RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 TIAM1Q13009 1591 aa28.58■■■□□ 2.17
FOXN3-214ENST00000557258 DHX57Q6P158 1386 aaKnown RBP28.56■■■□□ 2.16
FOXN3-214ENST00000557258 FAM50AQ14320 339 aaKnown RBP28.55■■■□□ 2.16
FOXN3-214ENST00000557258 PCF11O94913 1555 aaKnown RBP28.55■■■□□ 2.16
FOXN3-214ENST00000557258 PHLDB1Q86UU1 1377 aa28.52■■■□□ 2.16
FOXN3-214ENST00000557258 GAPVD1Q14C86 1478 aa28.52■■■□□ 2.16
FOXN3-214ENST00000557258 LRRC9Q6ZRR7 1453 aa28.52■■■□□ 2.16
FOXN3-214ENST00000557258 FHAD1B1AJZ9 1412 aa28.49■■■□□ 2.15
FOXN3-214ENST00000557258 CUL7Q14999 1698 aa28.47■■■□□ 2.15
FOXN3-214ENST00000557258 WDR97A6NE52 1622 aa28.46■■■□□ 2.15
FOXN3-214ENST00000557258 ABCA5Q8WWZ7 1642 aa28.42■■■□□ 2.14
FOXN3-214ENST00000557258 SCAF1Q9H7N4 1312 aaKnown RBP28.42■■■□□ 2.14
FOXN3-214ENST00000557258 AQRO60306 1485 aaKnown RBP eCLIP28.4■■■□□ 2.144e-7■■■□□ 16.7
FOXN3-214ENST00000557258 CTTNBP2Q8WZ74 1663 aa28.39■■■□□ 2.13
FOXN3-214ENST00000557258 RAB3GAP2Q9H2M9 1393 aa28.37■■■□□ 2.13
FOXN3-214ENST00000557258 MAP3K1Q13233 1512 aa28.34■■■□□ 2.13
FOXN3-214ENST00000557258 YTHDC1Q96MU7 727 aaKnown RBP28.34■■■□□ 2.13
FOXN3-214ENST00000557258 ARID3CA6NKF2 412 aa28.33■■■□□ 2.13
FOXN3-214ENST00000557258 NEUROD1Q13562 356 aa28.33■■■□□ 2.13
FOXN3-214ENST00000557258 EFCAB5A4FU69 1503 aa28.32■■■□□ 2.12
FOXN3-214ENST00000557258 CASKIN1Q8WXD9 1431 aa28.31■■■□□ 2.12
FOXN3-214ENST00000557258 FYCO1Q9BQS8 1478 aa28.3■■■□□ 2.12
FOXN3-214ENST00000557258 TARBP1Q13395 1621 aaKnown RBP28.3■■■□□ 2.12
FOXN3-214ENST00000557258 MIER1Q8N108 512 aa28.3■■■□□ 2.12
FOXN3-214ENST00000557258 CFAP43Q8NDM7 1665 aa28.3■■■□□ 2.12
FOXN3-214ENST00000557258 FMN1Q68DA7 1419 aa28.25■■■□□ 2.11
FOXN3-214ENST00000557258 SNAPC4Q5SXM2 1469 aa28.23■■■□□ 2.11
FOXN3-214ENST00000557258 CLSPNQ9HAW4 1339 aa28.23■■■□□ 2.11
FOXN3-214ENST00000557258 MTUS2Q5JR59 1369 aa28.23■■■□□ 2.11
FOXN3-214ENST00000557258 ZNF608Q9ULD9 1512 aaPredicted RBP28.21■■■□□ 2.11
FOXN3-214ENST00000557258 ACIN1Q9UKV3 1341 aaKnown RBP28.2■■■□□ 2.11
FOXN3-214ENST00000557258 MRC2Q9UBG0 1479 aa28.2■■■□□ 2.11
FOXN3-214ENST00000557258 SETD5Q9C0A6 1442 aa28.19■■■□□ 2.1
FOXN3-214ENST00000557258 SIN3AQ96ST3 1273 aa28.16■■■□□ 2.1
FOXN3-214ENST00000557258 SAMD9Q5K651 1589 aa28.14■■■□□ 2.1
FOXN3-214ENST00000557258 PBRM1Q86U86 1689 aa28.12■■■□□ 2.09
FOXN3-214ENST00000557258 LRRIQ1Q96JM4 1722 aa28.11■■■□□ 2.09
FOXN3-214ENST00000557258 MAPKBP1O60336 1514 aa28.11■■■□□ 2.09
FOXN3-214ENST00000557258 FGD6Q6ZV73 1430 aa28.07■■■□□ 2.08
FOXN3-214ENST00000557258 GRIN2BQ13224 1484 aa28.06■■■□□ 2.08
FOXN3-214ENST00000557258 CENPBP07199 599 aaPredicted RBP28.06■■■□□ 2.08
FOXN3-214ENST00000557258 ADAMTS12P58397 1594 aa28.03■■■□□ 2.08
FOXN3-214ENST00000557258 ERCC6Q03468 1493 aa28.03■■■□□ 2.08
FOXN3-214ENST00000557258 NCOA2Q15596 1464 aa28.02■■■□□ 2.08
FOXN3-214ENST00000557258 FBLN2P98095 1184 aa28.01■■■□□ 2.07
FOXN3-214ENST00000557258 PTPRKQ15262 1439 aa28■■■□□ 2.07
FOXN3-214ENST00000557258 IQGAP2Q13576 1575 aa27.99■■■□□ 2.07
FOXN3-214ENST00000557258 GTF3C3Q9Y5Q9 886 aa27.98■■■□□ 2.07
FOXN3-214ENST00000557258 MAGI3Q5TCQ9 1506 aa27.98■■■□□ 2.07
FOXN3-214ENST00000557258 CHIC2Q9UKJ5 165 aa27.97■■■□□ 2.07
FOXN3-214ENST00000557258 IFT140Q96RY7 1462 aa27.95■■■□□ 2.06
FOXN3-214ENST00000557258 CDK13Q14004 1512 aaKnown RBP27.95■■■□□ 2.06
FOXN3-214ENST00000557258 WDR62O43379 1518 aa27.92■■■□□ 2.06
FOXN3-214ENST00000557258 MYOM3Q5VTT5 1437 aa27.91■■■□□ 2.06
FOXN3-214ENST00000557258 RRP7BPQ9NSQ0 103 aa27.9■■■□□ 2.06
FOXN3-214ENST00000557258 HIRIP3Q9BW71 556 aaPredicted RBP27.89■■■□□ 2.06
FOXN3-214ENST00000557258 EPRSP07814 1512 aaKnown RBP27.85■■■□□ 2.05
FOXN3-214ENST00000557258 EIF4G3O43432 1585 aaKnown RBP27.85■■■□□ 2.05
FOXN3-214ENST00000557258 SUPT6HQ7KZ85 1726 aaKnown RBP27.85■■■□□ 2.05
FOXN3-214ENST00000557258 CHMP7Q8WUX9 453 aaPredicted RBP27.85■■■□□ 2.05
FOXN3-214ENST00000557258 EHBP1L1Q8N3D4 1523 aa27.84■■■□□ 2.05
FOXN3-214ENST00000557258 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.84■■■□□ 2.05
FOXN3-214ENST00000557258 CCDC18Q5T9S5 1454 aa27.84■■■□□ 2.05
FOXN3-214ENST00000557258 THOC2Q8NI27 1593 aaKnown RBP27.8■■■□□ 2.04
FOXN3-214ENST00000557258 HECW1Q76N89 1606 aa27.79■■■□□ 2.04
FOXN3-214ENST00000557258 UGGT2Q9NYU1 1516 aa27.79■■■□□ 2.04
FOXN3-214ENST00000557258 GRIN2AQ12879 1464 aa27.78■■■□□ 2.04
FOXN3-214ENST00000557258 PTPN23Q9H3S7 1636 aa27.77■■■□□ 2.04
FOXN3-214ENST00000557258 HFM1A2PYH4 1435 aa27.76■■■□□ 2.03
FOXN3-214ENST00000557258 DISP1Q96F81 1524 aa27.76■■■□□ 2.03
FOXN3-214ENST00000557258 NAIPQ13075 1403 aa27.75■■■□□ 2.03
FOXN3-214ENST00000557258 KIAA0586Q9BVV6 1533 aa27.74■■■□□ 2.03
FOXN3-214ENST00000557258 ZNF644Q9H582 1327 aaPredicted RBP27.71■■■□□ 2.03
FOXN3-214ENST00000557258 TRIM52Q96A61 297 aa27.71■■■□□ 2.03
FOXN3-214ENST00000557258 ARHGEF11O15085 1522 aa27.69■■■□□ 2.02
FOXN3-214ENST00000557258 KIAA0556O60303 1618 aa27.69■■■□□ 2.02
FOXN3-214ENST00000557258 DDX10Q13206 875 aaKnown RBP27.67■■■□□ 2.02
FOXN3-214ENST00000557258 KCNH8Q96L42 1107 aa27.65■■■□□ 2.02
FOXN3-214ENST00000557258 UACAQ9BZF9 1416 aa27.65■■■□□ 2.02
FOXN3-214ENST00000557258 PPP1R15AO75807 674 aaPredicted RBP27.65■■■□□ 2.02
FOXN3-214ENST00000557258 NUP153P49790 1475 aaKnown RBP27.65■■■□□ 2.02
FOXN3-214ENST00000557258 TONSLQ96HA7 1378 aa27.65■■■□□ 2.02
FOXN3-214ENST00000557258 FOXD1Q16676 465 aa27.64■■■□□ 2.01
FOXN3-214ENST00000557258 CEP170Q5SW79 1584 aa27.62■■■□□ 2.01
FOXN3-214ENST00000557258 PLB1Q6P1J6 1458 aa27.62■■■□□ 2.01
FOXN3-214ENST00000557258 KDM6BO15054 1643 aa27.59■■■□□ 2.01
FOXN3-214ENST00000557258 JPH4Q96JJ6 628 aa27.58■■■□□ 2.01
FOXN3-214ENST00000557258 SYNJ2O15056 1496 aa27.58■■■□□ 2.01
FOXN3-214ENST00000557258 PRG4Q92954 1404 aaPredicted RBP27.58■■■□□ 2.01
FOXN3-214ENST00000557258 ZNF777Q9ULD5 760 aaPredicted RBP27.57■■■□□ 2
FOXN3-214ENST00000557258 MAGI1Q96QZ7 1491 aaPredicted RBP27.57■■■□□ 2
FOXN3-214ENST00000557258 TCOF1Q13428 1488 aaKnown RBP27.55■■■□□ 2
FOXN3-214ENST00000557258 RAPGEF6Q8TEU7 1601 aa27.54■■■□□ 2
FOXN3-214ENST00000557258 CDK11AQ9UQ88 783 aaPredicted RBP27.5■■□□□ 1.99
FOXN3-214ENST00000557258 TIMELESSQ9UNS1 1208 aa27.49■■□□□ 1.99
FOXN3-214ENST00000557258 MIA2Q96PC5 1412 aa27.49■■□□□ 1.99
FOXN3-214ENST00000557258 MPHOSPH9Q99550 1183 aa27.46■■□□□ 1.99
FOXN3-214ENST00000557258 DENND4BO75064 1496 aaPredicted RBP27.46■■□□□ 1.99
FOXN3-214ENST00000557258 CFDP1Q9UEE9 299 aaPredicted RBP27.45■■□□□ 1.98
FOXN3-214ENST00000557258 DAPK1P53355 1430 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms