RNA–Protein interactions for RNA: ENST00000558170.6

ZEB2-225, Transcript of zinc finger E-box binding homeobox 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZEB2, Length 4,012 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2-225ENST00000558170 SETD5Q9C0A6 1442 aa20.46■□□□□ 0.87
ZEB2-225ENST00000558170 KIF21BO75037 1637 aa20.45■□□□□ 0.86
ZEB2-225ENST00000558170 CUX2O14529 1486 aa20.44■□□□□ 0.86
ZEB2-225ENST00000558170 SYNJ1O43426 1573 aa20.43■□□□□ 0.86
ZEB2-225ENST00000558170 MRS2Q9HD23 443 aa20.42■□□□□ 0.86
ZEB2-225ENST00000558170 CARMIL1Q5VZK9 1371 aa20.41■□□□□ 0.86
ZEB2-225ENST00000558170 RBM19Q9Y4C8 960 aaKnown RBP20.41■□□□□ 0.86
ZEB2-225ENST00000558170 SENP3-EIF4A1A0A087X0R7 540 aa20.4■□□□□ 0.86
ZEB2-225ENST00000558170 RTL5Q5HYW3 569 aaPredicted RBP20.39■□□□□ 0.86
ZEB2-225ENST00000558170 EIF4G2P78344 907 aaKnown RBP eCLIP20.36■□□□□ 0.851e-18■■■■□ 23.9
ZEB2-225ENST00000558170 FBLN2P98095 1184 aa20.35■□□□□ 0.85
ZEB2-225ENST00000558170 BICRAQ9NZM4 1560 aa20.34■□□□□ 0.85
ZEB2-225ENST00000558170 PPP1R15AO75807 674 aaPredicted RBP20.34■□□□□ 0.85
ZEB2-225ENST00000558170 ZNF777Q9ULD5 760 aaPredicted RBP20.33■□□□□ 0.84
ZEB2-225ENST00000558170 CCER2I3L3R5 266 aa20.32■□□□□ 0.84
ZEB2-225ENST00000558170 FHAD1B1AJZ9 1412 aa20.29■□□□□ 0.84
ZEB2-225ENST00000558170 TIMELESSQ9UNS1 1208 aa20.29■□□□□ 0.84
ZEB2-225ENST00000558170 ARAP1Q96P48 1450 aa20.29■□□□□ 0.84
ZEB2-225ENST00000558170 NBR1Q14596 966 aa20.28■□□□□ 0.84
ZEB2-225ENST00000558170 SALL2Q9Y467 1007 aaPredicted RBP20.27■□□□□ 0.84
ZEB2-225ENST00000558170 NPM2Q86SE8 214 aaKnown RBP20.26■□□□□ 0.83
ZEB2-225ENST00000558170 DAXXQ9UER7 740 aaPredicted RBP20.25■□□□□ 0.83
ZEB2-225ENST00000558170 EIF4G1Q04637 1599 aaKnown RBP20.25■□□□□ 0.83
ZEB2-225ENST00000558170 ANP32AP39687 249 aaKnown RBP20.24■□□□□ 0.83
ZEB2-225ENST00000558170 UNC13AQ9UPW8 1703 aa20.23■□□□□ 0.83
ZEB2-225ENST00000558170 CCDC136Q96JN2 1154 aa20.23■□□□□ 0.83
ZEB2-225ENST00000558170 B4GALNT3Q6L9W6 998 aa20.23■□□□□ 0.83
ZEB2-225ENST00000558170 ARHGAP35Q9NRY4 1499 aa20.21■□□□□ 0.83
ZEB2-225ENST00000558170 HSPA5P11021 654 aaKnown RBP20.19■□□□□ 0.82
ZEB2-225ENST00000558170 BCL11AQ9H165 835 aa20.19■□□□□ 0.82
ZEB2-225ENST00000558170 SLC4A1APQ9BWU0 796 aaKnown RBP20.19■□□□□ 0.82
ZEB2-225ENST00000558170 FHOD3Q2V2M9 1422 aa20.19■□□□□ 0.82
ZEB2-225ENST00000558170 FOXD1Q16676 465 aa20.18■□□□□ 0.82
ZEB2-225ENST00000558170 RRBP1Q9P2E9 1410 aaKnown RBP20.17■□□□□ 0.82
ZEB2-225ENST00000558170 TMC1Q8TDI8 760 aa20.17■□□□□ 0.82
ZEB2-225ENST00000558170 PHLDB1Q86UU1 1377 aa20.15■□□□□ 0.82
ZEB2-225ENST00000558170 PPP4R2Q9NY27 417 aa20.15■□□□□ 0.82
ZEB2-225ENST00000558170 PRXQ9BXM0 1461 aa20.13■□□□□ 0.81
ZEB2-225ENST00000558170 KDM2AQ9Y2K7 1162 aa20.12■□□□□ 0.81
ZEB2-225ENST00000558170 IGF1RP08069 1367 aa20.11■□□□□ 0.81
ZEB2-225ENST00000558170 CADPSQ9ULU8 1353 aa20.11■□□□□ 0.81
ZEB2-225ENST00000558170 ERICH3Q5RHP9 1530 aa20.06■□□□□ 0.8
ZEB2-225ENST00000558170 NCAPD3P42695 1498 aa20.05■□□□□ 0.8
ZEB2-225ENST00000558170 ZBTB47Q9UFB7 747 aaPredicted RBP20.05■□□□□ 0.8
ZEB2-225ENST00000558170 MYT1LQ9UL68 1186 aa20.05■□□□□ 0.8
ZEB2-225ENST00000558170 TOP2BQ02880 1626 aa20.03■□□□□ 0.8
ZEB2-225ENST00000558170 TDRD9Q8NDG6 1382 aaKnown RBP20.03■□□□□ 0.8
ZEB2-225ENST00000558170 LRRC9Q6ZRR7 1453 aa20.01■□□□□ 0.79
ZEB2-225ENST00000558170 L3MBTL2Q969R5 705 aa20■□□□□ 0.79
ZEB2-225ENST00000558170 WDR97A6NE52 1622 aa19.98■□□□□ 0.79
ZEB2-225ENST00000558170 MPHOSPH9Q99550 1183 aa19.98■□□□□ 0.79
ZEB2-225ENST00000558170 DNAJC5BQ9UF47 199 aa19.97■□□□□ 0.79
ZEB2-225ENST00000558170 FMN1Q68DA7 1419 aa19.96■□□□□ 0.79
ZEB2-225ENST00000558170 CUX1P39880 1505 aa19.95■□□□□ 0.78
ZEB2-225ENST00000558170 CCDC18Q5T9S5 1454 aa19.95■□□□□ 0.78
ZEB2-225ENST00000558170 NOP58Q9Y2X3 529 aaKnown RBP19.92■□□□□ 0.78
ZEB2-225ENST00000558170 FGD5Q6ZNL6 1462 aa19.91■□□□□ 0.78
ZEB2-225ENST00000558170 CFDP1Q9UEE9 299 aaPredicted RBP19.9■□□□□ 0.78
ZEB2-225ENST00000558170 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.89■□□□□ 0.772e-6■■□□□ 11.4
ZEB2-225ENST00000558170 CARD11Q9BXL7 1154 aa19.89■□□□□ 0.77
ZEB2-225ENST00000558170 FANCD2Q9BXW9 1451 aa19.88■□□□□ 0.77
ZEB2-225ENST00000558170 PRKRIP1Q9H875 184 aaPredicted RBP19.87■□□□□ 0.77
ZEB2-225ENST00000558170 FGD6Q6ZV73 1430 aa19.87■□□□□ 0.77
ZEB2-225ENST00000558170 DEKP35659 375 aaKnown RBP19.86■□□□□ 0.77
ZEB2-225ENST00000558170 RGL3Q3MIN7 710 aa19.86■□□□□ 0.77
ZEB2-225ENST00000558170 TSPY4P0CV99 314 aa19.86■□□□□ 0.77
ZEB2-225ENST00000558170 TSPY10P0CW01 314 aa19.86■□□□□ 0.77
ZEB2-225ENST00000558170 RAD54L2Q9Y4B4 1467 aa19.86■□□□□ 0.77
ZEB2-225ENST00000558170 CFTRP13569 1480 aa19.85■□□□□ 0.77
ZEB2-225ENST00000558170 CHMP7Q8WUX9 453 aaPredicted RBP19.85■□□□□ 0.77
ZEB2-225ENST00000558170 WASHC2AQ641Q2 1341 aa19.85■□□□□ 0.77
ZEB2-225ENST00000558170 NESP48681 1621 aa19.85■□□□□ 0.77
ZEB2-225ENST00000558170 TIAM1Q13009 1591 aa19.84■□□□□ 0.77
ZEB2-225ENST00000558170 ERICH6BQ5W0A0 696 aa19.84■□□□□ 0.77
ZEB2-225ENST00000558170 PEG3Q9GZU2 1588 aa19.8■□□□□ 0.76
ZEB2-225ENST00000558170 UACAQ9BZF9 1416 aa19.8■□□□□ 0.76
ZEB2-225ENST00000558170 CCDC184Q52MB2 194 aa19.8■□□□□ 0.76
ZEB2-225ENST00000558170 LAS1LQ9Y4W2 734 aaKnown RBP19.8■□□□□ 0.76
ZEB2-225ENST00000558170 PKD2Q13563 968 aa19.77■□□□□ 0.76
ZEB2-225ENST00000558170 FANCIQ9NVI1 1328 aa19.76■□□□□ 0.75
ZEB2-225ENST00000558170 CANXP27824 592 aaKnown RBP19.75■□□□□ 0.75
ZEB2-225ENST00000558170 MAPKBP1O60336 1514 aa19.75■□□□□ 0.75
ZEB2-225ENST00000558170 CC2D2AQ9P2K1 1620 aa19.75■□□□□ 0.75
ZEB2-225ENST00000558170 DCAF11Q8TEB1 546 aa19.74■□□□□ 0.75
ZEB2-225ENST00000558170 HMGXB3Q12766 1538 aa19.74■□□□□ 0.75
ZEB2-225ENST00000558170 PDS5BQ9NTI5 1447 aa19.74■□□□□ 0.75
ZEB2-225ENST00000558170 NUDCQ9Y266 331 aa19.73■□□□□ 0.75
ZEB2-225ENST00000558170 ZBED9Q6R2W3 1325 aa19.73■□□□□ 0.75
ZEB2-225ENST00000558170 CASKIN1Q8WXD9 1431 aa19.72■□□□□ 0.75
ZEB2-225ENST00000558170 MYOM3Q5VTT5 1437 aa19.71■□□□□ 0.75
ZEB2-225ENST00000558170 CC2D1BQ5T0F9 858 aaKnown RBP19.71■□□□□ 0.75
ZEB2-225ENST00000558170 RTN4Q9NQC3 1192 aaKnown RBP19.71■□□□□ 0.75
ZEB2-225ENST00000558170 PLEKHD1A6NEE1 506 aa19.7■□□□□ 0.74
ZEB2-225ENST00000558170 MSH5O43196 834 aa19.7■□□□□ 0.74
ZEB2-225ENST00000558170 WDR43Q15061 677 aaKnown RBP eCLIP19.68■□□□□ 0.74
ZEB2-225ENST00000558170 CCDC7Q96M83 1385 aa19.68■□□□□ 0.74
ZEB2-225ENST00000558170 NEFMP07197 916 aa19.67■□□□□ 0.74
ZEB2-225ENST00000558170 NCOA2Q15596 1464 aa19.67■□□□□ 0.74
ZEB2-225ENST00000558170 KIF7Q2M1P5 1343 aa19.67■□□□□ 0.74
ZEB2-225ENST00000558170 ERCC6Q03468 1493 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms