RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 CLASP1Q7Z460 1538 aa16.24■□□□□ 0.19
PSEN1-213ENST00000555386 NUP160Q12769 1436 aa16.23■□□□□ 0.19
PSEN1-213ENST00000555386 PRXQ9BXM0 1461 aa16.19■□□□□ 0.18
PSEN1-213ENST00000555386 RIMBP3CA6NJZ7 1639 aa16.18■□□□□ 0.18
PSEN1-213ENST00000555386 RIMBP3BA6NNM3 1639 aa16.18■□□□□ 0.18
PSEN1-213ENST00000555386 RIMBP3Q9UFD9 1639 aa16.18■□□□□ 0.18
PSEN1-213ENST00000555386 ARHGEF11O15085 1522 aa16.17■□□□□ 0.18
PSEN1-213ENST00000555386 JPH4Q96JJ6 628 aa16.15■□□□□ 0.18
PSEN1-213ENST00000555386 KIAA0586Q9BVV6 1533 aa16.13■□□□□ 0.17
PSEN1-213ENST00000555386 RANGAP1P46060 587 aaPredicted RBP16.13■□□□□ 0.17
PSEN1-213ENST00000555386 ERCC6L2Q5T890 1561 aa16.12■□□□□ 0.17
PSEN1-213ENST00000555386 CTTNBP2Q8WZ74 1663 aa16.12■□□□□ 0.17
PSEN1-213ENST00000555386 UBTFP17480 764 aaKnown RBP16.1■□□□□ 0.17
PSEN1-213ENST00000555386 TTBK1Q5TCY1 1321 aaPredicted RBP16.1■□□□□ 0.17
PSEN1-213ENST00000555386 PRG4Q92954 1404 aaPredicted RBP16.1■□□□□ 0.17
PSEN1-213ENST00000555386 IQGAP2Q13576 1575 aa16.1■□□□□ 0.17
PSEN1-213ENST00000555386 KIF21BO75037 1637 aa16.1■□□□□ 0.17
PSEN1-213ENST00000555386 CYB5RLQ6IPT4 315 aa16.1■□□□□ 0.17
PSEN1-213ENST00000555386 SHROOM2Q13796 1616 aa16.09■□□□□ 0.17
PSEN1-213ENST00000555386 GOLGA3Q08378 1498 aa16.05■□□□□ 0.16
PSEN1-213ENST00000555386 ARAP1Q96P48 1450 aa16.05■□□□□ 0.16
PSEN1-213ENST00000555386 P3H3Q8IVL6 736 aa16.01■□□□□ 0.15
PSEN1-213ENST00000555386 CARMIL2Q6F5E8 1435 aa15.99■□□□□ 0.15
PSEN1-213ENST00000555386 UGGT2Q9NYU1 1516 aa15.98■□□□□ 0.15
PSEN1-213ENST00000555386 LOC105371045A0A1W2PR82 267 aa15.97■□□□□ 0.15
PSEN1-213ENST00000555386 DISP1Q96F81 1524 aa15.96■□□□□ 0.15
PSEN1-213ENST00000555386 KIAA0556O60303 1618 aa15.95■□□□□ 0.14
PSEN1-213ENST00000555386 TNIKQ9UKE5 1360 aa15.92■□□□□ 0.14
PSEN1-213ENST00000555386 PTPRGP23470 1445 aa15.92■□□□□ 0.14
PSEN1-213ENST00000555386 SAMD9Q5K651 1589 aa15.86■□□□□ 0.13
PSEN1-213ENST00000555386 FHOD3Q2V2M9 1422 aa15.86■□□□□ 0.13
PSEN1-213ENST00000555386 ADCY10Q96PN6 1610 aa15.83■□□□□ 0.12
PSEN1-213ENST00000555386 ARID3CA6NKF2 412 aa15.83■□□□□ 0.12
PSEN1-213ENST00000555386 EFCAB5A4FU69 1503 aa15.81■□□□□ 0.12
PSEN1-213ENST00000555386 PLB1Q6P1J6 1458 aa15.81■□□□□ 0.12
PSEN1-213ENST00000555386 NPM1P06748 294 aaKnown RBP eCLIP15.81■□□□□ 0.12
PSEN1-213ENST00000555386 ARHGAP35Q9NRY4 1499 aa15.8■□□□□ 0.12
PSEN1-213ENST00000555386 UACAQ9BZF9 1416 aa15.79■□□□□ 0.12
PSEN1-213ENST00000555386 CLIP1P30622 1438 aa15.79■□□□□ 0.12
PSEN1-213ENST00000555386 ATP1B4Q9UN42 357 aaPredicted RBP15.78■□□□□ 0.12
PSEN1-213ENST00000555386 TRHP20396 242 aaPredicted RBP15.77■□□□□ 0.11
PSEN1-213ENST00000555386 CEP162Q5TB80 1403 aa15.76■□□□□ 0.11
PSEN1-213ENST00000555386 ABCC2Q92887 1545 aa15.75■□□□□ 0.11
PSEN1-213ENST00000555386 ABCA8O94911 1581 aa15.74■□□□□ 0.11
PSEN1-213ENST00000555386 RAPGEF6Q8TEU7 1601 aa15.73■□□□□ 0.11
PSEN1-213ENST00000555386 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.72■□□□□ 0.11
PSEN1-213ENST00000555386 HNRNPUL2Q1KMD3 747 aaKnown RBP15.72■□□□□ 0.11
PSEN1-213ENST00000555386 UHRF1BP1LA0JNW5 1464 aa15.71■□□□□ 0.11
PSEN1-213ENST00000555386 ZCCHC11Q5TAX3 1644 aaKnown RBP15.7■□□□□ 0.1
PSEN1-213ENST00000555386 FMN1Q68DA7 1419 aa15.68■□□□□ 0.1
PSEN1-213ENST00000555386 KDM5BQ9UGL1 1544 aa15.66■□□□□ 0.1
PSEN1-213ENST00000555386 NUP153P49790 1475 aaKnown RBP15.65■□□□□ 0.1
PSEN1-213ENST00000555386 PCF11O94913 1555 aaKnown RBP15.64■□□□□ 0.09
PSEN1-213ENST00000555386 ATP10BO94823 1461 aa15.64■□□□□ 0.09
PSEN1-213ENST00000555386 ASXL2Q76L83 1435 aa15.64■□□□□ 0.09
PSEN1-213ENST00000555386 KCNH8Q96L42 1107 aa15.63■□□□□ 0.09
PSEN1-213ENST00000555386 MAPKBP1O60336 1514 aa15.62■□□□□ 0.09
PSEN1-213ENST00000555386 FAM69CQ0P6D2 419 aa15.62■□□□□ 0.09
PSEN1-213ENST00000555386 HECW1Q76N89 1606 aa15.62■□□□□ 0.09
PSEN1-213ENST00000555386 CDK13Q14004 1512 aaKnown RBP15.62■□□□□ 0.09
PSEN1-213ENST00000555386 KIF13AQ9H1H9 1805 aa15.6■□□□□ 0.09
PSEN1-213ENST00000555386 LRRIQ1Q96JM4 1722 aa15.6■□□□□ 0.09
PSEN1-213ENST00000555386 TSPOAP1O95153 1857 aa15.59■□□□□ 0.09
PSEN1-213ENST00000555386 CASKIN1Q8WXD9 1431 aa15.58■□□□□ 0.08
PSEN1-213ENST00000555386 EPRSP07814 1512 aaKnown RBP15.57■□□□□ 0.08
PSEN1-213ENST00000555386 WDR7Q9Y4E6 1490 aa15.56■□□□□ 0.08
PSEN1-213ENST00000555386 DIP2BQ9P265 1576 aa15.56■□□□□ 0.08
PSEN1-213ENST00000555386 ABCC10Q5T3U5 1492 aa15.56■□□□□ 0.08
PSEN1-213ENST00000555386 PLEKHD1A6NEE1 506 aa15.55■□□□□ 0.08
PSEN1-213ENST00000555386 FYCO1Q9BQS8 1478 aa15.55■□□□□ 0.08
PSEN1-213ENST00000555386 VPS8Q8N3P4 1428 aa15.52■□□□□ 0.08
PSEN1-213ENST00000555386 CDK11AQ9UQ88 783 aaPredicted RBP15.5■□□□□ 0.07
PSEN1-213ENST00000555386 CCDC18Q5T9S5 1454 aa15.5■□□□□ 0.07
PSEN1-213ENST00000555386 GLI2P10070 1586 aa15.46■□□□□ 0.07
PSEN1-213ENST00000555386 MAGI3Q5TCQ9 1506 aa15.44■□□□□ 0.06
PSEN1-213ENST00000555386 APLP2Q06481 763 aa15.44■□□□□ 0.06
PSEN1-213ENST00000555386 CD109Q6YHK3 1445 aa15.44■□□□□ 0.06
PSEN1-213ENST00000555386 KIF14Q15058 1648 aa15.44■□□□□ 0.06
PSEN1-213ENST00000555386 MAP3K4Q9Y6R4 1608 aa15.44■□□□□ 0.06
PSEN1-213ENST00000555386 TROQ12816 1431 aaPredicted RBP15.43■□□□□ 0.06
PSEN1-213ENST00000555386 MTUS2Q5JR59 1369 aa15.43■□□□□ 0.06
PSEN1-213ENST00000555386 CFAP43Q8NDM7 1665 aa15.42■□□□□ 0.06
PSEN1-213ENST00000555386 TTC37Q6PGP7 1564 aa15.42■□□□□ 0.06
PSEN1-213ENST00000555386 PPRC1Q5VV67 1664 aaKnown RBP15.4■□□□□ 0.06
PSEN1-213ENST00000555386 ABCA9Q8IUA7 1624 aa15.4■□□□□ 0.06
PSEN1-213ENST00000555386 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.4■□□□□ 0.06
PSEN1-213ENST00000555386 TIAM1Q13009 1591 aa15.39■□□□□ 0.05
PSEN1-213ENST00000555386 ADRA2BP18089 450 aa15.37■□□□□ 0.05
PSEN1-213ENST00000555386 KANK4Q5T7N3 995 aaPredicted RBP15.37■□□□□ 0.05
PSEN1-213ENST00000555386 PPARGC1BQ86YN6 1023 aaKnown RBP15.36■□□□□ 0.05
PSEN1-213ENST00000555386 MYO5CQ9NQX4 1742 aa15.35■□□□□ 0.05
PSEN1-213ENST00000555386 EHBP1L1Q8N3D4 1523 aa15.34■□□□□ 0.05
PSEN1-213ENST00000555386 TEX14Q8IWB6 1497 aa15.34■□□□□ 0.05
PSEN1-213ENST00000555386 LRRC9Q6ZRR7 1453 aa15.33■□□□□ 0.04
PSEN1-213ENST00000555386 SUPT6HQ7KZ85 1726 aaKnown RBP15.31■□□□□ 0.04
PSEN1-213ENST00000555386 KDM6BO15054 1643 aa15.31■□□□□ 0.04
PSEN1-213ENST00000555386 ZNF777Q9ULD5 760 aaPredicted RBP15.31■□□□□ 0.04
PSEN1-213ENST00000555386 CDC42BPAQ5VT25 1732 aa15.31■□□□□ 0.04
PSEN1-213ENST00000555386 ARHGAP5Q13017 1502 aa15.31■□□□□ 0.04
PSEN1-213ENST00000555386 CCNB3Q8WWL7 1395 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms