□ 3.99
ZEB1-214ENST00000558863 PRG4Q92954 1404 aaPredicted RBP39.92■■■■□ 3.98
ZEB1-214ENST00000558863 UGGT2Q9NYU1 1516 aa39.88■■■■□ 3.97
ZEB1-214ENST00000558863 UBTFP17480 764 aaKnown RBP39.84■■■■□ 3.97
ZEB1-214ENST00000558863 CARMIL2Q6F5E8 1435 aa39.82■■■■□ 3.97
ZEB1-214ENST00000558863 ERCC6L2Q5T890 1561 aa39.8■■■■□ 3.96
ZEB1-214ENST00000558863 EHMT2Q96KQ7 1210 aa39.76■■■■□ 3.96
ZEB1-214ENST00000558863 ARAP1Q96P48 1450 aa39.74■■■■□ 3.95
ZEB1-214ENST00000558863 DISP1Q96F81 1524 aa39.7■■■■□ 3.95
ZEB1-214ENST00000558863 KIAA0556O60303 1618 aa39.66■■■■□ 3.94
ZEB1-214ENST00000558863 TNIKQ9UKE5 1360 aa39.62■■■■□ 3.93
ZEB1-214ENST00000558863 CYB5RLQ6IPT4 315 aa39.61■■■■□ 3.93
ZEB1-214ENST00000558863 SAMD9Q5K651 1589 aa39.57■■■■□ 3.92
ZEB1-214ENST00000558863 EFCAB5A4FU69 1503 aa39.55■■■■□ 3.92
ZEB1-214ENST00000558863 PTPRGP23470 1445 aa39.53■■■■□ 3.92
ZEB1-214ENST00000558863 RANGAP1P46060 587 aaPredicted RBP39.46■■■■□ 3.91
ZEB1-214ENST00000558863 LOC105371045A0A1W2PR82 267 aa39.41■■■■□ 3.9
ZEB1-214ENST00000558863 P3H3Q8IVL6 736 aa39.37■■■■□ 3.89
ZEB1-214ENST00000558863 TTBK1Q5TCY1 1321 aaPredicted RBP39.35■■■■□ 3.89
ZEB1-214ENST00000558863 ARHGAP35Q9NRY4 1499 aa39.34■■■■□ 3.89
ZEB1-214ENST00000558863 CLIP1P30622 1438 aa39.3■■■■□ 3.88
ZEB1-214ENST00000558863 FHOD3Q2V2M9 1422 aa39.3■■■■□ 3.88
ZEB1-214ENST00000558863 UACAQ9BZF9 1416 aa39.28■■■■□ 3.88
ZEB1-214ENST00000558863 UHRF1BP1LA0JNW5 1464 aa39.26■■■■□ 3.88
ZEB1-214ENST00000558863 ADCY10Q96PN6 1610 aa39.23■■■■□ 3.87
ZEB1-214ENST00000558863 CEP162Q5TB80 1403 aa39.23■■■■□ 3.87
ZEB1-214ENST00000558863 ABCC2Q92887 1545 aa39.22■■■■□ 3.87
ZEB1-214ENST00000558863 ABCA8O94911 1581 aa39.2■■■■□ 3.87
ZEB1-214ENST00000558863 FMN1Q68DA7 1419 aa39.19■■■■□ 3.86
ZEB1-214ENST00000558863 PLB1Q6P1J6 1458 aa39.18■■■■□ 3.86
ZEB1-214ENST00000558863 NPM1P06748 294 aaKnown RBP eCLIP39.15■■■■□ 3.86
ZEB1-214ENST00000558863 RAPGEF6Q8TEU7 1601 aa39.09■■■■□ 3.85
ZEB1-214ENST00000558863 KDM5BQ9UGL1 1544 aa39.04■■■■□ 3.84
ZEB1-214ENST00000558863 MAPKBP1O60336 1514 aa38.96■■■■□ 3.83
ZEB1-214ENST00000558863 NUP153P49790 1475 aaKnown RBP38.93■■■■□ 3.82
ZEB1-214ENST00000558863 ZCCHC11Q5TAX3 1644 aaKnown RBP38.92■■■■□ 3.82
ZEB1-214ENST00000558863 HECW1Q76N89 1606 aa38.92■■■■□ 3.82
ZEB1-214ENST00000558863 CASKIN1Q8WXD9 1431 aa38.89■■■■□ 3.82
ZEB1-214ENST00000558863 ATP10BO94823 1461 aa38.86■■■■□ 3.81
ZEB1-214ENST00000558863 FYCO1Q9BQS8 1478 aa38.84■■■■□ 3.81
ZEB1-214ENST00000558863 PCF11O94913 1555 aaKnown RBP38.83■■■■□ 3.81
ZEB1-214ENST00000558863 ASXL2Q76L83 1435 aa38.8■■■■□ 3.8
ZEB1-214ENST00000558863 ATP1B4Q9UN42 357 aaPredicted RBP38.8■■■■□ 3.8
ZEB1-214ENST00000558863 EPRSP07814 1512 aaKnown RBP38.76■■■■□ 3.8
ZEB1-214ENST00000558863 VPS8Q8N3P4 1428 aa38.75■■■■□ 3.79
ZEB1-214ENST00000558863 ARID3CA6NKF2 412 aa38.75■■■■□ 3.79
ZEB1-214ENST00000558863 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.74■■■■□ 3.79
ZEB1-214ENST00000558863 HNRNPUL2Q1KMD3 747 aaKnown RBP38.74■■■■□ 3.79
ZEB1-214ENST00000558863 CCDC18Q5T9S5 1454 aa38.73■■■■□ 3.79
ZEB1-214ENST00000558863 WDR7Q9Y4E6 1490 aa38.71■■■■□ 3.79
ZEB1-214ENST00000558863 ABCC10Q5T3U5 1492 aa38.69■■■■□ 3.78
ZEB1-214ENST00000558863 CDK13Q14004 1512 aaKnown RBP38.67■■■■□ 3.78
ZEB1-214ENST00000558863 TRHP20396 242 aaPredicted RBP38.67■■■■□ 3.78
ZEB1-214ENST00000558863 CDK11AQ9UQ88 783 aaPredicted RBP38.65■■■■□ 3.78
ZEB1-214ENST00000558863 PLEKHD1A6NEE1 506 aa38.62■■■■□ 3.77
ZEB1-214ENST00000558863 LRRIQ1Q96JM4 1722 aa38.61■■■■□ 3.77
ZEB1-214ENST00000558863 DIP2BQ9P265 1576 aa38.61■■■■□ 3.77
ZEB1-214ENST00000558863 FAM69CQ0P6D2 419 aa38.56■■■■□ 3.76
ZEB1-214ENST00000558863 GLI2P10070 1586 aa38.55■■■■□ 3.76
ZEB1-214ENST00000558863 KIF13AQ9H1H9 1805 aa38.54■■■■□ 3.76
ZEB1-214ENST00000558863 KCNH8Q96L42 1107 aa38.47■■■■□ 3.75
ZEB1-214ENST00000558863 TROQ12816 1431 aaPredicted RBP38.46■■■■□ 3.75
ZEB1-214ENST00000558863 MAP3K1Q13233 1512 aa38.41■■■■□ 3.74
ZEB1-214ENST00000558863 CFAP43Q8NDM7 1665 aa38.4■■■■□ 3.74
ZEB1-214ENST00000558863 TIAM1Q13009 1591 aa38.37■■■■□ 3.73
ZEB1-214ENST00000558863 ABCA9Q8IUA7 1624 aa38.36■■■■□ 3.73
ZEB1-214ENST00000558863 MAP3K4Q9Y6R4 1608 aa38.36■■■■□ 3.73
ZEB1-214ENST00000558863 APLP2Q06481 763 aa38.35■■■■□ 3.73
ZEB1-214ENST00000558863 KIF14Q15058 1648 aa38.34■■■■□ 3.73
ZEB1-214ENST00000558863 MTUS2Q5JR59 1369 aa38.34■■■■□ 3.73
ZEB1-214ENST00000558863 MAGI3Q5TCQ9 1506 aa38.33■■■■□ 3.73
ZEB1-214ENST00000558863 CD109Q6YHK3 1445 aa38.3■■■■□ 3.72
ZEB1-214ENST00000558863 EHBP1L1Q8N3D4 1523 aa38.29■■■■□ 3.72
ZEB1-214ENST00000558863 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.27■■■■□ 3.72
ZEB1-214ENST00000558863 TEX14Q8IWB6 1497 aa38.22■■■■□ 3.71
ZEB1-214ENST00000558863 LRRC9Q6ZRR7 1453 aa38.21■■■■□ 3.71
ZEB1-214ENST00000558863 TSPOAP1O95153 1857 aa38.2■■■■□ 3.71
ZEB1-214ENST00000558863 TTC37Q6PGP7 1564 aa38.2■■■■□ 3.71
ZEB1-214ENST00000558863 PPRC1Q5VV67 1664 aaKnown RBP38.16■■■■□ 3.7
ZEB1-214ENST00000558863 SUPT6HQ7KZ85 1726 aaKnown RBP38.11■■■■□ 3.69
ZEB1-214ENST00000558863 MYO5CQ9NQX4 1742 aa38.1■■■■□ 3.69
ZEB1-214ENST00000558863 PLCH2O75038 1416 aa38.1■■■■□ 3.69
ZEB1-214ENST00000558863 ARAP3Q8WWN8 1544 aa38.1■■■■□ 3.69
ZEB1-214ENST00000558863 KANK4Q5T7N3 995 aaPredicted RBP38.07■■■■□ 3.69
ZEB1-214ENST00000558863 PHLDB1Q86UU1 1377 aa38.05■■■■□ 3.68
ZEB1-214ENST00000558863 CFAP74Q9C0B2 1584 aa38.04■■■■□ 3.68
ZEB1-214ENST00000558863 NEO1Q92859 1461 aa38.03■■■■□ 3.68
ZEB1-214ENST00000558863 CCNB3Q8WWL7 1395 aa38.02■■■■□ 3.68
ZEB1-214ENST00000558863 NCOA2Q15596 1464 aa38.02■■■■□ 3.68
ZEB1-214ENST00000558863 FANCAO15360 1455 aa38■■■■□ 3.67
ZEB1-214ENST00000558863 PREX2Q70Z35 1606 aa38■■■■□ 3.67
ZEB1-214ENST00000558863 CDC42BPAQ5VT25 1732 aa37.97■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms