RNA–Protein interactions for RNA: ENST00000557295.1

LINC00640-204, long intergenic non-protein coding RNA 640, humanhuman

TSL 5 BASIC

Gene LINC00640, Length 708 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-204ENST00000557295 PROM2Q8N271 834 aa13.42□□□□□ -0.26
LINC00640-204ENST00000557295 BAZ1AQ9NRL2 1556 aaPredicted RBP13.41□□□□□ -0.26
LINC00640-204ENST00000557295 CADPSQ9ULU8 1353 aa13.37□□□□□ -0.27
LINC00640-204ENST00000557295 VASPP50552 380 aaPredicted RBP13.37□□□□□ -0.27
LINC00640-204ENST00000557295 MRC2Q9UBG0 1479 aa13.36□□□□□ -0.27
LINC00640-204ENST00000557295 WDR62O43379 1518 aa13.34□□□□□ -0.27
LINC00640-204ENST00000557295 PIP4P2Q8N4L2 257 aa13.33□□□□□ -0.28
LINC00640-204ENST00000557295 KIF21AQ7Z4S6 1674 aa13.32□□□□□ -0.28
LINC00640-204ENST00000557295 SPDYE1Q8NFV5 336 aaPredicted RBP13.3□□□□□ -0.28
LINC00640-204ENST00000557295 FXR2P51116 673 aaKnown RBP eCLIP13.29□□□□□ -0.28
LINC00640-204ENST00000557295 MROH2BQ7Z745 1585 aa13.28□□□□□ -0.28
LINC00640-204ENST00000557295 CLEC11AQ9Y240 323 aa13.27□□□□□ -0.29
LINC00640-204ENST00000557295 STAG3Q9UJ98 1225 aa13.23□□□□□ -0.29
LINC00640-204ENST00000557295 KLHL34Q8N239 644 aa13.22□□□□□ -0.29
LINC00640-204ENST00000557295 CEP164Q9UPV0 1460 aa13.22□□□□□ -0.29
LINC00640-204ENST00000557295 FANCD2Q9BXW9 1451 aa13.18□□□□□ -0.3
LINC00640-204ENST00000557295 PLCD3Q8N3E9 789 aa13.18□□□□□ -0.3
LINC00640-204ENST00000557295 IFNLR1Q8IU57 520 aaPredicted RBP13.17□□□□□ -0.3
LINC00640-204ENST00000557295 CFTRP13569 1480 aa13.13□□□□□ -0.31
LINC00640-204ENST00000557295 SLC24A1O60721 1099 aa13.13□□□□□ -0.31
LINC00640-204ENST00000557295 PLEKHG5O94827 1062 aa13.13□□□□□ -0.31
LINC00640-204ENST00000557295 MIER1Q8N108 512 aa13.13□□□□□ -0.31
LINC00640-204ENST00000557295 PRKAR2AP13861 404 aaKnown RBP13.1□□□□□ -0.31
LINC00640-204ENST00000557295 RIMBP3CA6NJZ7 1639 aa13.09□□□□□ -0.31
LINC00640-204ENST00000557295 RIMBP3BA6NNM3 1639 aa13.09□□□□□ -0.31
LINC00640-204ENST00000557295 RIMBP3Q9UFD9 1639 aa13.09□□□□□ -0.31
LINC00640-204ENST00000557295 URB2Q14146 1524 aaKnown RBP13.08□□□□□ -0.31
LINC00640-204ENST00000557295 PRR29P0C7W0 189 aa13.08□□□□□ -0.32
LINC00640-204ENST00000557295 ARHGEF11O15085 1522 aa13.08□□□□□ -0.32
LINC00640-204ENST00000557295 SPOCK2Q92563 424 aa13.05□□□□□ -0.32
LINC00640-204ENST00000557295 HAX1O00165 279 aa13.04□□□□□ -0.32
LINC00640-204ENST00000557295 CYB5RLQ6IPT4 315 aa13.03□□□□□ -0.32
LINC00640-204ENST00000557295 WIZO95785 1651 aa13□□□□□ -0.33
LINC00640-204ENST00000557295 IFT140Q96RY7 1462 aa13□□□□□ -0.33
LINC00640-204ENST00000557295 ZNF608Q9ULD9 1512 aaPredicted RBP12.99□□□□□ -0.33
LINC00640-204ENST00000557295 CHADLQ6NUI6 762 aa12.99□□□□□ -0.33
LINC00640-204ENST00000557295 ZBTB47Q9UFB7 747 aaPredicted RBP12.99□□□□□ -0.33
LINC00640-204ENST00000557295 SP7Q8TDD2 431 aaPredicted RBP12.98□□□□□ -0.33
LINC00640-204ENST00000557295 ARAP1Q96P48 1450 aa12.92□□□□□ -0.34
LINC00640-204ENST00000557295 RSF1Q96T23 1441 aaPredicted RBP12.91□□□□□ -0.34
LINC00640-204ENST00000557295 TOP2AP11388 1531 aaKnown RBP12.9□□□□□ -0.34
LINC00640-204ENST00000557295 EVX2Q03828 476 aa12.88□□□□□ -0.35
LINC00640-204ENST00000557295 ECM2O94769 699 aaPredicted RBP12.87□□□□□ -0.35
LINC00640-204ENST00000557295 TOPBP1Q92547 1522 aa12.87□□□□□ -0.35
LINC00640-204ENST00000557295 C19orf67A6NJJ6 358 aa12.86□□□□□ -0.35
LINC00640-204ENST00000557295 PKD2Q13563 968 aa12.86□□□□□ -0.35
LINC00640-204ENST00000557295 CIZ1Q9ULV3 898 aaPredicted RBP12.85□□□□□ -0.35
LINC00640-204ENST00000557295 ABCC8Q09428 1581 aa12.85□□□□□ -0.35
LINC00640-204ENST00000557295 EIF4G3O43432 1585 aaKnown RBP12.83□□□□□ -0.36
LINC00640-204ENST00000557295 FARP1Q9Y4F1 1045 aaPredicted RBP12.83□□□□□ -0.36
LINC00640-204ENST00000557295 AQRO60306 1485 aaKnown RBP eCLIP12.83□□□□□ -0.36
LINC00640-204ENST00000557295 CREBZFQ9NS37 354 aa12.8□□□□□ -0.36
LINC00640-204ENST00000557295 CCDC88BA6NC98 1476 aa12.78□□□□□ -0.36
LINC00640-204ENST00000557295 DNMBPQ6XZF7 1577 aa12.76□□□□□ -0.37
LINC00640-204ENST00000557295 TARBP1Q13395 1621 aaKnown RBP12.75□□□□□ -0.37
LINC00640-204ENST00000557295 POLA1P09884 1462 aaPredicted RBP12.72□□□□□ -0.37
LINC00640-204ENST00000557295 CLASP1Q7Z460 1538 aa12.72□□□□□ -0.37
LINC00640-204ENST00000557295 CHD1O14646 1710 aa12.71□□□□□ -0.37
LINC00640-204ENST00000557295 TDRD9Q8NDG6 1382 aaKnown RBP12.71□□□□□ -0.37
LINC00640-204ENST00000557295 CD44P16070 742 aaKnown RBP12.7□□□□□ -0.38
LINC00640-204ENST00000557295 PRDM2Q13029 1718 aa12.7□□□□□ -0.38
LINC00640-204ENST00000557295 CHMP7Q8WUX9 453 aaPredicted RBP12.69□□□□□ -0.38
LINC00640-204ENST00000557295 GSE1Q14687 1217 aa12.68□□□□□ -0.38
LINC00640-204ENST00000557295 SOGA1O94964 1423 aa12.68□□□□□ -0.38
LINC00640-204ENST00000557295 SNAPC4Q5SXM2 1469 aa12.67□□□□□ -0.38
LINC00640-204ENST00000557295 RAD54L2Q9Y4B4 1467 aa12.67□□□□□ -0.38
LINC00640-204ENST00000557295 PLCB2Q00722 1185 aa12.67□□□□□ -0.38
LINC00640-204ENST00000557295 DCAF8Q5TAQ9 597 aa12.67□□□□□ -0.38
LINC00640-204ENST00000557295 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.67□□□□□ -0.38
LINC00640-204ENST00000557295 MAGI1Q96QZ7 1491 aaPredicted RBP12.65□□□□□ -0.38
LINC00640-204ENST00000557295 SYNJ1O43426 1573 aa12.64□□□□□ -0.39
LINC00640-204ENST00000557295 GAPVD1Q14C86 1478 aa12.63□□□□□ -0.39
LINC00640-204ENST00000557295 WDR97A6NE52 1622 aa12.62□□□□□ -0.39
LINC00640-204ENST00000557295 SYNJ2O15056 1496 aa12.62□□□□□ -0.39
LINC00640-204ENST00000557295 GABBR2O75899 941 aa12.62□□□□□ -0.39
LINC00640-204ENST00000557295 GRIN2BQ13224 1484 aa12.61□□□□□ -0.39
LINC00640-204ENST00000557295 RGL2O15211 777 aa12.61□□□□□ -0.39
LINC00640-204ENST00000557295 MNX1P50219 401 aaPredicted RBP12.61□□□□□ -0.39
LINC00640-204ENST00000557295 HAP1P54257 671 aaPredicted RBP12.61□□□□□ -0.39
LINC00640-204ENST00000557295 FAM212AQ96EL1 285 aa12.61□□□□□ -0.39
LINC00640-204ENST00000557295 NPM1P06748 294 aaKnown RBP eCLIP12.59□□□□□ -0.39
LINC00640-204ENST00000557295 BBXQ8WY36 941 aaPredicted RBP12.57□□□□□ -0.4
LINC00640-204ENST00000557295 FGD5Q6ZNL6 1462 aa12.57□□□□□ -0.4
LINC00640-204ENST00000557295 ZRANB1Q9UGI0 708 aa12.55□□□□□ -0.4
LINC00640-204ENST00000557295 CHGAP10645 457 aaKnown RBP12.54□□□□□ -0.4
LINC00640-204ENST00000557295 NUBP1P53384 320 aa12.54□□□□□ -0.4
LINC00640-204ENST00000557295 TAOK2Q9UL54 1235 aa12.54□□□□□ -0.4
LINC00640-204ENST00000557295 CLCN6P51797 869 aa12.51□□□□□ -0.41
LINC00640-204ENST00000557295 ZNF579Q8NAF0 562 aaKnown RBP12.51□□□□□ -0.41
LINC00640-204ENST00000557295 CFAP44Q96MT7 982 aa12.51□□□□□ -0.41
LINC00640-204ENST00000557295 PAK3O75914 559 aaPredicted RBP12.5□□□□□ -0.41
LINC00640-204ENST00000557295 PAXIP1Q6ZW49 1069 aaPredicted RBP12.5□□□□□ -0.41
LINC00640-204ENST00000557295 CUX1P39880 1505 aa12.49□□□□□ -0.41
LINC00640-204ENST00000557295 ERCC6L2Q5T890 1561 aa12.45□□□□□ -0.42
LINC00640-204ENST00000557295 NUP160Q12769 1436 aa12.45□□□□□ -0.42
LINC00640-204ENST00000557295 SPRYD3Q8NCJ5 442 aa12.44□□□□□ -0.42
LINC00640-204ENST00000557295 GRIN2AQ12879 1464 aa12.44□□□□□ -0.42
LINC00640-204ENST00000557295 ABCA10Q8WWZ4 1543 aa12.43□□□□□ -0.42
LINC00640-204ENST00000557295 RIOK3O14730 519 aaKnown RBP12.42□□□□□ -0.42
LINC00640-204ENST00000557295 ILDR1Q86SU0 546 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms