RNA–Protein interactions for RNA: ENST00000557440.1

LINC00639-205, long intergenic non-protein coding RNA 639, humanhuman

TSL 2

Gene LINC00639, Length 3,644 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-205ENST00000557440 SENP3-EIF4A1A0A087X0R7 540 aa19.52■□□□□ 0.72
LINC00639-205ENST00000557440 NEFLP07196 543 aa19.52■□□□□ 0.71
LINC00639-205ENST00000557440 CUX1P39880 1505 aa19.51■□□□□ 0.71
LINC00639-205ENST00000557440 ZNF777Q9ULD5 760 aaPredicted RBP19.5■□□□□ 0.71
LINC00639-205ENST00000557440 RAD54L2Q9Y4B4 1467 aa19.48■□□□□ 0.71
LINC00639-205ENST00000557440 ANP32CO43423 234 aa19.48■□□□□ 0.71
LINC00639-205ENST00000557440 NCAPD3P42695 1498 aa19.47■□□□□ 0.71
LINC00639-205ENST00000557440 FKBP8Q14318 412 aa19.46■□□□□ 0.71
LINC00639-205ENST00000557440 PRXQ9BXM0 1461 aa19.46■□□□□ 0.7
LINC00639-205ENST00000557440 TONSLQ96HA7 1378 aa19.45■□□□□ 0.7
LINC00639-205ENST00000557440 FOXD1Q16676 465 aa19.44■□□□□ 0.7
LINC00639-205ENST00000557440 ARHGAP35Q9NRY4 1499 aa19.43■□□□□ 0.7
LINC00639-205ENST00000557440 TOP2BQ02880 1626 aa19.43■□□□□ 0.7
LINC00639-205ENST00000557440 FGD5Q6ZNL6 1462 aa19.42■□□□□ 0.7
LINC00639-205ENST00000557440 IRX6P78412 446 aaPredicted RBP19.41■□□□□ 0.7
LINC00639-205ENST00000557440 PHLDB1Q86UU1 1377 aa19.4■□□□□ 0.7
LINC00639-205ENST00000557440 NESP48681 1621 aa19.4■□□□□ 0.7
LINC00639-205ENST00000557440 CFTRP13569 1480 aa19.38■□□□□ 0.69
LINC00639-205ENST00000557440 PEG3Q9GZU2 1588 aa19.37■□□□□ 0.69
LINC00639-205ENST00000557440 SETD5Q9C0A6 1442 aa19.36■□□□□ 0.69
LINC00639-205ENST00000557440 SUPT16HQ9Y5B9 1047 aaKnown RBP19.34■□□□□ 0.69
LINC00639-205ENST00000557440 CLSPNQ9HAW4 1339 aa19.34■□□□□ 0.69
LINC00639-205ENST00000557440 FANCD2Q9BXW9 1451 aa19.34■□□□□ 0.69
LINC00639-205ENST00000557440 HNRNPUQ00839 825 aaKnown RBP eCLIP19.31■□□□□ 0.68
LINC00639-205ENST00000557440 FAM9BQ8IZU0 186 aa19.28■□□□□ 0.68
LINC00639-205ENST00000557440 FHAD1B1AJZ9 1412 aa19.27■□□□□ 0.68
LINC00639-205ENST00000557440 ERICH3Q5RHP9 1530 aa19.22■□□□□ 0.67
LINC00639-205ENST00000557440 PPP1R15AO75807 674 aaPredicted RBP19.21■□□□□ 0.67
LINC00639-205ENST00000557440 RRBP1Q9P2E9 1410 aaKnown RBP19.2■□□□□ 0.66
LINC00639-205ENST00000557440 MYT1Q01538 1121 aa19.18■□□□□ 0.66
LINC00639-205ENST00000557440 SLC4A1APQ9BWU0 796 aaKnown RBP19.18■□□□□ 0.66
LINC00639-205ENST00000557440 LRRC9Q6ZRR7 1453 aa19.17■□□□□ 0.66
LINC00639-205ENST00000557440 KDM2AQ9Y2K7 1162 aa19.17■□□□□ 0.66
LINC00639-205ENST00000557440 CHMP7Q8WUX9 453 aaPredicted RBP19.16■□□□□ 0.66
LINC00639-205ENST00000557440 HMGXB3Q12766 1538 aa19.16■□□□□ 0.66
LINC00639-205ENST00000557440 SALL2Q9Y467 1007 aaPredicted RBP19.13■□□□□ 0.65
LINC00639-205ENST00000557440 CC2D2AQ9P2K1 1620 aa19.12■□□□□ 0.65
LINC00639-205ENST00000557440 MYT1LQ9UL68 1186 aa19.12■□□□□ 0.65
LINC00639-205ENST00000557440 ZNF644Q9H582 1327 aaPredicted RBP19.1■□□□□ 0.65
LINC00639-205ENST00000557440 POLA1P09884 1462 aaPredicted RBP19.09■□□□□ 0.65
LINC00639-205ENST00000557440 HSPA5P11021 654 aaKnown RBP19.09■□□□□ 0.65
LINC00639-205ENST00000557440 EIF4G2P78344 907 aaKnown RBP eCLIP19.08■□□□□ 0.65
LINC00639-205ENST00000557440 BIVM-ERCC5R4GMW8 1640 aa19.08■□□□□ 0.64
LINC00639-205ENST00000557440 MRS2Q9HD23 443 aa19.07■□□□□ 0.64
LINC00639-205ENST00000557440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.06■□□□□ 0.64
LINC00639-205ENST00000557440 CDK11AQ9UQ88 783 aaPredicted RBP19.06■□□□□ 0.64
LINC00639-205ENST00000557440 AQRO60306 1485 aaKnown RBP eCLIP19.06■□□□□ 0.64
LINC00639-205ENST00000557440 CFDP1Q9UEE9 299 aaPredicted RBP19.05■□□□□ 0.64
LINC00639-205ENST00000557440 FMN1Q68DA7 1419 aa19.05■□□□□ 0.64
LINC00639-205ENST00000557440 L3MBTL2Q969R5 705 aa19.04■□□□□ 0.64
LINC00639-205ENST00000557440 ERICH6Q7L0X2 663 aa19.03■□□□□ 0.64
LINC00639-205ENST00000557440 MPHOSPH9Q99550 1183 aa19.03■□□□□ 0.64
LINC00639-205ENST00000557440 TOPBP1Q92547 1522 aa19.02■□□□□ 0.64
LINC00639-205ENST00000557440 WDR97A6NE52 1622 aa19.02■□□□□ 0.64
LINC00639-205ENST00000557440 TIAM1Q13009 1591 aa19.02■□□□□ 0.63
LINC00639-205ENST00000557440 PDS5BQ9NTI5 1447 aa19■□□□□ 0.63
LINC00639-205ENST00000557440 RGL3Q3MIN7 710 aa19■□□□□ 0.63
LINC00639-205ENST00000557440 GAPVD1Q14C86 1478 aa19■□□□□ 0.63
LINC00639-205ENST00000557440 FGD6Q6ZV73 1430 aa19■□□□□ 0.63
LINC00639-205ENST00000557440 CCDC18Q5T9S5 1454 aa18.97■□□□□ 0.63
LINC00639-205ENST00000557440 TSHZ2Q9NRE2 1034 aa18.97■□□□□ 0.63
LINC00639-205ENST00000557440 PCF11O94913 1555 aaKnown RBP18.96■□□□□ 0.63
LINC00639-205ENST00000557440 CASKIN1Q8WXD9 1431 aa18.92■□□□□ 0.62
LINC00639-205ENST00000557440 CCDC184Q52MB2 194 aa18.9■□□□□ 0.62
LINC00639-205ENST00000557440 NCOA2Q15596 1464 aa18.9■□□□□ 0.62
LINC00639-205ENST00000557440 MAPKBP1O60336 1514 aa18.89■□□□□ 0.62
LINC00639-205ENST00000557440 SENP3Q9H4L4 574 aaPredicted RBP18.89■□□□□ 0.61
LINC00639-205ENST00000557440 TIMELESSQ9UNS1 1208 aa18.89■□□□□ 0.61
LINC00639-205ENST00000557440 PTPRKQ15262 1439 aa18.89■□□□□ 0.61
LINC00639-205ENST00000557440 TSPY4P0CV99 314 aa18.88■□□□□ 0.61
LINC00639-205ENST00000557440 TSPY10P0CW01 314 aa18.88■□□□□ 0.61
LINC00639-205ENST00000557440 PLEKHD1A6NEE1 506 aa18.88■□□□□ 0.61
LINC00639-205ENST00000557440 PKD2Q13563 968 aa18.88■□□□□ 0.61
LINC00639-205ENST00000557440 B4GALNT3Q6L9W6 998 aa18.85■□□□□ 0.61
LINC00639-205ENST00000557440 URB2Q14146 1524 aaKnown RBP18.84■□□□□ 0.61
LINC00639-205ENST00000557440 MYOM3Q5VTT5 1437 aa18.84■□□□□ 0.61
LINC00639-205ENST00000557440 WASHC2AQ641Q2 1341 aa18.84■□□□□ 0.61
LINC00639-205ENST00000557440 ERCC6Q03468 1493 aa18.83■□□□□ 0.61
LINC00639-205ENST00000557440 ABCA10Q8WWZ4 1543 aa18.82■□□□□ 0.6
LINC00639-205ENST00000557440 CCER2I3L3R5 266 aa18.82■□□□□ 0.6
LINC00639-205ENST00000557440 TMC1Q8TDI8 760 aa18.81■□□□□ 0.6
LINC00639-205ENST00000557440 FYCO1Q9BQS8 1478 aa18.81■□□□□ 0.6
LINC00639-205ENST00000557440 HNRNPMP52272 730 aaKnown RBP eCLIP18.81■□□□□ 0.6
LINC00639-205ENST00000557440 C11orf95C9JLR9 678 aaPredicted RBP18.8■□□□□ 0.6
LINC00639-205ENST00000557440 DNMBPQ6XZF7 1577 aa18.8■□□□□ 0.6
LINC00639-205ENST00000557440 DCAF11Q8TEB1 546 aa18.8■□□□□ 0.6
LINC00639-205ENST00000557440 CARD11Q9BXL7 1154 aa18.8■□□□□ 0.6
LINC00639-205ENST00000557440 NBPF8Q3BBV2 869 aa18.8■□□□□ 0.6
LINC00639-205ENST00000557440 UACAQ9BZF9 1416 aa18.78■□□□□ 0.6
LINC00639-205ENST00000557440 CDK13Q14004 1512 aaKnown RBP18.78■□□□□ 0.6
LINC00639-205ENST00000557440 NAIPQ13075 1403 aa18.78■□□□□ 0.6
LINC00639-205ENST00000557440 JPH4Q96JJ6 628 aa18.78■□□□□ 0.6
LINC00639-205ENST00000557440 RBM19Q9Y4C8 960 aaKnown RBP18.76■□□□□ 0.59
LINC00639-205ENST00000557440 HFM1A2PYH4 1435 aa18.71■□□□□ 0.59
LINC00639-205ENST00000557440 NUP155O75694 1391 aa18.7■□□□□ 0.58
LINC00639-205ENST00000557440 PRKRIP1Q9H875 184 aaPredicted RBP18.7■□□□□ 0.58
LINC00639-205ENST00000557440 ZNF608Q9ULD9 1512 aaPredicted RBP18.68■□□□□ 0.58
LINC00639-205ENST00000557440 PRG4Q92954 1404 aaPredicted RBP18.67■□□□□ 0.58
LINC00639-205ENST00000557440 NPM2Q86SE8 214 aaKnown RBP18.67■□□□□ 0.58
LINC00639-205ENST00000557440 CC2D1BQ5T0F9 858 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms