RNA–Protein interactions for RNA: ENST00000557370.2

MTHFD1-215, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-215ENST00000557370 ADGRL1O94910 1474 aa11.55□□□□□ -0.56
MTHFD1-215ENST00000557370 GRIN2BQ13224 1484 aa11.54□□□□□ -0.56
MTHFD1-215ENST00000557370 SOCS7O14512 581 aa11.53□□□□□ -0.56
MTHFD1-215ENST00000557370 ZEB1P37275 1124 aaPredicted RBP11.53□□□□□ -0.56
MTHFD1-215ENST00000557370 CACNB1Q02641 598 aaPredicted RBP11.53□□□□□ -0.56
MTHFD1-215ENST00000557370 WDR97A6NE52 1622 aa11.53□□□□□ -0.56
MTHFD1-215ENST00000557370 NPM1P06748 294 aaKnown RBP eCLIP11.51□□□□□ -0.57
MTHFD1-215ENST00000557370 ABCC10Q5T3U5 1492 aa11.51□□□□□ -0.57
MTHFD1-215ENST00000557370 LOC105371045A0A1W2PR82 267 aa11.48□□□□□ -0.57
MTHFD1-215ENST00000557370 TSPOAP1O95153 1857 aa11.48□□□□□ -0.57
MTHFD1-215ENST00000557370 CEP170Q5SW79 1584 aa11.46□□□□□ -0.57
MTHFD1-215ENST00000557370 DIP2BQ9P265 1576 aa11.46□□□□□ -0.57
MTHFD1-215ENST00000557370 DISP3Q9P2K9 1392 aa11.46□□□□□ -0.57
MTHFD1-215ENST00000557370 PBRM1Q86U86 1689 aa11.44□□□□□ -0.58
MTHFD1-215ENST00000557370 CCDC88BA6NC98 1476 aa11.43□□□□□ -0.58
MTHFD1-215ENST00000557370 FGD5Q6ZNL6 1462 aa11.43□□□□□ -0.58
MTHFD1-215ENST00000557370 ILDR2Q71H61 639 aa11.42□□□□□ -0.58
MTHFD1-215ENST00000557370 MAPKBP1O60336 1514 aa11.4□□□□□ -0.58
MTHFD1-215ENST00000557370 GRIN2AQ12879 1464 aa11.38□□□□□ -0.59
MTHFD1-215ENST00000557370 EEA1Q15075 1411 aa11.37□□□□□ -0.59
MTHFD1-215ENST00000557370 DMRT2Q9Y5R5 561 aa11.35□□□□□ -0.59
MTHFD1-215ENST00000557370 SHROOM2Q13796 1616 aa11.35□□□□□ -0.59
MTHFD1-215ENST00000557370 PRG4Q92954 1404 aaPredicted RBP11.35□□□□□ -0.59
MTHFD1-215ENST00000557370 NUP160Q12769 1436 aa11.33□□□□□ -0.6
MTHFD1-215ENST00000557370 TOP2BQ02880 1626 aa11.31□□□□□ -0.6
MTHFD1-215ENST00000557370 ADCY10Q96PN6 1610 aa11.27□□□□□ -0.6
MTHFD1-215ENST00000557370 ADAMTS12P58397 1594 aa11.27□□□□□ -0.61
MTHFD1-215ENST00000557370 ABCA5Q8WWZ7 1642 aa11.27□□□□□ -0.61
MTHFD1-215ENST00000557370 CUX1P39880 1505 aa11.26□□□□□ -0.61
MTHFD1-215ENST00000557370 SPATA31D1Q6ZQQ2 1576 aa11.25□□□□□ -0.61
MTHFD1-215ENST00000557370 JPH4Q96JJ6 628 aa11.25□□□□□ -0.61
MTHFD1-215ENST00000557370 WRNQ14191 1432 aaPredicted RBP eCLIP11.25□□□□□ -0.61
MTHFD1-215ENST00000557370 MAPK8IP2Q13387 824 aaPredicted RBP11.24□□□□□ -0.61
MTHFD1-215ENST00000557370 ABCA10Q8WWZ4 1543 aa11.22□□□□□ -0.61
MTHFD1-215ENST00000557370 FHAD1B1AJZ9 1412 aa11.21□□□□□ -0.61
MTHFD1-215ENST00000557370 FAM9AQ8IZU1 332 aaPredicted RBP11.21□□□□□ -0.61
MTHFD1-215ENST00000557370 TNIKQ9UKE5 1360 aa11.2□□□□□ -0.62
MTHFD1-215ENST00000557370 PPRC1Q5VV67 1664 aaKnown RBP11.19□□□□□ -0.62
MTHFD1-215ENST00000557370 CERKQ8TCT0 537 aa11.18□□□□□ -0.62
MTHFD1-215ENST00000557370 TEX14Q8IWB6 1497 aa11.18□□□□□ -0.62
MTHFD1-215ENST00000557370 COL17A1Q9UMD9 1497 aaPredicted RBP11.18□□□□□ -0.62
MTHFD1-215ENST00000557370 TTBK1Q5TCY1 1321 aaPredicted RBP11.17□□□□□ -0.62
MTHFD1-215ENST00000557370 PLB1Q6P1J6 1458 aa11.15□□□□□ -0.62
MTHFD1-215ENST00000557370 ASXL2Q76L83 1435 aa11.15□□□□□ -0.62
MTHFD1-215ENST00000557370 GLI2P10070 1586 aa11.15□□□□□ -0.62
MTHFD1-215ENST00000557370 GOLGA3Q08378 1498 aa11.13□□□□□ -0.63
MTHFD1-215ENST00000557370 PCF11O94913 1555 aaKnown RBP11.13□□□□□ -0.63
MTHFD1-215ENST00000557370 RUSC2Q8N2Y8 1516 aa11.13□□□□□ -0.63
MTHFD1-215ENST00000557370 PPARGC1BQ86YN6 1023 aaKnown RBP11.12□□□□□ -0.63
MTHFD1-215ENST00000557370 CSRNP3Q8WYN3 585 aa11.12□□□□□ -0.63
MTHFD1-215ENST00000557370 SCAF1Q9H7N4 1312 aaKnown RBP11.11□□□□□ -0.63
MTHFD1-215ENST00000557370 KIF21BO75037 1637 aa11.11□□□□□ -0.63
MTHFD1-215ENST00000557370 CEP162Q5TB80 1403 aa11.1□□□□□ -0.63
MTHFD1-215ENST00000557370 PTPRMP28827 1452 aa11.1□□□□□ -0.63
MTHFD1-215ENST00000557370 ABCC2Q92887 1545 aa11.09□□□□□ -0.63
MTHFD1-215ENST00000557370 ERICH3Q5RHP9 1530 aa11.08□□□□□ -0.64
MTHFD1-215ENST00000557370 PTPRGP23470 1445 aa11.08□□□□□ -0.64
MTHFD1-215ENST00000557370 MAP3K4Q9Y6R4 1608 aa11.07□□□□□ -0.64
MTHFD1-215ENST00000557370 CUL7Q14999 1698 aa11.06□□□□□ -0.64
MTHFD1-215ENST00000557370 HSPA2P54652 639 aa11.06□□□□□ -0.64
MTHFD1-215ENST00000557370 EPRSP07814 1512 aaKnown RBP11.04□□□□□ -0.64
MTHFD1-215ENST00000557370 KIAA0586Q9BVV6 1533 aa11.03□□□□□ -0.64
MTHFD1-215ENST00000557370 ARID4BQ4LE39 1312 aaPredicted RBP11.01□□□□□ -0.65
MTHFD1-215ENST00000557370 ADAMTSL3P82987 1691 aa10.99□□□□□ -0.65
MTHFD1-215ENST00000557370 UBTFP17480 764 aaKnown RBP10.99□□□□□ -0.65
MTHFD1-215ENST00000557370 BIVM-ERCC5R4GMW8 1640 aa10.98□□□□□ -0.65
MTHFD1-215ENST00000557370 CCER1Q8TC90 406 aaPredicted RBP10.98□□□□□ -0.65
MTHFD1-215ENST00000557370 CARMIL2Q6F5E8 1435 aa10.98□□□□□ -0.65
MTHFD1-215ENST00000557370 DCAF8L1A6NGE4 600 aa10.97□□□□□ -0.65
MTHFD1-215ENST00000557370 MADDQ8WXG6 1647 aa10.97□□□□□ -0.65
MTHFD1-215ENST00000557370 RNF39Q9H2S5 420 aa10.96□□□□□ -0.65
MTHFD1-215ENST00000557370 UHRF1BP1LA0JNW5 1464 aa10.94□□□□□ -0.66
MTHFD1-215ENST00000557370 CD109Q6YHK3 1445 aa10.94□□□□□ -0.66
MTHFD1-215ENST00000557370 UACAQ9BZF9 1416 aa10.94□□□□□ -0.66
MTHFD1-215ENST00000557370 VPS8Q8N3P4 1428 aa10.93□□□□□ -0.66
MTHFD1-215ENST00000557370 RIMS1Q86UR5 1692 aaKnown RBP10.93□□□□□ -0.66
MTHFD1-215ENST00000557370 CLIP1P30622 1438 aa10.92□□□□□ -0.66
MTHFD1-215ENST00000557370 ZCCHC11Q5TAX3 1644 aaKnown RBP10.92□□□□□ -0.66
MTHFD1-215ENST00000557370 APLP2Q06481 763 aa10.92□□□□□ -0.66
MTHFD1-215ENST00000557370 PELP1Q8IZL8 1130 aaKnown RBP10.92□□□□□ -0.66
MTHFD1-215ENST00000557370 EHMT2Q96KQ7 1210 aa10.92□□□□□ -0.66
MTHFD1-215ENST00000557370 WDR7Q9Y4E6 1490 aa10.92□□□□□ -0.66
MTHFD1-215ENST00000557370 BCORL1Q5H9F3 1711 aa10.92□□□□□ -0.66
MTHFD1-215ENST00000557370 MAGI3Q5TCQ9 1506 aa10.91□□□□□ -0.66
MTHFD1-215ENST00000557370 KDM5BQ9UGL1 1544 aa10.9□□□□□ -0.66
MTHFD1-215ENST00000557370 CFAP43Q8NDM7 1665 aa10.9□□□□□ -0.66
MTHFD1-215ENST00000557370 KCNH8Q96L42 1107 aa10.9□□□□□ -0.66
MTHFD1-215ENST00000557370 CLSPNQ9HAW4 1339 aa10.87□□□□□ -0.67
MTHFD1-215ENST00000557370 PRXQ9BXM0 1461 aa10.85□□□□□ -0.67
MTHFD1-215ENST00000557370 KIF27Q86VH2 1401 aa10.84□□□□□ -0.67
MTHFD1-215ENST00000557370 ARAP3Q8WWN8 1544 aa10.84□□□□□ -0.67
MTHFD1-215ENST00000557370 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.84□□□□□ -0.67
MTHFD1-215ENST00000557370 YEATS2Q9ULM3 1422 aa10.84□□□□□ -0.67
MTHFD1-215ENST00000557370 CENPBP07199 599 aaPredicted RBP10.82□□□□□ -0.68
MTHFD1-215ENST00000557370 RAPGEF2Q9Y4G8 1499 aa10.81□□□□□ -0.68
MTHFD1-215ENST00000557370 RAPGEF3O95398 923 aa10.81□□□□□ -0.68
MTHFD1-215ENST00000557370 POGZQ7Z3K3 1410 aa10.81□□□□□ -0.68
MTHFD1-215ENST00000557370 IQGAP2Q13576 1575 aa10.81□□□□□ -0.68
MTHFD1-215ENST00000557370 C1QBPQ07021 282 aaKnown RBP10.8□□□□□ -0.68
MTHFD1-215ENST00000557370 UBAP1LF5GYI3 381 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms