RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 THOC2Q8NI27 1593 aaKnown RBP13.79□□□□□ -0.2
ATXN3-236ENST00000556220 EVX2Q03828 476 aa13.77□□□□□ -0.21
ATXN3-236ENST00000556220 C19orf67A6NJJ6 358 aa13.76□□□□□ -0.21
ATXN3-236ENST00000556220 PDS5BQ9NTI5 1447 aa13.74□□□□□ -0.21
ATXN3-236ENST00000556220 BAZ1BQ9UIG0 1483 aaKnown RBP13.74□□□□□ -0.21
ATXN3-236ENST00000556220 SMARCA4P51532 1647 aa13.72□□□□□ -0.21
ATXN3-236ENST00000556220 LAMC3Q9Y6N6 1575 aa13.71□□□□□ -0.21
ATXN3-236ENST00000556220 FARP1Q9Y4F1 1045 aaPredicted RBP13.7□□□□□ -0.22
ATXN3-236ENST00000556220 PROM2Q8N271 834 aa13.64□□□□□ -0.23
ATXN3-236ENST00000556220 CADPSQ9ULU8 1353 aa13.63□□□□□ -0.23
ATXN3-236ENST00000556220 CREBZFQ9NS37 354 aa13.63□□□□□ -0.23
ATXN3-236ENST00000556220 BAZ1AQ9NRL2 1556 aaPredicted RBP13.62□□□□□ -0.23
ATXN3-236ENST00000556220 KIF21AQ7Z4S6 1674 aa13.61□□□□□ -0.23
ATXN3-236ENST00000556220 PEG3Q9GZU2 1588 aa13.61□□□□□ -0.23
ATXN3-236ENST00000556220 MRC2Q9UBG0 1479 aa13.6□□□□□ -0.23
ATXN3-236ENST00000556220 CD44P16070 742 aaKnown RBP13.56□□□□□ -0.24
ATXN3-236ENST00000556220 WDR62O43379 1518 aa13.55□□□□□ -0.24
ATXN3-236ENST00000556220 MROH2BQ7Z745 1585 aa13.51□□□□□ -0.25
ATXN3-236ENST00000556220 GABBR2O75899 941 aa13.51□□□□□ -0.25
ATXN3-236ENST00000556220 CLCN6P51797 869 aa13.47□□□□□ -0.25
ATXN3-236ENST00000556220 CEP164Q9UPV0 1460 aa13.45□□□□□ -0.26
ATXN3-236ENST00000556220 NPM1P06748 294 aaKnown RBP eCLIP13.44□□□□□ -0.26
ATXN3-236ENST00000556220 MNX1P50219 401 aaPredicted RBP13.43□□□□□ -0.26
ATXN3-236ENST00000556220 FANCD2Q9BXW9 1451 aa13.42□□□□□ -0.26
ATXN3-236ENST00000556220 ZRANB1Q9UGI0 708 aa13.39□□□□□ -0.27
ATXN3-236ENST00000556220 ZNF579Q8NAF0 562 aaKnown RBP13.38□□□□□ -0.27
ATXN3-236ENST00000556220 FKBP8Q14318 412 aa13.37□□□□□ -0.27
ATXN3-236ENST00000556220 CYB5RLQ6IPT4 315 aa13.37□□□□□ -0.27
ATXN3-236ENST00000556220 RIMBP3CA6NJZ7 1639 aa13.37□□□□□ -0.27
ATXN3-236ENST00000556220 RIMBP3BA6NNM3 1639 aa13.37□□□□□ -0.27
ATXN3-236ENST00000556220 RIMBP3Q9UFD9 1639 aa13.37□□□□□ -0.27
ATXN3-236ENST00000556220 PAK3O75914 559 aaPredicted RBP13.36□□□□□ -0.27
ATXN3-236ENST00000556220 CFTRP13569 1480 aa13.35□□□□□ -0.27
ATXN3-236ENST00000556220 ARHGEF11O15085 1522 aa13.33□□□□□ -0.28
ATXN3-236ENST00000556220 URB2Q14146 1524 aaKnown RBP13.33□□□□□ -0.28
ATXN3-236ENST00000556220 PLEKHG5O94827 1062 aa13.31□□□□□ -0.28
ATXN3-236ENST00000556220 MIER1Q8N108 512 aa13.29□□□□□ -0.28
ATXN3-236ENST00000556220 WIZO95785 1651 aa13.27□□□□□ -0.29
ATXN3-236ENST00000556220 ZNF608Q9ULD9 1512 aaPredicted RBP13.24□□□□□ -0.29
ATXN3-236ENST00000556220 IFT140Q96RY7 1462 aa13.23□□□□□ -0.29
ATXN3-236ENST00000556220 POTEIP0CG38 1075 aa13.2□□□□□ -0.3
ATXN3-236ENST00000556220 PLCD3Q8N3E9 789 aa13.2□□□□□ -0.3
ATXN3-236ENST00000556220 DCBLD2Q96PD2 775 aa13.2□□□□□ -0.3
ATXN3-236ENST00000556220 PHF12Q96QT6 1004 aa13.19□□□□□ -0.3
ATXN3-236ENST00000556220 ARAP1Q96P48 1450 aa13.17□□□□□ -0.3
ATXN3-236ENST00000556220 GALR2O43603 387 aaPredicted RBP13.16□□□□□ -0.3
ATXN3-236ENST00000556220 ZBTB47Q9UFB7 747 aaPredicted RBP13.15□□□□□ -0.3
ATXN3-236ENST00000556220 TSPYL2Q9H2G4 693 aaPredicted RBP13.14□□□□□ -0.31
ATXN3-236ENST00000556220 FBXO3Q9UK99 471 aa13.14□□□□□ -0.31
ATXN3-236ENST00000556220 RSF1Q96T23 1441 aaPredicted RBP13.13□□□□□ -0.31
ATXN3-236ENST00000556220 AQRO60306 1485 aaKnown RBP eCLIP13.1□□□□□ -0.31
ATXN3-236ENST00000556220 TOPBP1Q92547 1522 aa13.1□□□□□ -0.31
ATXN3-236ENST00000556220 TOP2AP11388 1531 aaKnown RBP13.09□□□□□ -0.31
ATXN3-236ENST00000556220 LHX8Q68G74 356 aa13.09□□□□□ -0.31
ATXN3-236ENST00000556220 CCDC61Q9Y6R9 512 aa13.09□□□□□ -0.31
ATXN3-236ENST00000556220 ABCC8Q09428 1581 aa13.07□□□□□ -0.32
ATXN3-236ENST00000556220 RASEFQ8IZ41 740 aa13.06□□□□□ -0.32
ATXN3-236ENST00000556220 EIF4G3O43432 1585 aaKnown RBP13.05□□□□□ -0.32
ATXN3-236ENST00000556220 MS4A3Q96HJ5 214 aa13.03□□□□□ -0.32
ATXN3-236ENST00000556220 CCDC88BA6NC98 1476 aa13.02□□□□□ -0.33
ATXN3-236ENST00000556220 KIF12Q96FN5 646 aa13.01□□□□□ -0.33
ATXN3-236ENST00000556220 NUBP1P53384 320 aa13□□□□□ -0.33
ATXN3-236ENST00000556220 CHD1O14646 1710 aa12.99□□□□□ -0.33
ATXN3-236ENST00000556220 CHMP7Q8WUX9 453 aaPredicted RBP12.99□□□□□ -0.33
ATXN3-236ENST00000556220 TDRD9Q8NDG6 1382 aaKnown RBP12.97□□□□□ -0.33
ATXN3-236ENST00000556220 DNMBPQ6XZF7 1577 aa12.97□□□□□ -0.33
ATXN3-236ENST00000556220 TARBP1Q13395 1621 aaKnown RBP12.96□□□□□ -0.33
ATXN3-236ENST00000556220 PRDM2Q13029 1718 aa12.95□□□□□ -0.34
ATXN3-236ENST00000556220 POLA1P09884 1462 aaPredicted RBP12.95□□□□□ -0.34
ATXN3-236ENST00000556220 ASTLQ6HA08 431 aaPredicted RBP12.94□□□□□ -0.34
ATXN3-236ENST00000556220 RAD54L2Q9Y4B4 1467 aa12.93□□□□□ -0.34
ATXN3-236ENST00000556220 FAM212AQ96EL1 285 aa12.93□□□□□ -0.34
ATXN3-236ENST00000556220 SOGA1O94964 1423 aa12.93□□□□□ -0.34
ATXN3-236ENST00000556220 MAP3K13O43283 966 aa12.92□□□□□ -0.34
ATXN3-236ENST00000556220 VASPP50552 380 aaPredicted RBP12.92□□□□□ -0.34
ATXN3-236ENST00000556220 CLASP1Q7Z460 1538 aa12.92□□□□□ -0.34
ATXN3-236ENST00000556220 SNAPC4Q5SXM2 1469 aa12.91□□□□□ -0.34
ATXN3-236ENST00000556220 ATMINO43313 823 aaPredicted RBP12.9□□□□□ -0.34
ATXN3-236ENST00000556220 SGIP1Q9BQI5 828 aa12.9□□□□□ -0.34
ATXN3-236ENST00000556220 PELP1Q8IZL8 1130 aaKnown RBP12.89□□□□□ -0.35
ATXN3-236ENST00000556220 SYNJ1O43426 1573 aa12.88□□□□□ -0.35
ATXN3-236ENST00000556220 GAPVD1Q14C86 1478 aa12.87□□□□□ -0.35
ATXN3-236ENST00000556220 MAGI1Q96QZ7 1491 aaPredicted RBP12.86□□□□□ -0.35
ATXN3-236ENST00000556220 C7P10643 843 aa12.84□□□□□ -0.35
ATXN3-236ENST00000556220 KLHL34Q8N239 644 aa12.84□□□□□ -0.35
ATXN3-236ENST00000556220 SLC39A7Q92504 469 aa12.84□□□□□ -0.35
ATXN3-236ENST00000556220 GRIN2BQ13224 1484 aa12.84□□□□□ -0.35
ATXN3-236ENST00000556220 TIE1P35590 1138 aa12.83□□□□□ -0.36
ATXN3-236ENST00000556220 PCDHB13Q9Y5F0 798 aa12.83□□□□□ -0.36
ATXN3-236ENST00000556220 SYNJ2O15056 1496 aa12.83□□□□□ -0.36
ATXN3-236ENST00000556220 DCAF8Q5TAQ9 597 aa12.82□□□□□ -0.36
ATXN3-236ENST00000556220 ATN1P54259 1190 aaPredicted RBP12.81□□□□□ -0.36
ATXN3-236ENST00000556220 BMP2KQ9NSY1 1161 aaPredicted RBP12.81□□□□□ -0.36
ATXN3-236ENST00000556220 WDR97A6NE52 1622 aa12.8□□□□□ -0.36
ATXN3-236ENST00000556220 METRNQ9UJH8 293 aa12.8□□□□□ -0.36
ATXN3-236ENST00000556220 TRPC6Q9Y210 931 aa12.8□□□□□ -0.36
ATXN3-236ENST00000556220 FGD5Q6ZNL6 1462 aa12.79□□□□□ -0.36
ATXN3-236ENST00000556220 POTEB2H3BUK9 544 aa12.76□□□□□ -0.37
ATXN3-236ENST00000556220 ILDR1Q86SU0 546 aaPredicted RBP12.76□□□□□ -0.37
ATXN3-236ENST00000556220 TTLL13PA6NNM8 815 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms