RNA–Protein interactions for RNA: ENST00000555233.5

PRKCH-214, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-214ENST00000555233 RTN4Q9NQC3 1192 aaKnown RBP10.74□□□□□ -0.69
PRKCH-214ENST00000555233 TDRD9Q8NDG6 1382 aaKnown RBP10.73□□□□□ -0.69
PRKCH-214ENST00000555233 ERICH3Q5RHP9 1530 aa10.73□□□□□ -0.69
PRKCH-214ENST00000555233 GAPVD1Q14C86 1478 aa10.72□□□□□ -0.69
PRKCH-214ENST00000555233 SNAPC4Q5SXM2 1469 aa10.7□□□□□ -0.7
PRKCH-214ENST00000555233 ZBTB22O15209 634 aa10.7□□□□□ -0.7
PRKCH-214ENST00000555233 GRIN2BQ13224 1484 aa10.69□□□□□ -0.7
PRKCH-214ENST00000555233 MAGI1Q96QZ7 1491 aaPredicted RBP10.68□□□□□ -0.7
PRKCH-214ENST00000555233 CUL7Q14999 1698 aa10.68□□□□□ -0.7
PRKCH-214ENST00000555233 CLASP1Q7Z460 1538 aa10.66□□□□□ -0.7
PRKCH-214ENST00000555233 CEP170Q5SW79 1584 aa10.65□□□□□ -0.71
PRKCH-214ENST00000555233 IGF1RP08069 1367 aa10.64□□□□□ -0.71
PRKCH-214ENST00000555233 SYNJ2O15056 1496 aa10.63□□□□□ -0.71
PRKCH-214ENST00000555233 KIF27Q86VH2 1401 aa10.63□□□□□ -0.71
PRKCH-214ENST00000555233 GRIN2AQ12879 1464 aa10.61□□□□□ -0.71
PRKCH-214ENST00000555233 PRXQ9BXM0 1461 aa10.61□□□□□ -0.71
PRKCH-214ENST00000555233 SHROOM2Q13796 1616 aa10.61□□□□□ -0.71
PRKCH-214ENST00000555233 NUP160Q12769 1436 aa10.6□□□□□ -0.71
PRKCH-214ENST00000555233 FHAD1B1AJZ9 1412 aa10.59□□□□□ -0.71
PRKCH-214ENST00000555233 KIF21BO75037 1637 aa10.58□□□□□ -0.72
PRKCH-214ENST00000555233 CTTNBP2Q8WZ74 1663 aa10.57□□□□□ -0.72
PRKCH-214ENST00000555233 HOXD11P31277 338 aaPredicted RBP10.57□□□□□ -0.72
PRKCH-214ENST00000555233 TRIM41Q8WV44 630 aa10.56□□□□□ -0.72
PRKCH-214ENST00000555233 ERCC6L2Q5T890 1561 aa10.53□□□□□ -0.72
PRKCH-214ENST00000555233 EEA1Q15075 1411 aa10.53□□□□□ -0.72
PRKCH-214ENST00000555233 FOXD4L1Q9NU39 408 aa10.53□□□□□ -0.72
PRKCH-214ENST00000555233 RAPGEF2Q9Y4G8 1499 aa10.53□□□□□ -0.72
PRKCH-214ENST00000555233 CNKSR2Q8WXI2 1034 aa10.51□□□□□ -0.73
PRKCH-214ENST00000555233 CARMIL1Q5VZK9 1371 aa10.51□□□□□ -0.73
PRKCH-214ENST00000555233 RIMBP3CA6NJZ7 1639 aa10.49□□□□□ -0.73
PRKCH-214ENST00000555233 RIMBP3BA6NNM3 1639 aa10.49□□□□□ -0.73
PRKCH-214ENST00000555233 RIMBP3Q9UFD9 1639 aa10.49□□□□□ -0.73
PRKCH-214ENST00000555233 KIAA0586Q9BVV6 1533 aa10.47□□□□□ -0.73
PRKCH-214ENST00000555233 IQGAP2Q13576 1575 aa10.47□□□□□ -0.73
PRKCH-214ENST00000555233 ARHGEF11O15085 1522 aa10.46□□□□□ -0.74
PRKCH-214ENST00000555233 SAMD9Q5K651 1589 aa10.45□□□□□ -0.74
PRKCH-214ENST00000555233 UGGT2Q9NYU1 1516 aa10.45□□□□□ -0.74
PRKCH-214ENST00000555233 DISP1Q96F81 1524 aa10.43□□□□□ -0.74
PRKCH-214ENST00000555233 ARAP1Q96P48 1450 aa10.42□□□□□ -0.74
PRKCH-214ENST00000555233 KIAA0556O60303 1618 aa10.41□□□□□ -0.74
PRKCH-214ENST00000555233 GOLGA3Q08378 1498 aa10.39□□□□□ -0.75
PRKCH-214ENST00000555233 OSCARQ8IYS5 282 aa10.39□□□□□ -0.75
PRKCH-214ENST00000555233 CHMP7Q8WUX9 453 aaPredicted RBP10.39□□□□□ -0.75
PRKCH-214ENST00000555233 LRRIQ1Q96JM4 1722 aa10.36□□□□□ -0.75
PRKCH-214ENST00000555233 FBLN2P98095 1184 aa10.35□□□□□ -0.75
PRKCH-214ENST00000555233 FAM9AQ8IZU1 332 aaPredicted RBP10.34□□□□□ -0.75
PRKCH-214ENST00000555233 PRG4Q92954 1404 aaPredicted RBP10.33□□□□□ -0.76
PRKCH-214ENST00000555233 ADCY10Q96PN6 1610 aa10.33□□□□□ -0.76
PRKCH-214ENST00000555233 ARHGAP35Q9NRY4 1499 aa10.32□□□□□ -0.76
PRKCH-214ENST00000555233 ABCA8O94911 1581 aa10.31□□□□□ -0.76
PRKCH-214ENST00000555233 EFCAB5A4FU69 1503 aa10.31□□□□□ -0.76
PRKCH-214ENST00000555233 JPH4Q96JJ6 628 aa10.29□□□□□ -0.76
PRKCH-214ENST00000555233 TNIKQ9UKE5 1360 aa10.28□□□□□ -0.76
PRKCH-214ENST00000555233 UHRF1BP1LA0JNW5 1464 aa10.24□□□□□ -0.77
PRKCH-214ENST00000555233 ABCC2Q92887 1545 aa10.24□□□□□ -0.77
PRKCH-214ENST00000555233 FKBP8Q14318 412 aa10.24□□□□□ -0.77
PRKCH-214ENST00000555233 FHOD3Q2V2M9 1422 aa10.24□□□□□ -0.77
PRKCH-214ENST00000555233 PLB1Q6P1J6 1458 aa10.23□□□□□ -0.77
PRKCH-214ENST00000555233 PCF11O94913 1555 aaKnown RBP10.23□□□□□ -0.77
PRKCH-214ENST00000555233 RAPGEF6Q8TEU7 1601 aa10.23□□□□□ -0.77
PRKCH-214ENST00000555233 RNF216Q9NWF9 866 aaPredicted RBP10.23□□□□□ -0.77
PRKCH-214ENST00000555233 KIF13AQ9H1H9 1805 aa10.23□□□□□ -0.77
PRKCH-214ENST00000555233 ZCCHC11Q5TAX3 1644 aaKnown RBP10.22□□□□□ -0.77
PRKCH-214ENST00000555233 LOC105371045A0A1W2PR82 267 aa10.21□□□□□ -0.77
PRKCH-214ENST00000555233 CEP162Q5TB80 1403 aa10.21□□□□□ -0.78
PRKCH-214ENST00000555233 NUP153P49790 1475 aaKnown RBP10.21□□□□□ -0.78
PRKCH-214ENST00000555233 KDM5BQ9UGL1 1544 aa10.21□□□□□ -0.78
PRKCH-214ENST00000555233 CARMIL2Q6F5E8 1435 aa10.2□□□□□ -0.78
PRKCH-214ENST00000555233 MAPKBP1O60336 1514 aa10.19□□□□□ -0.78
PRKCH-214ENST00000555233 PTPRGP23470 1445 aa10.17□□□□□ -0.78
PRKCH-214ENST00000555233 CLIP1P30622 1438 aa10.17□□□□□ -0.78
PRKCH-214ENST00000555233 UACAQ9BZF9 1416 aa10.17□□□□□ -0.78
PRKCH-214ENST00000555233 PPRC1Q5VV67 1664 aaKnown RBP10.16□□□□□ -0.78
PRKCH-214ENST00000555233 CFAP43Q8NDM7 1665 aa10.16□□□□□ -0.78
PRKCH-214ENST00000555233 MAGI3Q5TCQ9 1506 aa10.16□□□□□ -0.78
PRKCH-214ENST00000555233 DIP2BQ9P265 1576 aa10.15□□□□□ -0.78
PRKCH-214ENST00000555233 HECW1Q76N89 1606 aa10.15□□□□□ -0.79
PRKCH-214ENST00000555233 CDK13Q14004 1512 aaKnown RBP10.14□□□□□ -0.79
PRKCH-214ENST00000555233 ATP10BO94823 1461 aa10.14□□□□□ -0.79
PRKCH-214ENST00000555233 FYCO1Q9BQS8 1478 aa10.12□□□□□ -0.79
PRKCH-214ENST00000555233 UBTFP17480 764 aaKnown RBP10.12□□□□□ -0.79
PRKCH-214ENST00000555233 CYB5RLQ6IPT4 315 aa10.12□□□□□ -0.79
PRKCH-214ENST00000555233 CASKIN1Q8WXD9 1431 aa10.12□□□□□ -0.79
PRKCH-214ENST00000555233 DSG3P32926 999 aa10.11□□□□□ -0.79
PRKCH-214ENST00000555233 EPRSP07814 1512 aaKnown RBP10.11□□□□□ -0.79
PRKCH-214ENST00000555233 MAP3K4Q9Y6R4 1608 aa10.11□□□□□ -0.79
PRKCH-214ENST00000555233 FMN1Q68DA7 1419 aa10.09□□□□□ -0.79
PRKCH-214ENST00000555233 KIF14Q15058 1648 aa10.09□□□□□ -0.79
PRKCH-214ENST00000555233 P3H3Q8IVL6 736 aa10.09□□□□□ -0.79
PRKCH-214ENST00000555233 SP7Q8TDD2 431 aaPredicted RBP10.09□□□□□ -0.79
PRKCH-214ENST00000555233 GLI2P10070 1586 aa10.09□□□□□ -0.79
PRKCH-214ENST00000555233 VPS8Q8N3P4 1428 aa10.08□□□□□ -0.8
PRKCH-214ENST00000555233 ABCA9Q8IUA7 1624 aa10.08□□□□□ -0.8
PRKCH-214ENST00000555233 TIAM1Q13009 1591 aa10.07□□□□□ -0.8
PRKCH-214ENST00000555233 TTC37Q6PGP7 1564 aa10.07□□□□□ -0.8
PRKCH-214ENST00000555233 ASXL2Q76L83 1435 aa10.07□□□□□ -0.8
PRKCH-214ENST00000555233 ABCC10Q5T3U5 1492 aa10.06□□□□□ -0.8
PRKCH-214ENST00000555233 ATXN8OSP0DMR3 200 aa10.06□□□□□ -0.8
PRKCH-214ENST00000555233 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.06□□□□□ -0.8
PRKCH-214ENST00000555233 WDR7Q9Y4E6 1490 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms