RNA–Protein interactions for RNA: ENST00000555094.5

GABRB3-208, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,494 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-208ENST00000555094 SYNJ2O15056 1496 aa17.27■□□□□ 0.35
GABRB3-208ENST00000555094 GRIN2AQ12879 1464 aa17.27■□□□□ 0.35
GABRB3-208ENST00000555094 ARAP1Q96P48 1450 aa17.27■□□□□ 0.35
GABRB3-208ENST00000555094 ARHGAP35Q9NRY4 1499 aa17.26■□□□□ 0.35
GABRB3-208ENST00000555094 EFCAB5A4FU69 1503 aa17.23■□□□□ 0.35
GABRB3-208ENST00000555094 VPS8Q8N3P4 1428 aa17.22■□□□□ 0.35
GABRB3-208ENST00000555094 IQGAP2Q13576 1575 aa17.21■□□□□ 0.35
GABRB3-208ENST00000555094 SAMD9Q5K651 1589 aa17.21■□□□□ 0.35
GABRB3-208ENST00000555094 RANGAP1P46060 587 aaPredicted RBP17.2■□□□□ 0.34
GABRB3-208ENST00000555094 CEP170Q5SW79 1584 aa17.19■□□□□ 0.34
GABRB3-208ENST00000555094 CHD1O14646 1710 aa17.19■□□□□ 0.34
GABRB3-208ENST00000555094 NUP160Q12769 1436 aa17.15■□□□□ 0.34
GABRB3-208ENST00000555094 KIAA0586Q9BVV6 1533 aa17.14■□□□□ 0.33
GABRB3-208ENST00000555094 UGGT2Q9NYU1 1516 aa17.13■□□□□ 0.33
GABRB3-208ENST00000555094 CHMP7Q8WUX9 453 aaPredicted RBP17.12■□□□□ 0.33
GABRB3-208ENST00000555094 FHOD3Q2V2M9 1422 aa17.1■□□□□ 0.33
GABRB3-208ENST00000555094 PCF11O94913 1555 aaKnown RBP17.07■□□□□ 0.32
GABRB3-208ENST00000555094 KIAA0556O60303 1618 aa17.06■□□□□ 0.32
GABRB3-208ENST00000555094 FBLN2P98095 1184 aa17.05■□□□□ 0.32
GABRB3-208ENST00000555094 DISP1Q96F81 1524 aa17.03■□□□□ 0.32
GABRB3-208ENST00000555094 CFAP43Q8NDM7 1665 aa17.01■□□□□ 0.31
GABRB3-208ENST00000555094 FYCO1Q9BQS8 1478 aa17.01■□□□□ 0.31
GABRB3-208ENST00000555094 P3H3Q8IVL6 736 aa17■□□□□ 0.31
GABRB3-208ENST00000555094 FMN1Q68DA7 1419 aa17■□□□□ 0.31
GABRB3-208ENST00000555094 SHROOM2Q13796 1616 aa16.99■□□□□ 0.31
GABRB3-208ENST00000555094 PLPPR3Q6T4P5 718 aa16.99■□□□□ 0.31
GABRB3-208ENST00000555094 CASKIN1Q8WXD9 1431 aa16.98■□□□□ 0.31
GABRB3-208ENST00000555094 CLASP1Q7Z460 1538 aa16.98■□□□□ 0.31
GABRB3-208ENST00000555094 TIAM1Q13009 1591 aa16.97■□□□□ 0.31
GABRB3-208ENST00000555094 MAP3K1Q13233 1512 aa16.96■□□□□ 0.31
GABRB3-208ENST00000555094 PPARGC1BQ86YN6 1023 aaKnown RBP16.96■□□□□ 0.31
GABRB3-208ENST00000555094 LRRIQ1Q96JM4 1722 aa16.96■□□□□ 0.31
GABRB3-208ENST00000555094 SENP3Q9H4L4 574 aaPredicted RBP16.92■□□□□ 0.3
GABRB3-208ENST00000555094 HECW1Q76N89 1606 aa16.92■□□□□ 0.3
GABRB3-208ENST00000555094 CARMIL2Q6F5E8 1435 aa16.9■□□□□ 0.3
GABRB3-208ENST00000555094 JPH4Q96JJ6 628 aa16.9■□□□□ 0.3
GABRB3-208ENST00000555094 APLP2Q06481 763 aa16.89■□□□□ 0.29
GABRB3-208ENST00000555094 TRIM26Q12899 539 aaPredicted RBP16.89■□□□□ 0.29
GABRB3-208ENST00000555094 RAPGEF6Q8TEU7 1601 aa16.87■□□□□ 0.29
GABRB3-208ENST00000555094 PRG4Q92954 1404 aaPredicted RBP16.87■□□□□ 0.29
GABRB3-208ENST00000555094 TTBK1Q5TCY1 1321 aaPredicted RBP16.85■□□□□ 0.29
GABRB3-208ENST00000555094 LRRC9Q6ZRR7 1453 aa16.84■□□□□ 0.29
GABRB3-208ENST00000555094 PCGF6Q9BYE7 350 aa16.84■□□□□ 0.29
GABRB3-208ENST00000555094 ERCC6L2Q5T890 1561 aa16.84■□□□□ 0.29
GABRB3-208ENST00000555094 CCDC18Q5T9S5 1454 aa16.83■□□□□ 0.29
GABRB3-208ENST00000555094 KANK4Q5T7N3 995 aaPredicted RBP16.83■□□□□ 0.28
GABRB3-208ENST00000555094 ABCA8O94911 1581 aa16.81■□□□□ 0.28
GABRB3-208ENST00000555094 EPRSP07814 1512 aaKnown RBP16.8■□□□□ 0.28
GABRB3-208ENST00000555094 NUP153P49790 1475 aaKnown RBP16.8■□□□□ 0.28
GABRB3-208ENST00000555094 PLB1Q6P1J6 1458 aa16.78■□□□□ 0.28
GABRB3-208ENST00000555094 CDK13Q14004 1512 aaKnown RBP16.78■□□□□ 0.28
GABRB3-208ENST00000555094 ATP1B4Q9UN42 357 aaPredicted RBP16.77■□□□□ 0.28
GABRB3-208ENST00000555094 EHBP1L1Q8N3D4 1523 aa16.77■□□□□ 0.27
GABRB3-208ENST00000555094 MAGI3Q5TCQ9 1506 aa16.76■□□□□ 0.27
GABRB3-208ENST00000555094 PTPRGP23470 1445 aa16.73■□□□□ 0.27
GABRB3-208ENST00000555094 SUPT6HQ7KZ85 1726 aaKnown RBP16.71■□□□□ 0.27
GABRB3-208ENST00000555094 MTUS2Q5JR59 1369 aa16.7■□□□□ 0.26
GABRB3-208ENST00000555094 RRBP1Q9P2E9 1410 aaKnown RBP16.69■□□□□ 0.26
GABRB3-208ENST00000555094 ARHGEF11O15085 1522 aa16.68■□□□□ 0.26
GABRB3-208ENST00000555094 OSCARQ8IYS5 282 aa16.67■□□□□ 0.26
GABRB3-208ENST00000555094 ABCC2Q92887 1545 aa16.67■□□□□ 0.26
GABRB3-208ENST00000555094 PHLDB1Q86UU1 1377 aa16.67■□□□□ 0.26
GABRB3-208ENST00000555094 UACAQ9BZF9 1416 aa16.66■□□□□ 0.26
GABRB3-208ENST00000555094 NCOA2Q15596 1464 aa16.66■□□□□ 0.26
GABRB3-208ENST00000555094 ADCY10Q96PN6 1610 aa16.65■□□□□ 0.26
GABRB3-208ENST00000555094 ATP10BO94823 1461 aa16.63■□□□□ 0.25
GABRB3-208ENST00000555094 ARID3CA6NKF2 412 aa16.63■□□□□ 0.25
GABRB3-208ENST00000555094 UHRF1BP1LA0JNW5 1464 aa16.63■□□□□ 0.25
GABRB3-208ENST00000555094 TROQ12816 1431 aaPredicted RBP16.61■□□□□ 0.25
GABRB3-208ENST00000555094 CCNB3Q8WWL7 1395 aa16.6■□□□□ 0.25
GABRB3-208ENST00000555094 KIF14Q15058 1648 aa16.59■□□□□ 0.25
GABRB3-208ENST00000555094 ZCCHC11Q5TAX3 1644 aaKnown RBP16.58■□□□□ 0.25
GABRB3-208ENST00000555094 MYOM3Q5VTT5 1437 aa16.57■□□□□ 0.24
GABRB3-208ENST00000555094 FGD6Q6ZV73 1430 aa16.57■□□□□ 0.24
GABRB3-208ENST00000555094 KDM5BQ9UGL1 1544 aa16.55■□□□□ 0.24
GABRB3-208ENST00000555094 CDK11AQ9UQ88 783 aaPredicted RBP16.54■□□□□ 0.24
GABRB3-208ENST00000555094 ITSN2Q9NZM3 1697 aa16.53■□□□□ 0.24
GABRB3-208ENST00000555094 PTPN23Q9H3S7 1636 aa16.53■□□□□ 0.24
GABRB3-208ENST00000555094 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.53■□□□□ 0.24
GABRB3-208ENST00000555094 HNRNPUL2Q1KMD3 747 aaKnown RBP16.53■□□□□ 0.24
GABRB3-208ENST00000555094 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.51■□□□□ 0.23
GABRB3-208ENST00000555094 TCOF1Q13428 1488 aaKnown RBP16.51■□□□□ 0.23
GABRB3-208ENST00000555094 ABCC10Q5T3U5 1492 aa16.5■□□□□ 0.23
GABRB3-208ENST00000555094 CDC42BPAQ5VT25 1732 aa16.49■□□□□ 0.23
GABRB3-208ENST00000555094 MIA2Q96PC5 1412 aa16.48■□□□□ 0.23
GABRB3-208ENST00000555094 RIMBP3CA6NJZ7 1639 aa16.48■□□□□ 0.23
GABRB3-208ENST00000555094 RIMBP3BA6NNM3 1639 aa16.48■□□□□ 0.23
GABRB3-208ENST00000555094 RIMBP3Q9UFD9 1639 aa16.48■□□□□ 0.23
GABRB3-208ENST00000555094 PLEKHD1A6NEE1 506 aa16.46■□□□□ 0.23
GABRB3-208ENST00000555094 TTC37Q6PGP7 1564 aa16.45■□□□□ 0.22
GABRB3-208ENST00000555094 GPATCH8Q9UKJ3 1502 aaKnown RBP16.44■□□□□ 0.22
GABRB3-208ENST00000555094 PREX2Q70Z35 1606 aa16.44■□□□□ 0.22
GABRB3-208ENST00000555094 FAM50AQ14320 339 aaKnown RBP16.43■□□□□ 0.22
GABRB3-208ENST00000555094 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.42■□□□□ 0.22
GABRB3-208ENST00000555094 MYO5CQ9NQX4 1742 aa16.4■□□□□ 0.22
GABRB3-208ENST00000555094 CDC42BPBQ9Y5S2 1711 aa16.4■□□□□ 0.22
GABRB3-208ENST00000555094 CAMSAP2Q08AD1 1489 aa16.39■□□□□ 0.21
GABRB3-208ENST00000555094 WDR7Q9Y4E6 1490 aa16.39■□□□□ 0.21
GABRB3-208ENST00000555094 DNMT1P26358 1616 aaKnown RBP16.39■□□□□ 0.21
GABRB3-208ENST00000555094 CROCC2H7BZ55 1655 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms