RNA–Protein interactions for RNA: ENST00000557772.5

ESR2-213, Transcript of estrogen receptor 2, humanhuman

TSL 1 (best) BASIC

Gene ESR2, Length 5,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESR2-213ENST00000557772 RUSC2Q8N2Y8 1516 aa17.62■□□□□ 0.41
ESR2-213ENST00000557772 EIF4G2P78344 907 aaKnown RBP eCLIP17.62■□□□□ 0.41
ESR2-213ENST00000557772 ERCC6Q03468 1493 aa17.62■□□□□ 0.41
ESR2-213ENST00000557772 TIMELESSQ9UNS1 1208 aa17.62■□□□□ 0.41
ESR2-213ENST00000557772 SCAF1Q9H7N4 1312 aaKnown RBP17.62■□□□□ 0.41
ESR2-213ENST00000557772 EIF4G1Q04637 1599 aaKnown RBP17.62■□□□□ 0.41
ESR2-213ENST00000557772 FMN1Q68DA7 1419 aa17.6■□□□□ 0.41
ESR2-213ENST00000557772 SETD5Q9C0A6 1442 aa17.6■□□□□ 0.41
ESR2-213ENST00000557772 HNRNPUQ00839 825 aaKnown RBP eCLIP17.6■□□□□ 0.41
ESR2-213ENST00000557772 KANK4Q5T7N3 995 aaPredicted RBP17.59■□□□□ 0.41
ESR2-213ENST00000557772 NPM1P06748 294 aaKnown RBP eCLIP17.58■□□□□ 0.4
ESR2-213ENST00000557772 FKBP8Q14318 412 aa17.58■□□□□ 0.4
ESR2-213ENST00000557772 CFDP1Q9UEE9 299 aaPredicted RBP17.57■□□□□ 0.4
ESR2-213ENST00000557772 NCAPD3P42695 1498 aa17.57■□□□□ 0.4
ESR2-213ENST00000557772 RTL5Q5HYW3 569 aaPredicted RBP17.52■□□□□ 0.4
ESR2-213ENST00000557772 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.52■□□□□ 0.4
ESR2-213ENST00000557772 FAM9BQ8IZU0 186 aa17.51■□□□□ 0.39
ESR2-213ENST00000557772 FANCD2Q9BXW9 1451 aa17.5■□□□□ 0.39
ESR2-213ENST00000557772 KIF21BO75037 1637 aa17.49■□□□□ 0.39
ESR2-213ENST00000557772 SIN3AQ96ST3 1273 aa17.49■□□□□ 0.39
ESR2-213ENST00000557772 HIRIP3Q9BW71 556 aaPredicted RBP17.48■□□□□ 0.39
ESR2-213ENST00000557772 MRS2Q9HD23 443 aa17.48■□□□□ 0.39
ESR2-213ENST00000557772 TDRD9Q8NDG6 1382 aaKnown RBP17.47■□□□□ 0.39
ESR2-213ENST00000557772 TMC1Q8TDI8 760 aa17.46■□□□□ 0.39
ESR2-213ENST00000557772 KDM2AQ9Y2K7 1162 aa17.45■□□□□ 0.38
ESR2-213ENST00000557772 RAB3GAP2Q9H2M9 1393 aa17.45■□□□□ 0.38
ESR2-213ENST00000557772 CANXP27824 592 aaKnown RBP17.43■□□□□ 0.38
ESR2-213ENST00000557772 NEFMP07197 916 aa17.41■□□□□ 0.38
ESR2-213ENST00000557772 FHOD3Q2V2M9 1422 aa17.41■□□□□ 0.38
ESR2-213ENST00000557772 CARMIL2Q6F5E8 1435 aa17.41■□□□□ 0.38
ESR2-213ENST00000557772 CHGAP10645 457 aaKnown RBP17.4■□□□□ 0.38
ESR2-213ENST00000557772 ERICH3Q5RHP9 1530 aa17.4■□□□□ 0.38
ESR2-213ENST00000557772 HMGXB3Q12766 1538 aa17.39■□□□□ 0.38
ESR2-213ENST00000557772 FGD5Q6ZNL6 1462 aa17.39■□□□□ 0.38
ESR2-213ENST00000557772 SYNJ1O43426 1573 aa17.39■□□□□ 0.37
ESR2-213ENST00000557772 KCNH8Q96L42 1107 aa17.37■□□□□ 0.37
ESR2-213ENST00000557772 IGF1RP08069 1367 aa17.37■□□□□ 0.37
ESR2-213ENST00000557772 CFTRP13569 1480 aa17.35■□□□□ 0.37
ESR2-213ENST00000557772 ANP32AP39687 249 aaKnown RBP17.35■□□□□ 0.37
ESR2-213ENST00000557772 TOP2BQ02880 1626 aa17.34■□□□□ 0.37
ESR2-213ENST00000557772 ESF1Q9H501 851 aaKnown RBP17.33■□□□□ 0.36
ESR2-213ENST00000557772 DHX57Q6P158 1386 aaKnown RBP17.31■□□□□ 0.36
ESR2-213ENST00000557772 STAG3Q9UJ98 1225 aa17.31■□□□□ 0.36
ESR2-213ENST00000557772 CCER2I3L3R5 266 aa17.31■□□□□ 0.36
ESR2-213ENST00000557772 WDR43Q15061 677 aaKnown RBP eCLIP17.31■□□□□ 0.36
ESR2-213ENST00000557772 CARD11Q9BXL7 1154 aa17.3■□□□□ 0.36
ESR2-213ENST00000557772 CCDC18Q5T9S5 1454 aa17.29■□□□□ 0.36
ESR2-213ENST00000557772 ZBTB47Q9UFB7 747 aaPredicted RBP17.28■□□□□ 0.36
ESR2-213ENST00000557772 BICRAQ9NZM4 1560 aa17.28■□□□□ 0.36
ESR2-213ENST00000557772 CDCA8Q53HL2 280 aa17.27■□□□□ 0.36
ESR2-213ENST00000557772 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.27■□□□□ 0.35
ESR2-213ENST00000557772 CCDC136Q96JN2 1154 aa17.25■□□□□ 0.35
ESR2-213ENST00000557772 GAPVD1Q14C86 1478 aa17.25■□□□□ 0.35
ESR2-213ENST00000557772 RGL3Q3MIN7 710 aa17.24■□□□□ 0.35
ESR2-213ENST00000557772 PPP1R15AO75807 674 aaPredicted RBP17.23■□□□□ 0.35
ESR2-213ENST00000557772 PEG3Q9GZU2 1588 aa17.22■□□□□ 0.35
ESR2-213ENST00000557772 MPHOSPH9Q99550 1183 aa17.22■□□□□ 0.35
ESR2-213ENST00000557772 PRXQ9BXM0 1461 aa17.22■□□□□ 0.35
ESR2-213ENST00000557772 RAD54L2Q9Y4B4 1467 aa17.22■□□□□ 0.35
ESR2-213ENST00000557772 ANKRD30AQ9BXX3 1397 aa17.22■□□□□ 0.35
ESR2-213ENST00000557772 SALL2Q9Y467 1007 aaPredicted RBP17.2■□□□□ 0.34
ESR2-213ENST00000557772 HSPA5P11021 654 aaKnown RBP17.19■□□□□ 0.34
ESR2-213ENST00000557772 CUX1P39880 1505 aa17.19■□□□□ 0.34
ESR2-213ENST00000557772 LRRC9Q6ZRR7 1453 aa17.16■□□□□ 0.34
ESR2-213ENST00000557772 PKD2Q13563 968 aa17.15■□□□□ 0.34
ESR2-213ENST00000557772 CASKIN1Q8WXD9 1431 aa17.15■□□□□ 0.34
ESR2-213ENST00000557772 KANK1Q14678 1352 aa17.15■□□□□ 0.34
ESR2-213ENST00000557772 KNSTRNQ9Y448 316 aa17.14■□□□□ 0.34
ESR2-213ENST00000557772 ARAP1Q96P48 1450 aa17.14■□□□□ 0.33
ESR2-213ENST00000557772 SLC24A1O60721 1099 aa17.14■□□□□ 0.33
ESR2-213ENST00000557772 IRX6P78412 446 aaPredicted RBP17.13■□□□□ 0.33
ESR2-213ENST00000557772 EFCAB5A4FU69 1503 aa17.12■□□□□ 0.33
ESR2-213ENST00000557772 DCAF11Q8TEB1 546 aa17.12■□□□□ 0.33
ESR2-213ENST00000557772 RRBP1Q9P2E9 1410 aaKnown RBP17.12■□□□□ 0.33
ESR2-213ENST00000557772 RSPH4AQ5TD94 716 aa17.12■□□□□ 0.33
ESR2-213ENST00000557772 NPM2Q86SE8 214 aaKnown RBP17.12■□□□□ 0.33
ESR2-213ENST00000557772 FYCO1Q9BQS8 1478 aa17.11■□□□□ 0.33
ESR2-213ENST00000557772 SUPT16HQ9Y5B9 1047 aaKnown RBP17.11■□□□□ 0.33
ESR2-213ENST00000557772 CC2D2AQ9P2K1 1620 aa17.11■□□□□ 0.33
ESR2-213ENST00000557772 UNC13AQ9UPW8 1703 aa17.1■□□□□ 0.33
ESR2-213ENST00000557772 FGD6Q6ZV73 1430 aa17.1■□□□□ 0.33
ESR2-213ENST00000557772 NUP155O75694 1391 aa17.09■□□□□ 0.33
ESR2-213ENST00000557772 JPH4Q96JJ6 628 aa17.09■□□□□ 0.33
ESR2-213ENST00000557772 TMF1P82094 1093 aa17.08■□□□□ 0.33
ESR2-213ENST00000557772 MYOM3Q5VTT5 1437 aa17.08■□□□□ 0.32
ESR2-213ENST00000557772 FOXD1Q16676 465 aa17.07■□□□□ 0.32
ESR2-213ENST00000557772 PPP4R2Q9NY27 417 aa17.06■□□□□ 0.32
ESR2-213ENST00000557772 PHLDB1Q86UU1 1377 aa17.06■□□□□ 0.32
ESR2-213ENST00000557772 DNMBPQ6XZF7 1577 aa17.06■□□□□ 0.32
ESR2-213ENST00000557772 TOPBP1Q92547 1522 aa17.05■□□□□ 0.32
ESR2-213ENST00000557772 UPF2Q9HAU5 1272 aaKnown RBP17.05■□□□□ 0.32
ESR2-213ENST00000557772 EFCAB2Q5VUJ9 269 aa17.05■□□□□ 0.32
ESR2-213ENST00000557772 CFAP53Q96M91 514 aa17.04■□□□□ 0.32
ESR2-213ENST00000557772 L3MBTL2Q969R5 705 aa17.03■□□□□ 0.32
ESR2-213ENST00000557772 GRIN2BQ13224 1484 aa17.02■□□□□ 0.31
ESR2-213ENST00000557772 POLA1P09884 1462 aaPredicted RBP17■□□□□ 0.31
ESR2-213ENST00000557772 UACAQ9BZF9 1416 aa16.99■□□□□ 0.31
ESR2-213ENST00000557772 ROCK2O75116 1388 aaKnown RBP16.99■□□□□ 0.31
ESR2-213ENST00000557772 NCOA2Q15596 1464 aa16.99■□□□□ 0.31
ESR2-213ENST00000557772 TIAM1Q13009 1591 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms