RNA–Protein interactions for RNA: ENST00000554929.1

SRSF5-208, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-208ENST00000554929 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.61■□□□□ 0.577e-64■■□□□ 12.3
SRSF5-208ENST00000554929 SOGA1O94964 1423 aa18.59■□□□□ 0.57
SRSF5-208ENST00000554929 KDM4FA0A1W2PPD8 638 aa18.57■□□□□ 0.56
SRSF5-208ENST00000554929 MAGI1Q96QZ7 1491 aaPredicted RBP18.55■□□□□ 0.56
SRSF5-208ENST00000554929 SYNJ2O15056 1496 aa18.52■□□□□ 0.56
SRSF5-208ENST00000554929 GRIN2BQ13224 1484 aa18.49■□□□□ 0.55
SRSF5-208ENST00000554929 KIF13AQ9H1H9 1805 aa18.49■□□□□ 0.55
SRSF5-208ENST00000554929 ERCC6L2Q5T890 1561 aa18.47■□□□□ 0.55
SRSF5-208ENST00000554929 WDR97A6NE52 1622 aa18.45■□□□□ 0.54
SRSF5-208ENST00000554929 FGD5Q6ZNL6 1462 aa18.42■□□□□ 0.54
SRSF5-208ENST00000554929 FAM69CQ0P6D2 419 aa18.41■□□□□ 0.54
SRSF5-208ENST00000554929 SLC4A2P04920 1241 aa18.37■□□□□ 0.53
SRSF5-208ENST00000554929 U3KPZ7 1027 aaPredicted RBP18.36■□□□□ 0.53
SRSF5-208ENST00000554929 PBRM1Q86U86 1689 aa18.34■□□□□ 0.53
SRSF5-208ENST00000554929 CEP170Q5SW79 1584 aa18.33■□□□□ 0.52
SRSF5-208ENST00000554929 KDM6BO15054 1643 aa18.31■□□□□ 0.52
SRSF5-208ENST00000554929 ABCC10Q5T3U5 1492 aa18.28■□□□□ 0.52
SRSF5-208ENST00000554929 NPM1P06748 294 aaKnown RBP eCLIP18.26■□□□□ 0.51
SRSF5-208ENST00000554929 CUX1P39880 1505 aa18.25■□□□□ 0.51
SRSF5-208ENST00000554929 GRIN2AQ12879 1464 aa18.25■□□□□ 0.51
SRSF5-208ENST00000554929 TSPOAP1O95153 1857 aa18.2■□□□□ 0.5
SRSF5-208ENST00000554929 NUP160Q12769 1436 aa18.2■□□□□ 0.5
SRSF5-208ENST00000554929 SHROOM2Q13796 1616 aa18.2■□□□□ 0.5
SRSF5-208ENST00000554929 DIP2BQ9P265 1576 aa18.19■□□□□ 0.5
SRSF5-208ENST00000554929 HECW2Q9P2P5 1572 aa18.19■□□□□ 0.5
SRSF5-208ENST00000554929 PRG4Q92954 1404 aaPredicted RBP18.16■□□□□ 0.5
SRSF5-208ENST00000554929 ADGRL1O94910 1474 aa18.16■□□□□ 0.5
SRSF5-208ENST00000554929 FBXO41Q8TF61 875 aa18.16■□□□□ 0.5
SRSF5-208ENST00000554929 ABCA5Q8WWZ7 1642 aa18.16■□□□□ 0.5
SRSF5-208ENST00000554929 MAPKBP1O60336 1514 aa18.13■□□□□ 0.49
SRSF5-208ENST00000554929 ABCA10Q8WWZ4 1543 aa18.13■□□□□ 0.49
SRSF5-208ENST00000554929 JPH4Q96JJ6 628 aa18.11■□□□□ 0.49
SRSF5-208ENST00000554929 ADAMTS12P58397 1594 aa18.09■□□□□ 0.49
SRSF5-208ENST00000554929 FHAD1B1AJZ9 1412 aa18.04■□□□□ 0.48
SRSF5-208ENST00000554929 ADCY10Q96PN6 1610 aa18.03■□□□□ 0.48
SRSF5-208ENST00000554929 SPINK5Q9NQ38 1064 aaPredicted RBP18.02■□□□□ 0.48
SRSF5-208ENST00000554929 LMTK3Q96Q04 1460 aa17.95■□□□□ 0.46
SRSF5-208ENST00000554929 SLC4A1APQ9BWU0 796 aaKnown RBP17.95■□□□□ 0.46
SRSF5-208ENST00000554929 WRNQ14191 1432 aaPredicted RBP eCLIP17.91■□□□□ 0.46
SRSF5-208ENST00000554929 COL17A1Q9UMD9 1497 aaPredicted RBP17.88■□□□□ 0.45
SRSF5-208ENST00000554929 ERICH3Q5RHP9 1530 aa17.88■□□□□ 0.45
SRSF5-208ENST00000554929 PPRC1Q5VV67 1664 aaKnown RBP17.87■□□□□ 0.45
SRSF5-208ENST00000554929 CAPN15O75808 1086 aa17.87■□□□□ 0.45
SRSF5-208ENST00000554929 TTBK1Q5TCY1 1321 aaPredicted RBP17.87■□□□□ 0.45
SRSF5-208ENST00000554929 RUSC2Q8N2Y8 1516 aa17.86■□□□□ 0.45
SRSF5-208ENST00000554929 DSG3P32926 999 aa17.84■□□□□ 0.45
SRSF5-208ENST00000554929 SOCS7O14512 581 aa17.81■□□□□ 0.44
SRSF5-208ENST00000554929 ASXL2Q76L83 1435 aa17.81■□□□□ 0.44
SRSF5-208ENST00000554929 TOP2BQ02880 1626 aa17.8■□□□□ 0.44
SRSF5-208ENST00000554929 GLI2P10070 1586 aa17.79■□□□□ 0.44
SRSF5-208ENST00000554929 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.79■□□□□ 0.44
SRSF5-208ENST00000554929 HNRNPUL2Q1KMD3 747 aaKnown RBP17.79■□□□□ 0.44
SRSF5-208ENST00000554929 ILDR2Q71H61 639 aa17.79■□□□□ 0.44
SRSF5-208ENST00000554929 PLB1Q6P1J6 1458 aa17.78■□□□□ 0.44
SRSF5-208ENST00000554929 PTPRGP23470 1445 aa17.77■□□□□ 0.44
SRSF5-208ENST00000554929 ABCC2Q92887 1545 aa17.74■□□□□ 0.43
SRSF5-208ENST00000554929 SAMD1Q6SPF0 538 aaPredicted RBP17.73■□□□□ 0.43
SRSF5-208ENST00000554929 TEX14Q8IWB6 1497 aa17.72■□□□□ 0.43
SRSF5-208ENST00000554929 DISP3Q9P2K9 1392 aa17.72■□□□□ 0.43
SRSF5-208ENST00000554929 MYCNP04198 464 aaPredicted RBP17.72■□□□□ 0.43
SRSF5-208ENST00000554929 KIAA0586Q9BVV6 1533 aa17.71■□□□□ 0.43
SRSF5-208ENST00000554929 APLP2Q06481 763 aa17.7■□□□□ 0.42
SRSF5-208ENST00000554929 BIVM-ERCC5R4GMW8 1640 aa17.69■□□□□ 0.42
SRSF5-208ENST00000554929 CUL7Q14999 1698 aa17.68■□□□□ 0.42
SRSF5-208ENST00000554929 MAP3K4Q9Y6R4 1608 aa17.68■□□□□ 0.42
SRSF5-208ENST00000554929 EPRSP07814 1512 aaKnown RBP17.67■□□□□ 0.42
SRSF5-208ENST00000554929 FOXD4L1Q9NU39 408 aa17.66■□□□□ 0.42
SRSF5-208ENST00000554929 TNIKQ9UKE5 1360 aa17.64■□□□□ 0.41
SRSF5-208ENST00000554929 ZNF219Q9P2Y4 722 aaPredicted RBP17.63■□□□□ 0.41
SRSF5-208ENST00000554929 ZBTB22O15209 634 aa17.6■□□□□ 0.41
SRSF5-208ENST00000554929 KIF21BO75037 1637 aa17.6■□□□□ 0.41
SRSF5-208ENST00000554929 CARMIL2Q6F5E8 1435 aa17.59■□□□□ 0.41
SRSF5-208ENST00000554929 UHRF1BP1LA0JNW5 1464 aa17.57■□□□□ 0.4
SRSF5-208ENST00000554929 PTPRMP28827 1452 aa17.57■□□□□ 0.4
SRSF5-208ENST00000554929 UACAQ9BZF9 1416 aa17.57■□□□□ 0.4
SRSF5-208ENST00000554929 CERKQ8TCT0 537 aa17.57■□□□□ 0.4
SRSF5-208ENST00000554929 SUPT5HO00267 1087 aaKnown RBP17.53■□□□□ 0.4
SRSF5-208ENST00000554929 ABCB7O75027 752 aa17.52■□□□□ 0.4
SRSF5-208ENST00000554929 PCF11O94913 1555 aaKnown RBP17.52■□□□□ 0.39
SRSF5-208ENST00000554929 KDM5BQ9UGL1 1544 aa17.52■□□□□ 0.39
SRSF5-208ENST00000554929 ZCCHC11Q5TAX3 1644 aaKnown RBP17.5■□□□□ 0.39
SRSF5-208ENST00000554929 CD109Q6YHK3 1445 aa17.49■□□□□ 0.39
SRSF5-208ENST00000554929 IGF1RP08069 1367 aa17.49■□□□□ 0.39
SRSF5-208ENST00000554929 HSPA2P54652 639 aa17.48■□□□□ 0.39
SRSF5-208ENST00000554929 KCNH8Q96L42 1107 aa17.48■□□□□ 0.39
SRSF5-208ENST00000554929 ADAMTSL3P82987 1691 aa17.47■□□□□ 0.39
SRSF5-208ENST00000554929 WDR7Q9Y4E6 1490 aa17.46■□□□□ 0.39
SRSF5-208ENST00000554929 MAGI3Q5TCQ9 1506 aa17.45■□□□□ 0.38
SRSF5-208ENST00000554929 ARID4BQ4LE39 1312 aaPredicted RBP17.42■□□□□ 0.38
SRSF5-208ENST00000554929 SPATA31D1Q6ZQQ2 1576 aa17.41■□□□□ 0.38
SRSF5-208ENST00000554929 ATF5Q9Y2D1 282 aaPredicted RBP17.41■□□□□ 0.38
SRSF5-208ENST00000554929 CFAP43Q8NDM7 1665 aa17.4■□□□□ 0.38
SRSF5-208ENST00000554929 IQGAP2Q13576 1575 aa17.4■□□□□ 0.38
SRSF5-208ENST00000554929 DISP1Q96F81 1524 aa17.39■□□□□ 0.37
SRSF5-208ENST00000554929 MADDQ8WXG6 1647 aa17.38■□□□□ 0.37
SRSF5-208ENST00000554929 CARMIL1Q5VZK9 1371 aa17.38■□□□□ 0.37
SRSF5-208ENST00000554929 KIF27Q86VH2 1401 aa17.37■□□□□ 0.37
SRSF5-208ENST00000554929 BCORL1Q5H9F3 1711 aa17.35■□□□□ 0.37
SRSF5-208ENST00000554929 ARAP3Q8WWN8 1544 aa17.34■□□□□ 0.37
SRSF5-208ENST00000554929 RAPGEF3O95398 923 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms