RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 CTTNBP2Q8WZ74 1663 aa28.89■■■□□ 2.22
PSEN1-218ENST00000556864 SHROOM2Q13796 1616 aa28.88■■■□□ 2.21
PSEN1-218ENST00000556864 IQGAP2Q13576 1575 aa28.88■■■□□ 2.21
PSEN1-218ENST00000556864 GOLGA3Q08378 1498 aa28.85■■■□□ 2.21
PSEN1-218ENST00000556864 ARHGEF11O15085 1522 aa28.84■■■□□ 2.21
PSEN1-218ENST00000556864 RIMBP3CA6NJZ7 1639 aa28.8■■■□□ 2.2
PSEN1-218ENST00000556864 RIMBP3BA6NNM3 1639 aa28.8■■■□□ 2.2
PSEN1-218ENST00000556864 RIMBP3Q9UFD9 1639 aa28.8■■■□□ 2.2
PSEN1-218ENST00000556864 JPH4Q96JJ6 628 aa28.72■■■□□ 2.19
PSEN1-218ENST00000556864 PRG4Q92954 1404 aaPredicted RBP28.71■■■□□ 2.19
PSEN1-218ENST00000556864 UGGT2Q9NYU1 1516 aa28.7■■■□□ 2.19
PSEN1-218ENST00000556864 CARMIL2Q6F5E8 1435 aa28.65■■■□□ 2.18
PSEN1-218ENST00000556864 ERCC6L2Q5T890 1561 aa28.65■■■□□ 2.18
PSEN1-218ENST00000556864 ARAP1Q96P48 1450 aa28.61■■■□□ 2.17
PSEN1-218ENST00000556864 UBTFP17480 764 aaKnown RBP28.6■■■□□ 2.17
PSEN1-218ENST00000556864 KIAA0556O60303 1618 aa28.59■■■□□ 2.17
PSEN1-218ENST00000556864 EHMT2Q96KQ7 1210 aa28.58■■■□□ 2.17
PSEN1-218ENST00000556864 DISP1Q96F81 1524 aa28.57■■■□□ 2.16
PSEN1-218ENST00000556864 SAMD9Q5K651 1589 aa28.52■■■□□ 2.16
PSEN1-218ENST00000556864 EFCAB5A4FU69 1503 aa28.52■■■□□ 2.16
PSEN1-218ENST00000556864 TNIKQ9UKE5 1360 aa28.49■■■□□ 2.15
PSEN1-218ENST00000556864 PTPRGP23470 1445 aa28.42■■■□□ 2.14
PSEN1-218ENST00000556864 CYB5RLQ6IPT4 315 aa28.41■■■□□ 2.14
PSEN1-218ENST00000556864 RANGAP1P46060 587 aaPredicted RBP28.36■■■□□ 2.13
PSEN1-218ENST00000556864 FHOD3Q2V2M9 1422 aa28.31■■■□□ 2.12
PSEN1-218ENST00000556864 ARHGAP35Q9NRY4 1499 aa28.3■■■□□ 2.12
PSEN1-218ENST00000556864 CLIP1P30622 1438 aa28.28■■■□□ 2.12
PSEN1-218ENST00000556864 TTBK1Q5TCY1 1321 aaPredicted RBP28.28■■■□□ 2.12
PSEN1-218ENST00000556864 P3H3Q8IVL6 736 aa28.27■■■□□ 2.12
PSEN1-218ENST00000556864 ADCY10Q96PN6 1610 aa28.26■■■□□ 2.11
PSEN1-218ENST00000556864 UACAQ9BZF9 1416 aa28.26■■■□□ 2.11
PSEN1-218ENST00000556864 ABCC2Q92887 1545 aa28.25■■■□□ 2.11
PSEN1-218ENST00000556864 UHRF1BP1LA0JNW5 1464 aa28.25■■■□□ 2.11
PSEN1-218ENST00000556864 CEP162Q5TB80 1403 aa28.25■■■□□ 2.11
PSEN1-218ENST00000556864 LOC105371045A0A1W2PR82 267 aa28.23■■■□□ 2.11
PSEN1-218ENST00000556864 ABCA8O94911 1581 aa28.23■■■□□ 2.11
PSEN1-218ENST00000556864 FMN1Q68DA7 1419 aa28.2■■■□□ 2.11
PSEN1-218ENST00000556864 PLB1Q6P1J6 1458 aa28.19■■■□□ 2.1
PSEN1-218ENST00000556864 RAPGEF6Q8TEU7 1601 aa28.18■■■□□ 2.1
PSEN1-218ENST00000556864 NPM1P06748 294 aaKnown RBP eCLIP28.11■■■□□ 2.09
PSEN1-218ENST00000556864 KDM5BQ9UGL1 1544 aa28.09■■■□□ 2.09
PSEN1-218ENST00000556864 HECW1Q76N89 1606 aa28.07■■■□□ 2.08
PSEN1-218ENST00000556864 MAPKBP1O60336 1514 aa28.07■■■□□ 2.08
PSEN1-218ENST00000556864 ZCCHC11Q5TAX3 1644 aaKnown RBP28.06■■■□□ 2.08
PSEN1-218ENST00000556864 PCF11O94913 1555 aaKnown RBP28.03■■■□□ 2.08
PSEN1-218ENST00000556864 NUP153P49790 1475 aaKnown RBP28.02■■■□□ 2.08
PSEN1-218ENST00000556864 FYCO1Q9BQS8 1478 aa28■■■□□ 2.07
PSEN1-218ENST00000556864 CASKIN1Q8WXD9 1431 aa27.98■■■□□ 2.07
PSEN1-218ENST00000556864 ATP10BO94823 1461 aa27.92■■■□□ 2.06
PSEN1-218ENST00000556864 ASXL2Q76L83 1435 aa27.92■■■□□ 2.06
PSEN1-218ENST00000556864 CCDC18Q5T9S5 1454 aa27.91■■■□□ 2.06
PSEN1-218ENST00000556864 VPS8Q8N3P4 1428 aa27.91■■■□□ 2.06
PSEN1-218ENST00000556864 EPRSP07814 1512 aaKnown RBP27.89■■■□□ 2.06
PSEN1-218ENST00000556864 WDR7Q9Y4E6 1490 aa27.88■■■□□ 2.05
PSEN1-218ENST00000556864 ARID3CA6NKF2 412 aa27.87■■■□□ 2.05
PSEN1-218ENST00000556864 CDK13Q14004 1512 aaKnown RBP27.87■■■□□ 2.05
PSEN1-218ENST00000556864 ATP1B4Q9UN42 357 aaPredicted RBP27.86■■■□□ 2.05
PSEN1-218ENST00000556864 DIP2BQ9P265 1576 aa27.84■■■□□ 2.05
PSEN1-218ENST00000556864 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.83■■■□□ 2.05
PSEN1-218ENST00000556864 HNRNPUL2Q1KMD3 747 aaKnown RBP27.83■■■□□ 2.05
PSEN1-218ENST00000556864 ABCC10Q5T3U5 1492 aa27.83■■■□□ 2.04
PSEN1-218ENST00000556864 LRRIQ1Q96JM4 1722 aa27.81■■■□□ 2.04
PSEN1-218ENST00000556864 TRHP20396 242 aaPredicted RBP27.76■■■□□ 2.03
PSEN1-218ENST00000556864 GLI2P10070 1586 aa27.75■■■□□ 2.03
PSEN1-218ENST00000556864 KIF13AQ9H1H9 1805 aa27.74■■■□□ 2.03
PSEN1-218ENST00000556864 CDK11AQ9UQ88 783 aaPredicted RBP27.74■■■□□ 2.03
PSEN1-218ENST00000556864 CFAP43Q8NDM7 1665 aa27.73■■■□□ 2.03
PSEN1-218ENST00000556864 PLEKHD1A6NEE1 506 aa27.71■■■□□ 2.03
PSEN1-218ENST00000556864 TROQ12816 1431 aaPredicted RBP27.67■■■□□ 2.02
PSEN1-218ENST00000556864 FAM69CQ0P6D2 419 aa27.67■■■□□ 2.02
PSEN1-218ENST00000556864 KIF14Q15058 1648 aa27.67■■■□□ 2.02
PSEN1-218ENST00000556864 TIAM1Q13009 1591 aa27.66■■■□□ 2.02
PSEN1-218ENST00000556864 MAP3K4Q9Y6R4 1608 aa27.63■■■□□ 2.01
PSEN1-218ENST00000556864 MAP3K1Q13233 1512 aa27.63■■■□□ 2.01
PSEN1-218ENST00000556864 ABCA9Q8IUA7 1624 aa27.63■■■□□ 2.01
PSEN1-218ENST00000556864 EHBP1L1Q8N3D4 1523 aa27.62■■■□□ 2.01
PSEN1-218ENST00000556864 KCNH8Q96L42 1107 aa27.61■■■□□ 2.01
PSEN1-218ENST00000556864 MAGI3Q5TCQ9 1506 aa27.6■■■□□ 2.01
PSEN1-218ENST00000556864 MTUS2Q5JR59 1369 aa27.59■■■□□ 2.01
PSEN1-218ENST00000556864 APLP2Q06481 763 aa27.55■■■□□ 2
PSEN1-218ENST00000556864 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.55■■■□□ 2
PSEN1-218ENST00000556864 TTC37Q6PGP7 1564 aa27.55■■■□□ 2
PSEN1-218ENST00000556864 TEX14Q8IWB6 1497 aa27.53■■■□□ 2
PSEN1-218ENST00000556864 CD109Q6YHK3 1445 aa27.53■■■□□ 2
PSEN1-218ENST00000556864 LRRC9Q6ZRR7 1453 aa27.49■■□□□ 1.99
PSEN1-218ENST00000556864 PPRC1Q5VV67 1664 aaKnown RBP27.49■■□□□ 1.99
PSEN1-218ENST00000556864 TSPOAP1O95153 1857 aa27.48■■□□□ 1.99
PSEN1-218ENST00000556864 SUPT6HQ7KZ85 1726 aaKnown RBP27.47■■□□□ 1.99
PSEN1-218ENST00000556864 MYO5CQ9NQX4 1742 aa27.47■■□□□ 1.99
PSEN1-218ENST00000556864 CFAP74Q9C0B2 1584 aa27.44■■□□□ 1.98
PSEN1-218ENST00000556864 ARAP3Q8WWN8 1544 aa27.44■■□□□ 1.98
PSEN1-218ENST00000556864 PREX2Q70Z35 1606 aa27.41■■□□□ 1.98
PSEN1-218ENST00000556864 PLCH2O75038 1416 aa27.38■■□□□ 1.97
PSEN1-218ENST00000556864 NCOA2Q15596 1464 aa27.38■■□□□ 1.97
PSEN1-218ENST00000556864 NEO1Q92859 1461 aa27.38■■□□□ 1.97
PSEN1-218ENST00000556864 ITSN2Q9NZM3 1697 aa27.37■■□□□ 1.97
PSEN1-218ENST00000556864 FANCAO15360 1455 aa27.35■■□□□ 1.97
PSEN1-218ENST00000556864 ARHGAP5Q13017 1502 aa27.35■■□□□ 1.97
PSEN1-218ENST00000556864 CCNB3Q8WWL7 1395 aa27.35■■□□□ 1.97
PSEN1-218ENST00000556864 CDC42BPAQ5VT25 1732 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms