RNA–Protein interactions for RNA: ENST00000555489.5

RPGRIP1-208, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,139 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-208ENST00000555489 LRRC9Q6ZRR7 1453 aa14.63□□□□□ -0.07
RPGRIP1-208ENST00000555489 CFAP43Q8NDM7 1665 aa14.61□□□□□ -0.07
RPGRIP1-208ENST00000555489 RAD54L2Q9Y4B4 1467 aa14.59□□□□□ -0.07
RPGRIP1-208ENST00000555489 PELP1Q8IZL8 1130 aaKnown RBP14.59□□□□□ -0.07
RPGRIP1-208ENST00000555489 FYCO1Q9BQS8 1478 aa14.58□□□□□ -0.07
RPGRIP1-208ENST00000555489 PCF11O94913 1555 aaKnown RBP14.58□□□□□ -0.08
RPGRIP1-208ENST00000555489 AQRO60306 1485 aaKnown RBP eCLIP14.58□□□□□ -0.08
RPGRIP1-208ENST00000555489 WDR97A6NE52 1622 aa14.57□□□□□ -0.08
RPGRIP1-208ENST00000555489 NESP48681 1621 aa14.57□□□□□ -0.08
RPGRIP1-208ENST00000555489 CTTNBP2Q8WZ74 1663 aa14.57□□□□□ -0.08
RPGRIP1-208ENST00000555489 CASKIN1Q8WXD9 1431 aa14.54□□□□□ -0.08
RPGRIP1-208ENST00000555489 URB2Q14146 1524 aaKnown RBP14.53□□□□□ -0.08
RPGRIP1-208ENST00000555489 FMN1Q68DA7 1419 aa14.52□□□□□ -0.08
RPGRIP1-208ENST00000555489 PDS5BQ9NTI5 1447 aa14.52□□□□□ -0.08
RPGRIP1-208ENST00000555489 PHLDB1Q86UU1 1377 aa14.52□□□□□ -0.09
RPGRIP1-208ENST00000555489 RAB3GAP2Q9H2M9 1393 aa14.52□□□□□ -0.09
RPGRIP1-208ENST00000555489 MIER1Q8N108 512 aa14.51□□□□□ -0.09
RPGRIP1-208ENST00000555489 ABCA5Q8WWZ7 1642 aa14.51□□□□□ -0.09
RPGRIP1-208ENST00000555489 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.51□□□□□ -0.09
RPGRIP1-208ENST00000555489 FHOD3Q2V2M9 1422 aa14.51□□□□□ -0.09
RPGRIP1-208ENST00000555489 SETD5Q9C0A6 1442 aa14.51□□□□□ -0.09
RPGRIP1-208ENST00000555489 GTF3C3Q9Y5Q9 886 aa14.5□□□□□ -0.09
RPGRIP1-208ENST00000555489 ITGAEP38570 1179 aa14.48□□□□□ -0.09
RPGRIP1-208ENST00000555489 GAPVD1Q14C86 1478 aa14.47□□□□□ -0.09
RPGRIP1-208ENST00000555489 MAPKBP1O60336 1514 aa14.46□□□□□ -0.09
RPGRIP1-208ENST00000555489 SAMD9Q5K651 1589 aa14.45□□□□□ -0.1
RPGRIP1-208ENST00000555489 P3H3Q8IVL6 736 aa14.45□□□□□ -0.1
RPGRIP1-208ENST00000555489 SNAPC4Q5SXM2 1469 aa14.45□□□□□ -0.1
RPGRIP1-208ENST00000555489 THOC2Q8NI27 1593 aaKnown RBP14.44□□□□□ -0.1
RPGRIP1-208ENST00000555489 FAM50AQ14320 339 aaKnown RBP14.42□□□□□ -0.1
RPGRIP1-208ENST00000555489 ATP1B4Q9UN42 357 aaPredicted RBP14.42□□□□□ -0.1
RPGRIP1-208ENST00000555489 YTHDC1Q96MU7 727 aaKnown RBP14.41□□□□□ -0.1
RPGRIP1-208ENST00000555489 TDRD9Q8NDG6 1382 aaKnown RBP14.41□□□□□ -0.1
RPGRIP1-208ENST00000555489 KIF21AQ7Z4S6 1674 aa14.4□□□□□ -0.1
RPGRIP1-208ENST00000555489 TIMELESSQ9UNS1 1208 aa14.4□□□□□ -0.1
RPGRIP1-208ENST00000555489 FGD6Q6ZV73 1430 aa14.39□□□□□ -0.11
RPGRIP1-208ENST00000555489 TARBP1Q13395 1621 aaKnown RBP14.38□□□□□ -0.11
RPGRIP1-208ENST00000555489 MTUS2Q5JR59 1369 aa14.38□□□□□ -0.11
RPGRIP1-208ENST00000555489 GRIN2BQ13224 1484 aa14.37□□□□□ -0.11
RPGRIP1-208ENST00000555489 EHBP1L1Q8N3D4 1523 aa14.35□□□□□ -0.11
RPGRIP1-208ENST00000555489 CCDC18Q5T9S5 1454 aa14.33□□□□□ -0.12
RPGRIP1-208ENST00000555489 SUPT6HQ7KZ85 1726 aaKnown RBP14.33□□□□□ -0.12
RPGRIP1-208ENST00000555489 MYOM3Q5VTT5 1437 aa14.32□□□□□ -0.12
RPGRIP1-208ENST00000555489 PBRM1Q86U86 1689 aa14.31□□□□□ -0.12
RPGRIP1-208ENST00000555489 HFM1A2PYH4 1435 aa14.31□□□□□ -0.12
RPGRIP1-208ENST00000555489 LRRIQ1Q96JM4 1722 aa14.31□□□□□ -0.12
RPGRIP1-208ENST00000555489 NCOA2Q15596 1464 aa14.31□□□□□ -0.12
RPGRIP1-208ENST00000555489 ADAMTS12P58397 1594 aa14.28□□□□□ -0.12
RPGRIP1-208ENST00000555489 IQGAP2Q13576 1575 aa14.28□□□□□ -0.12
RPGRIP1-208ENST00000555489 MRC2Q9UBG0 1479 aa14.28□□□□□ -0.12
RPGRIP1-208ENST00000555489 HECW1Q76N89 1606 aa14.28□□□□□ -0.12
RPGRIP1-208ENST00000555489 ARHGEF11O15085 1522 aa14.28□□□□□ -0.12
RPGRIP1-208ENST00000555489 UGGT2Q9NYU1 1516 aa14.27□□□□□ -0.12
RPGRIP1-208ENST00000555489 UACAQ9BZF9 1416 aa14.27□□□□□ -0.13
RPGRIP1-208ENST00000555489 PTPN23Q9H3S7 1636 aa14.26□□□□□ -0.13
RPGRIP1-208ENST00000555489 SIN3AQ96ST3 1273 aa14.24□□□□□ -0.13
RPGRIP1-208ENST00000555489 DNAJC5BQ9UF47 199 aa14.23□□□□□ -0.13
RPGRIP1-208ENST00000555489 TCOF1Q13428 1488 aaKnown RBP14.23□□□□□ -0.13
RPGRIP1-208ENST00000555489 NAIPQ13075 1403 aa14.23□□□□□ -0.13
RPGRIP1-208ENST00000555489 PTPRKQ15262 1439 aa14.22□□□□□ -0.13
RPGRIP1-208ENST00000555489 IFT140Q96RY7 1462 aa14.22□□□□□ -0.13
RPGRIP1-208ENST00000555489 PPP1R15AO75807 674 aaPredicted RBP14.21□□□□□ -0.13
RPGRIP1-208ENST00000555489 AKNAQ7Z591 1439 aa14.2□□□□□ -0.14
RPGRIP1-208ENST00000555489 EPRSP07814 1512 aaKnown RBP14.2□□□□□ -0.14
RPGRIP1-208ENST00000555489 MAGI3Q5TCQ9 1506 aa14.2□□□□□ -0.14
RPGRIP1-208ENST00000555489 MIA2Q96PC5 1412 aa14.19□□□□□ -0.14
RPGRIP1-208ENST00000555489 TONSLQ96HA7 1378 aa14.19□□□□□ -0.14
RPGRIP1-208ENST00000555489 WDR62O43379 1518 aa14.19□□□□□ -0.14
RPGRIP1-208ENST00000555489 GCC2Q8IWJ2 1684 aa14.17□□□□□ -0.14
RPGRIP1-208ENST00000555489 KIAA0586Q9BVV6 1533 aa14.15□□□□□ -0.14
RPGRIP1-208ENST00000555489 KIAA0556O60303 1618 aa14.12□□□□□ -0.15
RPGRIP1-208ENST00000555489 CDK13Q14004 1512 aaKnown RBP14.12□□□□□ -0.15
RPGRIP1-208ENST00000555489 DDX10Q13206 875 aaKnown RBP14.11□□□□□ -0.15
RPGRIP1-208ENST00000555489 ZNF608Q9ULD9 1512 aaPredicted RBP14.1□□□□□ -0.15
RPGRIP1-208ENST00000555489 GRIN2AQ12879 1464 aa14.09□□□□□ -0.15
RPGRIP1-208ENST00000555489 DISP1Q96F81 1524 aa14.09□□□□□ -0.15
RPGRIP1-208ENST00000555489 EIF4G3O43432 1585 aaKnown RBP14.08□□□□□ -0.16
RPGRIP1-208ENST00000555489 ROCK1Q13464 1354 aa14.07□□□□□ -0.16
RPGRIP1-208ENST00000555489 CCER2I3L3R5 266 aa14.07□□□□□ -0.16
RPGRIP1-208ENST00000555489 MAGI1Q96QZ7 1491 aaPredicted RBP14.07□□□□□ -0.16
RPGRIP1-208ENST00000555489 RAPGEF6Q8TEU7 1601 aa14.06□□□□□ -0.16
RPGRIP1-208ENST00000555489 CDK11AQ9UQ88 783 aaPredicted RBP14.06□□□□□ -0.16
RPGRIP1-208ENST00000555489 KDM5BQ9UGL1 1544 aa14.05□□□□□ -0.16
RPGRIP1-208ENST00000555489 NUP153P49790 1475 aaKnown RBP14.05□□□□□ -0.16
RPGRIP1-208ENST00000555489 ANP32CO43423 234 aa14.05□□□□□ -0.16
RPGRIP1-208ENST00000555489 RRP7BPQ9NSQ0 103 aa14.05□□□□□ -0.16
RPGRIP1-208ENST00000555489 DNMT1P26358 1616 aaKnown RBP14.04□□□□□ -0.16
RPGRIP1-208ENST00000555489 SUPT16HQ9Y5B9 1047 aaKnown RBP14.03□□□□□ -0.16
RPGRIP1-208ENST00000555489 DAPK1P53355 1430 aa14.03□□□□□ -0.16
RPGRIP1-208ENST00000555489 DENND4BO75064 1496 aaPredicted RBP14.02□□□□□ -0.16
RPGRIP1-208ENST00000555489 CHIC2Q9UKJ5 165 aa14.02□□□□□ -0.16
RPGRIP1-208ENST00000555489 TRIM52Q96A61 297 aa14.01□□□□□ -0.17
RPGRIP1-208ENST00000555489 SYNJ2O15056 1496 aa14.01□□□□□ -0.17
RPGRIP1-208ENST00000555489 KCNH8Q96L42 1107 aa14□□□□□ -0.17
RPGRIP1-208ENST00000555489 KDM6BO15054 1643 aa14□□□□□ -0.17
RPGRIP1-208ENST00000555489 ERCC6Q03468 1493 aa14□□□□□ -0.17
RPGRIP1-208ENST00000555489 MPHOSPH9Q99550 1183 aa13.99□□□□□ -0.17
RPGRIP1-208ENST00000555489 ITSN2Q9NZM3 1697 aa13.99□□□□□ -0.17
RPGRIP1-208ENST00000555489 ABCC5O15440 1437 aa13.98□□□□□ -0.17
RPGRIP1-208ENST00000555489 TROQ12816 1431 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms