RNA–Protein interactions for RNA: ENST00000554761.5

EFCAB11-205, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2

Gene EFCAB11, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-205ENST00000554761 CUX1P39880 1505 aa11.55□□□□□ -0.56
EFCAB11-205ENST00000554761 WRNQ14191 1432 aaPredicted RBP eCLIP11.55□□□□□ -0.56
EFCAB11-205ENST00000554761 ABCA10Q8WWZ4 1543 aa11.53□□□□□ -0.56
EFCAB11-205ENST00000554761 SYNJ1O43426 1573 aa11.53□□□□□ -0.56
EFCAB11-205ENST00000554761 CLASP1Q7Z460 1538 aa11.49□□□□□ -0.57
EFCAB11-205ENST00000554761 FHAD1B1AJZ9 1412 aa11.45□□□□□ -0.58
EFCAB11-205ENST00000554761 CHD1O14646 1710 aa11.44□□□□□ -0.58
EFCAB11-205ENST00000554761 NUP160Q12769 1436 aa11.43□□□□□ -0.58
EFCAB11-205ENST00000554761 JPH4Q96JJ6 628 aa11.42□□□□□ -0.58
EFCAB11-205ENST00000554761 GRIN2AQ12879 1464 aa11.42□□□□□ -0.58
EFCAB11-205ENST00000554761 NPM1P06748 294 aaKnown RBP eCLIP11.39□□□□□ -0.59
EFCAB11-205ENST00000554761 ERICH3Q5RHP9 1530 aa11.37□□□□□ -0.59
EFCAB11-205ENST00000554761 ABCA5Q8WWZ7 1642 aa11.37□□□□□ -0.59
EFCAB11-205ENST00000554761 TOP2BQ02880 1626 aa11.35□□□□□ -0.59
EFCAB11-205ENST00000554761 PRG4Q92954 1404 aaPredicted RBP11.33□□□□□ -0.6
EFCAB11-205ENST00000554761 CACNB1Q02641 598 aaPredicted RBP11.31□□□□□ -0.6
EFCAB11-205ENST00000554761 RNF39Q9H2S5 420 aa11.31□□□□□ -0.6
EFCAB11-205ENST00000554761 ADAMTS12P58397 1594 aa11.31□□□□□ -0.6
EFCAB11-205ENST00000554761 IGF1RP08069 1367 aa11.3□□□□□ -0.6
EFCAB11-205ENST00000554761 KIF27Q86VH2 1401 aa11.3□□□□□ -0.6
EFCAB11-205ENST00000554761 CEP170Q5SW79 1584 aa11.29□□□□□ -0.6
EFCAB11-205ENST00000554761 PBRM1Q86U86 1689 aa11.29□□□□□ -0.6
EFCAB11-205ENST00000554761 BIVM-ERCC5R4GMW8 1640 aa11.28□□□□□ -0.6
EFCAB11-205ENST00000554761 FAM69CQ0P6D2 419 aa11.27□□□□□ -0.61
EFCAB11-205ENST00000554761 KIAA0586Q9BVV6 1533 aa11.25□□□□□ -0.61
EFCAB11-205ENST00000554761 CARMIL1Q5VZK9 1371 aa11.23□□□□□ -0.61
EFCAB11-205ENST00000554761 ERCC6L2Q5T890 1561 aa11.23□□□□□ -0.61
EFCAB11-205ENST00000554761 SHROOM2Q13796 1616 aa11.23□□□□□ -0.61
EFCAB11-205ENST00000554761 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.22□□□□□ -0.61
EFCAB11-205ENST00000554761 PTPRGP23470 1445 aa11.21□□□□□ -0.61
EFCAB11-205ENST00000554761 ABCC10Q5T3U5 1492 aa11.2□□□□□ -0.62
EFCAB11-205ENST00000554761 CARMIL2Q6F5E8 1435 aa11.2□□□□□ -0.62
EFCAB11-205ENST00000554761 TNIKQ9UKE5 1360 aa11.17□□□□□ -0.62
EFCAB11-205ENST00000554761 MAPKBP1O60336 1514 aa11.15□□□□□ -0.62
EFCAB11-205ENST00000554761 C1QBPQ07021 282 aaKnown RBP11.15□□□□□ -0.62
EFCAB11-205ENST00000554761 FAM9AQ8IZU1 332 aaPredicted RBP11.15□□□□□ -0.62
EFCAB11-205ENST00000554761 RUSC2Q8N2Y8 1516 aa11.13□□□□□ -0.63
EFCAB11-205ENST00000554761 PLB1Q6P1J6 1458 aa11.1□□□□□ -0.63
EFCAB11-205ENST00000554761 CUL7Q14999 1698 aa11.1□□□□□ -0.63
EFCAB11-205ENST00000554761 TTBK1Q5TCY1 1321 aaPredicted RBP11.09□□□□□ -0.63
EFCAB11-205ENST00000554761 UACAQ9BZF9 1416 aa11.09□□□□□ -0.63
EFCAB11-205ENST00000554761 RAPGEF2Q9Y4G8 1499 aa11.08□□□□□ -0.64
EFCAB11-205ENST00000554761 ABCC2Q92887 1545 aa11.08□□□□□ -0.64
EFCAB11-205ENST00000554761 UHRF1BP1LA0JNW5 1464 aa11.07□□□□□ -0.64
EFCAB11-205ENST00000554761 SLC4A2P04920 1241 aa11.05□□□□□ -0.64
EFCAB11-205ENST00000554761 ASXL2Q76L83 1435 aa11.05□□□□□ -0.64
EFCAB11-205ENST00000554761 ADCY10Q96PN6 1610 aa11.03□□□□□ -0.64
EFCAB11-205ENST00000554761 DIP2BQ9P265 1576 aa11.03□□□□□ -0.64
EFCAB11-205ENST00000554761 KDM4FA0A1W2PPD8 638 aa11.02□□□□□ -0.65
EFCAB11-205ENST00000554761 U3KPZ7 1027 aaPredicted RBP11.02□□□□□ -0.65
EFCAB11-205ENST00000554761 IQGAP2Q13576 1575 aa11.02□□□□□ -0.65
EFCAB11-205ENST00000554761 UGGT2Q9NYU1 1516 aa11□□□□□ -0.65
EFCAB11-205ENST00000554761 GOLGA3Q08378 1498 aa11□□□□□ -0.65
EFCAB11-205ENST00000554761 DISP1Q96F81 1524 aa10.99□□□□□ -0.65
EFCAB11-205ENST00000554761 KDM5BQ9UGL1 1544 aa10.99□□□□□ -0.65
EFCAB11-205ENST00000554761 TEX14Q8IWB6 1497 aa10.99□□□□□ -0.65
EFCAB11-205ENST00000554761 GLI2P10070 1586 aa10.99□□□□□ -0.65
EFCAB11-205ENST00000554761 KDM6BO15054 1643 aa10.97□□□□□ -0.65
EFCAB11-205ENST00000554761 EPRSP07814 1512 aaKnown RBP10.96□□□□□ -0.65
EFCAB11-205ENST00000554761 CSRNP3Q8WYN3 585 aa10.95□□□□□ -0.66
EFCAB11-205ENST00000554761 SLC4A1APQ9BWU0 796 aaKnown RBP10.95□□□□□ -0.66
EFCAB11-205ENST00000554761 KIF13AQ9H1H9 1805 aa10.95□□□□□ -0.66
EFCAB11-205ENST00000554761 KCNH8Q96L42 1107 aa10.94□□□□□ -0.66
EFCAB11-205ENST00000554761 PRXQ9BXM0 1461 aa10.93□□□□□ -0.66
EFCAB11-205ENST00000554761 WDR7Q9Y4E6 1490 aa10.93□□□□□ -0.66
EFCAB11-205ENST00000554761 CD109Q6YHK3 1445 aa10.92□□□□□ -0.66
EFCAB11-205ENST00000554761 PHLDB1Q86UU1 1377 aa10.92□□□□□ -0.66
EFCAB11-205ENST00000554761 MAGI3Q5TCQ9 1506 aa10.89□□□□□ -0.67
EFCAB11-205ENST00000554761 COL17A1Q9UMD9 1497 aaPredicted RBP10.88□□□□□ -0.67
EFCAB11-205ENST00000554761 KIAA0556O60303 1618 aa10.88□□□□□ -0.67
EFCAB11-205ENST00000554761 EEA1Q15075 1411 aa10.87□□□□□ -0.67
EFCAB11-205ENST00000554761 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.86□□□□□ -0.67
EFCAB11-205ENST00000554761 HNRNPUL2Q1KMD3 747 aaKnown RBP10.86□□□□□ -0.67
EFCAB11-205ENST00000554761 P3H3Q8IVL6 736 aa10.86□□□□□ -0.67
EFCAB11-205ENST00000554761 PLEKHD1A6NEE1 506 aa10.85□□□□□ -0.67
EFCAB11-205ENST00000554761 ADGRL1O94910 1474 aa10.83□□□□□ -0.68
EFCAB11-205ENST00000554761 ABCA8O94911 1581 aa10.82□□□□□ -0.68
EFCAB11-205ENST00000554761 ATP10BO94823 1461 aa10.82□□□□□ -0.68
EFCAB11-205ENST00000554761 MAP3K4Q9Y6R4 1608 aa10.81□□□□□ -0.68
EFCAB11-205ENST00000554761 SPINK5Q9NQ38 1064 aaPredicted RBP10.81□□□□□ -0.68
EFCAB11-205ENST00000554761 ZCCHC11Q5TAX3 1644 aaKnown RBP10.8□□□□□ -0.68
EFCAB11-205ENST00000554761 ARID3CA6NKF2 412 aa10.8□□□□□ -0.68
EFCAB11-205ENST00000554761 ARAP3Q8WWN8 1544 aa10.79□□□□□ -0.68
EFCAB11-205ENST00000554761 TSPOAP1O95153 1857 aa10.78□□□□□ -0.68
EFCAB11-205ENST00000554761 NEO1Q92859 1461 aa10.76□□□□□ -0.69
EFCAB11-205ENST00000554761 CAPN15O75808 1086 aa10.76□□□□□ -0.69
EFCAB11-205ENST00000554761 RAPGEF3O95398 923 aa10.76□□□□□ -0.69
EFCAB11-205ENST00000554761 CDK11AQ9UQ88 783 aaPredicted RBP10.76□□□□□ -0.69
EFCAB11-205ENST00000554761 PPRC1Q5VV67 1664 aaKnown RBP10.76□□□□□ -0.69
EFCAB11-205ENST00000554761 RANGAP1P46060 587 aaPredicted RBP10.75□□□□□ -0.69
EFCAB11-205ENST00000554761 ILDR1Q86SU0 546 aaPredicted RBP10.75□□□□□ -0.69
EFCAB11-205ENST00000554761 ARID4BQ4LE39 1312 aaPredicted RBP10.74□□□□□ -0.69
EFCAB11-205ENST00000554761 MYCNP04198 464 aaPredicted RBP10.73□□□□□ -0.69
EFCAB11-205ENST00000554761 UBTFP17480 764 aaKnown RBP10.73□□□□□ -0.69
EFCAB11-205ENST00000554761 CFAP43Q8NDM7 1665 aa10.73□□□□□ -0.69
EFCAB11-205ENST00000554761 FOXD4L1Q9NU39 408 aa10.72□□□□□ -0.69
EFCAB11-205ENST00000554761 SAMD1Q6SPF0 538 aaPredicted RBP10.71□□□□□ -0.69
EFCAB11-205ENST00000554761 CTTNBP2Q8WZ74 1663 aa10.7□□□□□ -0.7
EFCAB11-205ENST00000554761 APLP2Q06481 763 aa10.7□□□□□ -0.7
EFCAB11-205ENST00000554761 DENND4BO75064 1496 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms