RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 WDR97A6NE52 1622 aa10.94□□□□□ -0.66
CHD8-209ENST00000555935 MSH5O43196 834 aa10.92□□□□□ -0.66
CHD8-209ENST00000555935 ARHGAP35Q9NRY4 1499 aa10.92□□□□□ -0.66
CHD8-209ENST00000555935 KIF27Q86VH2 1401 aa10.9□□□□□ -0.66
CHD8-209ENST00000555935 BICRAQ9NZM4 1560 aa10.9□□□□□ -0.66
CHD8-209ENST00000555935 ITGAEP38570 1179 aa10.89□□□□□ -0.67
CHD8-209ENST00000555935 ERICH6Q7L0X2 663 aa10.89□□□□□ -0.67
CHD8-209ENST00000555935 TRIM52Q96A61 297 aa10.89□□□□□ -0.67
CHD8-209ENST00000555935 CDK11AQ9UQ88 783 aaPredicted RBP10.89□□□□□ -0.67
CHD8-209ENST00000555935 ERICH6BQ5W0A0 696 aa10.88□□□□□ -0.67
CHD8-209ENST00000555935 TIAM1Q13009 1591 aa10.88□□□□□ -0.67
CHD8-209ENST00000555935 SIN3AQ96ST3 1273 aa10.85□□□□□ -0.67
CHD8-209ENST00000555935 LRRC9Q6ZRR7 1453 aa10.84□□□□□ -0.67
CHD8-209ENST00000555935 CUX1P39880 1505 aa10.81□□□□□ -0.68
CHD8-209ENST00000555935 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.81□□□□□ -0.68
CHD8-209ENST00000555935 PABPN1Q86U42 306 aaKnown RBP eCLIP10.81□□□□□ -0.68
CHD8-209ENST00000555935 PHLDB1Q86UU1 1377 aa10.81□□□□□ -0.68
CHD8-209ENST00000555935 PPP4R2Q9NY27 417 aa10.79□□□□□ -0.68
CHD8-209ENST00000555935 FHAD1B1AJZ9 1412 aa10.79□□□□□ -0.68
CHD8-209ENST00000555935 TONSLQ96HA7 1378 aa10.78□□□□□ -0.68
CHD8-209ENST00000555935 CFAP43Q8NDM7 1665 aa10.77□□□□□ -0.68
CHD8-209ENST00000555935 HNRNPUQ00839 825 aaKnown RBP eCLIP10.77□□□□□ -0.68
CHD8-209ENST00000555935 FAM50AQ14320 339 aaKnown RBP10.77□□□□□ -0.68
CHD8-209ENST00000555935 HIRIP3Q9BW71 556 aaPredicted RBP10.76□□□□□ -0.69
CHD8-209ENST00000555935 DEKP35659 375 aaKnown RBP10.74□□□□□ -0.69
CHD8-209ENST00000555935 IGF1RP08069 1367 aa10.72□□□□□ -0.69
CHD8-209ENST00000555935 UACAQ9BZF9 1416 aa10.72□□□□□ -0.69
CHD8-209ENST00000555935 HMGXB3Q12766 1538 aa10.71□□□□□ -0.69
CHD8-209ENST00000555935 IRX6P78412 446 aaPredicted RBP10.71□□□□□ -0.69
CHD8-209ENST00000555935 PCF11O94913 1555 aaKnown RBP10.7□□□□□ -0.7
CHD8-209ENST00000555935 CFTRP13569 1480 aa10.69□□□□□ -0.7
CHD8-209ENST00000555935 CCDC18Q5T9S5 1454 aa10.69□□□□□ -0.7
CHD8-209ENST00000555935 FYCO1Q9BQS8 1478 aa10.69□□□□□ -0.7
CHD8-209ENST00000555935 HFM1A2PYH4 1435 aa10.69□□□□□ -0.7
CHD8-209ENST00000555935 NOP58Q9Y2X3 529 aaKnown RBP10.69□□□□□ -0.7
CHD8-209ENST00000555935 CARMIL1Q5VZK9 1371 aa10.69□□□□□ -0.7
CHD8-209ENST00000555935 AQRO60306 1485 aaKnown RBP eCLIP10.68□□□□□ -0.74e-7■■■■■ 38.2
CHD8-209ENST00000555935 NCOA2Q15596 1464 aa10.68□□□□□ -0.7
CHD8-209ENST00000555935 NCAPD3P42695 1498 aa10.67□□□□□ -0.7
CHD8-209ENST00000555935 KDM5BQ9UGL1 1544 aa10.67□□□□□ -0.7
CHD8-209ENST00000555935 FGD6Q6ZV73 1430 aa10.66□□□□□ -0.7
CHD8-209ENST00000555935 ZBED9Q6R2W3 1325 aa10.66□□□□□ -0.7
CHD8-209ENST00000555935 CASKIN1Q8WXD9 1431 aa10.66□□□□□ -0.7
CHD8-209ENST00000555935 PRKCSHP14314 528 aaPredicted RBP10.66□□□□□ -0.7
CHD8-209ENST00000555935 CNTLNQ9NXG0 1405 aa10.66□□□□□ -0.7
CHD8-209ENST00000555935 FGD5Q6ZNL6 1462 aa10.65□□□□□ -0.7
CHD8-209ENST00000555935 PTPN23Q9H3S7 1636 aa10.65□□□□□ -0.7
CHD8-209ENST00000555935 EFCAB5A4FU69 1503 aa10.65□□□□□ -0.7
CHD8-209ENST00000555935 WASHC2AQ641Q2 1341 aa10.65□□□□□ -0.71
CHD8-209ENST00000555935 B4GALNT3Q6L9W6 998 aa10.63□□□□□ -0.71
CHD8-209ENST00000555935 HSPA5P11021 654 aaKnown RBP10.62□□□□□ -0.71
CHD8-209ENST00000555935 EIF4G2P78344 907 aaKnown RBP eCLIP10.61□□□□□ -0.71
CHD8-209ENST00000555935 NAIPQ13075 1403 aa10.61□□□□□ -0.71
CHD8-209ENST00000555935 FMN1Q68DA7 1419 aa10.61□□□□□ -0.71
CHD8-209ENST00000555935 PRKRIP1Q9H875 184 aaPredicted RBP10.6□□□□□ -0.71
CHD8-209ENST00000555935 ANP32AP39687 249 aaKnown RBP10.6□□□□□ -0.71
CHD8-209ENST00000555935 PTPRKQ15262 1439 aa10.6□□□□□ -0.71
CHD8-209ENST00000555935 PRDM2Q13029 1718 aa10.59□□□□□ -0.71
CHD8-209ENST00000555935 RTL5Q5HYW3 569 aaPredicted RBP10.59□□□□□ -0.71
CHD8-209ENST00000555935 IPO9Q96P70 1041 aaKnown RBP10.59□□□□□ -0.71
CHD8-209ENST00000555935 FHOD3Q2V2M9 1422 aa10.59□□□□□ -0.71
CHD8-209ENST00000555935 NCOA1Q15788 1441 aa10.59□□□□□ -0.71
CHD8-209ENST00000555935 PAK3O75914 559 aaPredicted RBP10.58□□□□□ -0.72
CHD8-209ENST00000555935 NBR1Q14596 966 aa10.58□□□□□ -0.72
CHD8-209ENST00000555935 MRS2Q9HD23 443 aa10.58□□□□□ -0.72
CHD8-209ENST00000555935 ATP1B4Q9UN42 357 aaPredicted RBP10.58□□□□□ -0.72
CHD8-209ENST00000555935 SMG6Q86US8 1419 aaKnown RBP10.58□□□□□ -0.72
CHD8-209ENST00000555935 CCDC7Q96M83 1385 aa10.58□□□□□ -0.72
CHD8-209ENST00000555935 CCDC184Q52MB2 194 aa10.57□□□□□ -0.72
CHD8-209ENST00000555935 FAM9BQ8IZU0 186 aa10.56□□□□□ -0.72
CHD8-209ENST00000555935 MTUS2Q5JR59 1369 aa10.56□□□□□ -0.72
CHD8-209ENST00000555935 MYOM3Q5VTT5 1437 aa10.56□□□□□ -0.72
CHD8-209ENST00000555935 RNF123Q5XPI4 1314 aa10.56□□□□□ -0.72
CHD8-209ENST00000555935 P3H3Q8IVL6 736 aa10.55□□□□□ -0.72
CHD8-209ENST00000555935 HECW1Q76N89 1606 aa10.55□□□□□ -0.72
CHD8-209ENST00000555935 ZBTB47Q9UFB7 747 aaPredicted RBP10.55□□□□□ -0.72
CHD8-209ENST00000555935 AKNAQ7Z591 1439 aa10.54□□□□□ -0.72
CHD8-209ENST00000555935 SNAPC4Q5SXM2 1469 aa10.54□□□□□ -0.72
CHD8-209ENST00000555935 ABCA5Q8WWZ7 1642 aa10.53□□□□□ -0.72
CHD8-209ENST00000555935 CCDC136Q96JN2 1154 aa10.53□□□□□ -0.72
CHD8-209ENST00000555935 NUDCQ9Y266 331 aa10.53□□□□□ -0.72
CHD8-209ENST00000555935 THOC2Q8NI27 1593 aaKnown RBP10.52□□□□□ -0.73
CHD8-209ENST00000555935 GCC2Q8IWJ2 1684 aa10.51□□□□□ -0.73
CHD8-209ENST00000555935 EHBP1L1Q8N3D4 1523 aa10.51□□□□□ -0.73
CHD8-209ENST00000555935 DENND4BO75064 1496 aaPredicted RBP10.5□□□□□ -0.73
CHD8-209ENST00000555935 CC2D2AQ9P2K1 1620 aa10.5□□□□□ -0.73
CHD8-209ENST00000555935 USP35Q9P2H5 1018 aa10.5□□□□□ -0.73
CHD8-209ENST00000555935 SUPT6HQ7KZ85 1726 aaKnown RBP10.5□□□□□ -0.73
CHD8-209ENST00000555935 CUL7Q14999 1698 aa10.49□□□□□ -0.73
CHD8-209ENST00000555935 CTTNBP2Q8WZ74 1663 aa10.49□□□□□ -0.73
CHD8-209ENST00000555935 TCOF1Q13428 1488 aaKnown RBP10.49□□□□□ -0.73
CHD8-209ENST00000555935 C11orf95C9JLR9 678 aaPredicted RBP10.49□□□□□ -0.73
CHD8-209ENST00000555935 CADPSQ9ULU8 1353 aa10.49□□□□□ -0.73
CHD8-209ENST00000555935 ANO8Q9HCE9 1232 aaPredicted RBP10.48□□□□□ -0.73
CHD8-209ENST00000555935 ARHGEF11O15085 1522 aa10.48□□□□□ -0.73
CHD8-209ENST00000555935 POLR1AO95602 1720 aaPredicted RBP10.48□□□□□ -0.73
CHD8-209ENST00000555935 SPATA31E1Q6ZUB1 1445 aa10.48□□□□□ -0.73
CHD8-209ENST00000555935 ABCA10Q8WWZ4 1543 aa10.48□□□□□ -0.73
CHD8-209ENST00000555935 UGGT2Q9NYU1 1516 aa10.48□□□□□ -0.73
CHD8-209ENST00000555935 L3MBTL2Q969R5 705 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms