RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 TARBP1Q13395 1621 aaKnown RBP13.09□□□□□ -0.31
SPTLC2-206ENST00000557566 DNMBPQ6XZF7 1577 aa13.07□□□□□ -0.32
SPTLC2-206ENST00000557566 CLASP1Q7Z460 1538 aa13.07□□□□□ -0.32
SPTLC2-206ENST00000557566 SYNJ1O43426 1573 aa13.03□□□□□ -0.32
SPTLC2-206ENST00000557566 POLA1P09884 1462 aaPredicted RBP12.97□□□□□ -0.33
SPTLC2-206ENST00000557566 SNAPC4Q5SXM2 1469 aa12.97□□□□□ -0.33
SPTLC2-206ENST00000557566 ILDR1Q86SU0 546 aaPredicted RBP12.97□□□□□ -0.33
SPTLC2-206ENST00000557566 GAPVD1Q14C86 1478 aa12.97□□□□□ -0.33
SPTLC2-206ENST00000557566 CHMP7Q8WUX9 453 aaPredicted RBP12.96□□□□□ -0.33
SPTLC2-206ENST00000557566 WDR97A6NE52 1622 aa12.95□□□□□ -0.34
SPTLC2-206ENST00000557566 CCDC88BA6NC98 1476 aa12.94□□□□□ -0.34
SPTLC2-206ENST00000557566 MAGI1Q96QZ7 1491 aaPredicted RBP12.94□□□□□ -0.34
SPTLC2-206ENST00000557566 MYCNP04198 464 aaPredicted RBP12.94□□□□□ -0.34
SPTLC2-206ENST00000557566 TDRD9Q8NDG6 1382 aaKnown RBP12.93□□□□□ -0.34
SPTLC2-206ENST00000557566 RAD54L2Q9Y4B4 1467 aa12.91□□□□□ -0.34
SPTLC2-206ENST00000557566 SOGA1O94964 1423 aa12.9□□□□□ -0.34
SPTLC2-206ENST00000557566 SYNJ2O15056 1496 aa12.9□□□□□ -0.34
SPTLC2-206ENST00000557566 KIF13AQ9H1H9 1805 aa12.87□□□□□ -0.35
SPTLC2-206ENST00000557566 GRIN2BQ13224 1484 aa12.86□□□□□ -0.35
SPTLC2-206ENST00000557566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.85□□□□□ -0.35
SPTLC2-206ENST00000557566 HNRNPUL2Q1KMD3 747 aaKnown RBP12.85□□□□□ -0.35
SPTLC2-206ENST00000557566 PBRM1Q86U86 1689 aa12.82□□□□□ -0.36
SPTLC2-206ENST00000557566 FGD5Q6ZNL6 1462 aa12.81□□□□□ -0.36
SPTLC2-206ENST00000557566 ERCC6L2Q5T890 1561 aa12.8□□□□□ -0.36
SPTLC2-206ENST00000557566 SAMD1Q6SPF0 538 aaPredicted RBP12.79□□□□□ -0.36
SPTLC2-206ENST00000557566 ABCB7O75027 752 aa12.78□□□□□ -0.36
SPTLC2-206ENST00000557566 KDM4FA0A1W2PPD8 638 aa12.77□□□□□ -0.37
SPTLC2-206ENST00000557566 CEP170Q5SW79 1584 aa12.75□□□□□ -0.37
SPTLC2-206ENST00000557566 APLP2Q06481 763 aa12.74□□□□□ -0.37
SPTLC2-206ENST00000557566 ZNF219Q9P2Y4 722 aaPredicted RBP12.72□□□□□ -0.37
SPTLC2-206ENST00000557566 KDM6BO15054 1643 aa12.71□□□□□ -0.37
SPTLC2-206ENST00000557566 CUX1P39880 1505 aa12.71□□□□□ -0.38
SPTLC2-206ENST00000557566 SHROOM2Q13796 1616 aa12.7□□□□□ -0.38
SPTLC2-206ENST00000557566 GRIN2AQ12879 1464 aa12.7□□□□□ -0.38
SPTLC2-206ENST00000557566 FAM69CQ0P6D2 419 aa12.69□□□□□ -0.38
SPTLC2-206ENST00000557566 ABCC10Q5T3U5 1492 aa12.69□□□□□ -0.38
SPTLC2-206ENST00000557566 ABCA5Q8WWZ7 1642 aa12.69□□□□□ -0.38
SPTLC2-206ENST00000557566 NUP160Q12769 1436 aa12.67□□□□□ -0.38
SPTLC2-206ENST00000557566 DIP2BQ9P265 1576 aa12.66□□□□□ -0.38
SPTLC2-206ENST00000557566 MAPKBP1O60336 1514 aa12.64□□□□□ -0.39
SPTLC2-206ENST00000557566 ABCA10Q8WWZ4 1543 aa12.64□□□□□ -0.39
SPTLC2-206ENST00000557566 ADAMTS12P58397 1594 aa12.64□□□□□ -0.39
SPTLC2-206ENST00000557566 ATXN8OSP0DMR3 200 aa12.63□□□□□ -0.39
SPTLC2-206ENST00000557566 TSPOAP1O95153 1857 aa12.63□□□□□ -0.39
SPTLC2-206ENST00000557566 NPM1P06748 294 aaKnown RBP eCLIP12.62□□□□□ -0.39
SPTLC2-206ENST00000557566 HECW2Q9P2P5 1572 aa12.6□□□□□ -0.39
SPTLC2-206ENST00000557566 PRG4Q92954 1404 aaPredicted RBP12.59□□□□□ -0.39
SPTLC2-206ENST00000557566 ADGRL1O94910 1474 aa12.58□□□□□ -0.4
SPTLC2-206ENST00000557566 FHAD1B1AJZ9 1412 aa12.56□□□□□ -0.4
SPTLC2-206ENST00000557566 ATF5Q9Y2D1 282 aaPredicted RBP12.55□□□□□ -0.4
SPTLC2-206ENST00000557566 ADCY10Q96PN6 1610 aa12.55□□□□□ -0.4
SPTLC2-206ENST00000557566 RBM42Q9BTD8 480 aaKnown RBP12.54□□□□□ -0.4
SPTLC2-206ENST00000557566 JPH4Q96JJ6 628 aa12.52□□□□□ -0.41
SPTLC2-206ENST00000557566 FBXO41Q8TF61 875 aa12.51□□□□□ -0.41
SPTLC2-206ENST00000557566 ERICH3Q5RHP9 1530 aa12.49□□□□□ -0.41
SPTLC2-206ENST00000557566 WRNQ14191 1432 aaPredicted RBP eCLIP12.48□□□□□ -0.41
SPTLC2-206ENST00000557566 RUSC2Q8N2Y8 1516 aa12.47□□□□□ -0.41
SPTLC2-206ENST00000557566 CHRDL2Q6WN34 429 aa12.47□□□□□ -0.41
SPTLC2-206ENST00000557566 PPRC1Q5VV67 1664 aaKnown RBP12.44□□□□□ -0.42
SPTLC2-206ENST00000557566 GLI2P10070 1586 aa12.4□□□□□ -0.42
SPTLC2-206ENST00000557566 TOP2BQ02880 1626 aa12.39□□□□□ -0.43
SPTLC2-206ENST00000557566 BIVM-ERCC5R4GMW8 1640 aa12.39□□□□□ -0.43
SPTLC2-206ENST00000557566 PLB1Q6P1J6 1458 aa12.37□□□□□ -0.43
SPTLC2-206ENST00000557566 LMTK3Q96Q04 1460 aa12.37□□□□□ -0.43
SPTLC2-206ENST00000557566 COL17A1Q9UMD9 1497 aaPredicted RBP12.35□□□□□ -0.43
SPTLC2-206ENST00000557566 ABCC2Q92887 1545 aa12.35□□□□□ -0.43
SPTLC2-206ENST00000557566 ASXL2Q76L83 1435 aa12.35□□□□□ -0.43
SPTLC2-206ENST00000557566 POLA2Q14181 598 aa12.34□□□□□ -0.43
SPTLC2-206ENST00000557566 TEX14Q8IWB6 1497 aa12.34□□□□□ -0.43
SPTLC2-206ENST00000557566 KIAA0586Q9BVV6 1533 aa12.33□□□□□ -0.44
SPTLC2-206ENST00000557566 MAP3K4Q9Y6R4 1608 aa12.33□□□□□ -0.44
SPTLC2-206ENST00000557566 CUL7Q14999 1698 aa12.32□□□□□ -0.44
SPTLC2-206ENST00000557566 PTPRGP23470 1445 aa12.32□□□□□ -0.44
SPTLC2-206ENST00000557566 EPRSP07814 1512 aaKnown RBP12.27□□□□□ -0.44
SPTLC2-206ENST00000557566 TTBK1Q5TCY1 1321 aaPredicted RBP12.27□□□□□ -0.45
SPTLC2-206ENST00000557566 SP7Q8TDD2 431 aaPredicted RBP12.26□□□□□ -0.45
SPTLC2-206ENST00000557566 TNIKQ9UKE5 1360 aa12.26□□□□□ -0.45
SPTLC2-206ENST00000557566 UHRF1BP1LA0JNW5 1464 aa12.26□□□□□ -0.45
SPTLC2-206ENST00000557566 CARMIL2Q6F5E8 1435 aa12.25□□□□□ -0.45
SPTLC2-206ENST00000557566 SOCS7O14512 581 aa12.24□□□□□ -0.45
SPTLC2-206ENST00000557566 KIF21BO75037 1637 aa12.22□□□□□ -0.45
SPTLC2-206ENST00000557566 UACAQ9BZF9 1416 aa12.21□□□□□ -0.45
SPTLC2-206ENST00000557566 KDM5BQ9UGL1 1544 aa12.21□□□□□ -0.46
SPTLC2-206ENST00000557566 ZCCHC11Q5TAX3 1644 aaKnown RBP12.2□□□□□ -0.46
SPTLC2-206ENST00000557566 PTPRMP28827 1452 aa12.18□□□□□ -0.46
SPTLC2-206ENST00000557566 PCF11O94913 1555 aaKnown RBP12.18□□□□□ -0.46
SPTLC2-206ENST00000557566 DISP3Q9P2K9 1392 aa12.18□□□□□ -0.46
SPTLC2-206ENST00000557566 ILDR2Q71H61 639 aa12.17□□□□□ -0.46
SPTLC2-206ENST00000557566 CFAP43Q8NDM7 1665 aa12.16□□□□□ -0.46
SPTLC2-206ENST00000557566 ADAMTSL3P82987 1691 aa12.16□□□□□ -0.46
SPTLC2-206ENST00000557566 WDR7Q9Y4E6 1490 aa12.15□□□□□ -0.46
SPTLC2-206ENST00000557566 IQGAP2Q13576 1575 aa12.15□□□□□ -0.46
SPTLC2-206ENST00000557566 MAGI3Q5TCQ9 1506 aa12.15□□□□□ -0.46
SPTLC2-206ENST00000557566 IGF1RP08069 1367 aa12.15□□□□□ -0.46
SPTLC2-206ENST00000557566 AKT1S1Q96B36 256 aa12.14□□□□□ -0.47
SPTLC2-206ENST00000557566 ZBTB12Q9Y330 459 aaPredicted RBP12.14□□□□□ -0.47
SPTLC2-206ENST00000557566 CD109Q6YHK3 1445 aa12.13□□□□□ -0.47
SPTLC2-206ENST00000557566 KIF27Q86VH2 1401 aa12.11□□□□□ -0.47
SPTLC2-206ENST00000557566 DISP1Q96F81 1524 aa12.11□□□□□ -0.47
SPTLC2-206ENST00000557566 CERKQ8TCT0 537 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms