RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 FKBP8Q14318 412 aa12.91□□□□□ -0.34
PCNX4-210ENST00000555740 DMRT2Q9Y5R5 561 aa12.91□□□□□ -0.34
PCNX4-210ENST00000555740 GAPVD1Q14C86 1478 aa12.91□□□□□ -0.34
PCNX4-210ENST00000555740 ADAMTS12P58397 1594 aa12.9□□□□□ -0.34
PCNX4-210ENST00000555740 PRXQ9BXM0 1461 aa12.89□□□□□ -0.35
PCNX4-210ENST00000555740 ZNF608Q9ULD9 1512 aaPredicted RBP12.89□□□□□ -0.35
PCNX4-210ENST00000555740 GRIN2BQ13224 1484 aa12.88□□□□□ -0.35
PCNX4-210ENST00000555740 IGF1RP08069 1367 aa12.85□□□□□ -0.35
PCNX4-210ENST00000555740 GOLGA3Q08378 1498 aa12.84□□□□□ -0.35
PCNX4-210ENST00000555740 MAGI1Q96QZ7 1491 aaPredicted RBP12.84□□□□□ -0.35
PCNX4-210ENST00000555740 AMER1Q5JTC6 1135 aaPredicted RBP12.83□□□□□ -0.36
PCNX4-210ENST00000555740 TDRD9Q8NDG6 1382 aaKnown RBP12.82□□□□□ -0.36
PCNX4-210ENST00000555740 AQRO60306 1485 aaKnown RBP eCLIP12.82□□□□□ -0.36
PCNX4-210ENST00000555740 RAPGEF2Q9Y4G8 1499 aa12.8□□□□□ -0.36
PCNX4-210ENST00000555740 FHAD1B1AJZ9 1412 aa12.79□□□□□ -0.36
PCNX4-210ENST00000555740 CTTNBP2Q8WZ74 1663 aa12.79□□□□□ -0.36
PCNX4-210ENST00000555740 SNAPC4Q5SXM2 1469 aa12.79□□□□□ -0.36
PCNX4-210ENST00000555740 CARMIL1Q5VZK9 1371 aa12.77□□□□□ -0.37
PCNX4-210ENST00000555740 SYNJ2O15056 1496 aa12.75□□□□□ -0.37
PCNX4-210ENST00000555740 ATF5Q9Y2D1 282 aaPredicted RBP12.74□□□□□ -0.37
PCNX4-210ENST00000555740 CHD1O14646 1710 aa12.73□□□□□ -0.37
PCNX4-210ENST00000555740 MYCNP04198 464 aaPredicted RBP12.73□□□□□ -0.37
PCNX4-210ENST00000555740 FAM9AQ8IZU1 332 aaPredicted RBP12.73□□□□□ -0.37
PCNX4-210ENST00000555740 TNIKQ9UKE5 1360 aa12.72□□□□□ -0.37
PCNX4-210ENST00000555740 GRIN2AQ12879 1464 aa12.72□□□□□ -0.37
PCNX4-210ENST00000555740 NUP160Q12769 1436 aa12.67□□□□□ -0.38
PCNX4-210ENST00000555740 CEP170Q5SW79 1584 aa12.67□□□□□ -0.38
PCNX4-210ENST00000555740 IQGAP2Q13576 1575 aa12.65□□□□□ -0.38
PCNX4-210ENST00000555740 EFCAB5A4FU69 1503 aa12.64□□□□□ -0.39
PCNX4-210ENST00000555740 SAMD9Q5K651 1589 aa12.64□□□□□ -0.39
PCNX4-210ENST00000555740 SHROOM2Q13796 1616 aa12.61□□□□□ -0.39
PCNX4-210ENST00000555740 CLASP1Q7Z460 1538 aa12.61□□□□□ -0.39
PCNX4-210ENST00000555740 KIAA0586Q9BVV6 1533 aa12.61□□□□□ -0.39
PCNX4-210ENST00000555740 CEP162Q5TB80 1403 aa12.61□□□□□ -0.39
PCNX4-210ENST00000555740 UGGT2Q9NYU1 1516 aa12.61□□□□□ -0.39
PCNX4-210ENST00000555740 LOC105371045A0A1W2PR82 267 aa12.61□□□□□ -0.39
PCNX4-210ENST00000555740 ATXN8OSP0DMR3 200 aa12.6□□□□□ -0.39
PCNX4-210ENST00000555740 CLIP1P30622 1438 aa12.56□□□□□ -0.4
PCNX4-210ENST00000555740 ARHGAP35Q9NRY4 1499 aa12.55□□□□□ -0.4
PCNX4-210ENST00000555740 KIAA0556O60303 1618 aa12.54□□□□□ -0.4
PCNX4-210ENST00000555740 DCAF8L1A6NGE4 600 aa12.54□□□□□ -0.4
PCNX4-210ENST00000555740 UBTFP17480 764 aaKnown RBP12.54□□□□□ -0.4
PCNX4-210ENST00000555740 ARAP1Q96P48 1450 aa12.54□□□□□ -0.4
PCNX4-210ENST00000555740 CHMP7Q8WUX9 453 aaPredicted RBP12.53□□□□□ -0.4
PCNX4-210ENST00000555740 DISP1Q96F81 1524 aa12.5□□□□□ -0.41
PCNX4-210ENST00000555740 VPS8Q8N3P4 1428 aa12.47□□□□□ -0.41
PCNX4-210ENST00000555740 PCF11O94913 1555 aaKnown RBP12.43□□□□□ -0.42
PCNX4-210ENST00000555740 CFAP43Q8NDM7 1665 aa12.43□□□□□ -0.42
PCNX4-210ENST00000555740 FYCO1Q9BQS8 1478 aa12.42□□□□□ -0.42
PCNX4-210ENST00000555740 FBLN2P98095 1184 aa12.42□□□□□ -0.42
PCNX4-210ENST00000555740 FHOD3Q2V2M9 1422 aa12.42□□□□□ -0.42
PCNX4-210ENST00000555740 FMN1Q68DA7 1419 aa12.41□□□□□ -0.42
PCNX4-210ENST00000555740 CARMIL2Q6F5E8 1435 aa12.41□□□□□ -0.42
PCNX4-210ENST00000555740 MAP3K1Q13233 1512 aa12.4□□□□□ -0.42
PCNX4-210ENST00000555740 HECW1Q76N89 1606 aa12.39□□□□□ -0.43
PCNX4-210ENST00000555740 CASKIN1Q8WXD9 1431 aa12.39□□□□□ -0.43
PCNX4-210ENST00000555740 LRRIQ1Q96JM4 1722 aa12.39□□□□□ -0.43
PCNX4-210ENST00000555740 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.39□□□□□ -0.43
PCNX4-210ENST00000555740 PRG4Q92954 1404 aaPredicted RBP12.38□□□□□ -0.43
PCNX4-210ENST00000555740 ABCA8O94911 1581 aa12.38□□□□□ -0.43
PCNX4-210ENST00000555740 ERCC6L2Q5T890 1561 aa12.38□□□□□ -0.43
PCNX4-210ENST00000555740 RAPGEF6Q8TEU7 1601 aa12.38□□□□□ -0.43
PCNX4-210ENST00000555740 U3KPZ7 1027 aaPredicted RBP12.38□□□□□ -0.43
PCNX4-210ENST00000555740 JPH4Q96JJ6 628 aa12.36□□□□□ -0.43
PCNX4-210ENST00000555740 OSCARQ8IYS5 282 aa12.34□□□□□ -0.43
PCNX4-210ENST00000555740 TIAM1Q13009 1591 aa12.34□□□□□ -0.43
PCNX4-210ENST00000555740 CCDC18Q5T9S5 1454 aa12.33□□□□□ -0.44
PCNX4-210ENST00000555740 UHRF1BP1LA0JNW5 1464 aa12.31□□□□□ -0.44
PCNX4-210ENST00000555740 ABCC2Q92887 1545 aa12.3□□□□□ -0.44
PCNX4-210ENST00000555740 NUP153P49790 1475 aaKnown RBP12.3□□□□□ -0.44
PCNX4-210ENST00000555740 ARHGEF11O15085 1522 aa12.29□□□□□ -0.44
PCNX4-210ENST00000555740 RIMBP3CA6NJZ7 1639 aa12.28□□□□□ -0.44
PCNX4-210ENST00000555740 RIMBP3BA6NNM3 1639 aa12.28□□□□□ -0.44
PCNX4-210ENST00000555740 RIMBP3Q9UFD9 1639 aa12.28□□□□□ -0.44
PCNX4-210ENST00000555740 EPRSP07814 1512 aaKnown RBP12.27□□□□□ -0.45
PCNX4-210ENST00000555740 PTPRGP23470 1445 aa12.27□□□□□ -0.45
PCNX4-210ENST00000555740 RANGAP1P46060 587 aaPredicted RBP12.27□□□□□ -0.45
PCNX4-210ENST00000555740 PLB1Q6P1J6 1458 aa12.26□□□□□ -0.45
PCNX4-210ENST00000555740 ADCY10Q96PN6 1610 aa12.26□□□□□ -0.45
PCNX4-210ENST00000555740 UACAQ9BZF9 1416 aa12.25□□□□□ -0.45
PCNX4-210ENST00000555740 EHBP1L1Q8N3D4 1523 aa12.25□□□□□ -0.45
PCNX4-210ENST00000555740 P3H3Q8IVL6 736 aa12.24□□□□□ -0.45
PCNX4-210ENST00000555740 ZCCHC11Q5TAX3 1644 aaKnown RBP12.23□□□□□ -0.45
PCNX4-210ENST00000555740 LRRC9Q6ZRR7 1453 aa12.23□□□□□ -0.45
PCNX4-210ENST00000555740 KDM5BQ9UGL1 1544 aa12.22□□□□□ -0.45
PCNX4-210ENST00000555740 CDK13Q14004 1512 aaKnown RBP12.22□□□□□ -0.45
PCNX4-210ENST00000555740 MAGI3Q5TCQ9 1506 aa12.21□□□□□ -0.45
PCNX4-210ENST00000555740 SUPT6HQ7KZ85 1726 aaKnown RBP12.2□□□□□ -0.46
PCNX4-210ENST00000555740 ATP10BO94823 1461 aa12.18□□□□□ -0.46
PCNX4-210ENST00000555740 SAMD1Q6SPF0 538 aaPredicted RBP12.17□□□□□ -0.46
PCNX4-210ENST00000555740 ZNF219Q9P2Y4 722 aaPredicted RBP12.15□□□□□ -0.46
PCNX4-210ENST00000555740 KIF14Q15058 1648 aa12.15□□□□□ -0.46
PCNX4-210ENST00000555740 TROQ12816 1431 aaPredicted RBP12.14□□□□□ -0.47
PCNX4-210ENST00000555740 ITSN2Q9NZM3 1697 aa12.13□□□□□ -0.47
PCNX4-210ENST00000555740 MAPKBP1O60336 1514 aa12.12□□□□□ -0.47
PCNX4-210ENST00000555740 MKRN4PQ13434 485 aaPredicted RBP12.12□□□□□ -0.47
PCNX4-210ENST00000555740 APLP2Q06481 763 aa12.12□□□□□ -0.47
PCNX4-210ENST00000555740 NCOA2Q15596 1464 aa12.1□□□□□ -0.47
PCNX4-210ENST00000555740 ABCC10Q5T3U5 1492 aa12.09□□□□□ -0.47
PCNX4-210ENST00000555740 MTUS2Q5JR59 1369 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms