RNA–Protein interactions for RNA: ENST00000554387.5

RGMA-205, Transcript of repulsive guidance molecule BMP co-receptor a, humanhuman

TSL 2

Gene RGMA, Length 3,172 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMA-205ENST00000554387 CCER2I3L3R5 266 aa19.31■□□□□ 0.68
RGMA-205ENST00000554387 TOP2BQ02880 1626 aa19.3■□□□□ 0.68
RGMA-205ENST00000554387 WDR97A6NE52 1622 aa19.3■□□□□ 0.68
RGMA-205ENST00000554387 SETD5Q9C0A6 1442 aa19.28■□□□□ 0.68
RGMA-205ENST00000554387 FAM50AQ14320 339 aaKnown RBP19.23■□□□□ 0.67
RGMA-205ENST00000554387 ARHGAP35Q9NRY4 1499 aa19.23■□□□□ 0.67
RGMA-205ENST00000554387 ERICH6Q7L0X2 663 aa19.22■□□□□ 0.67
RGMA-205ENST00000554387 TIMELESSQ9UNS1 1208 aa19.2■□□□□ 0.66
RGMA-205ENST00000554387 CDK11AQ9UQ88 783 aaPredicted RBP19.2■□□□□ 0.66
RGMA-205ENST00000554387 IRX6P78412 446 aaPredicted RBP19.18■□□□□ 0.66
RGMA-205ENST00000554387 KIF27Q86VH2 1401 aa19.18■□□□□ 0.66
RGMA-205ENST00000554387 FANCIQ9NVI1 1328 aa19.17■□□□□ 0.66
RGMA-205ENST00000554387 BIVM-ERCC5R4GMW8 1640 aa19.16■□□□□ 0.66
RGMA-205ENST00000554387 HNRNPUQ00839 825 aaKnown RBP eCLIP19.14■□□□□ 0.65
RGMA-205ENST00000554387 PHLDB1Q86UU1 1377 aa19.12■□□□□ 0.65
RGMA-205ENST00000554387 HMGXB3Q12766 1538 aa19.11■□□□□ 0.65
RGMA-205ENST00000554387 NCAPD3P42695 1498 aa19.09■□□□□ 0.65
RGMA-205ENST00000554387 ATP1B4Q9UN42 357 aaPredicted RBP19.07■□□□□ 0.64
RGMA-205ENST00000554387 TIAM1Q13009 1591 aa19.07■□□□□ 0.64
RGMA-205ENST00000554387 LRRC9Q6ZRR7 1453 aa19.06■□□□□ 0.64
RGMA-205ENST00000554387 CUX1P39880 1505 aa19.05■□□□□ 0.64
RGMA-205ENST00000554387 TONSLQ96HA7 1378 aa19.05■□□□□ 0.64
RGMA-205ENST00000554387 MAP3K1Q13233 1512 aa19.02■□□□□ 0.63
RGMA-205ENST00000554387 P3H3Q8IVL6 736 aa19■□□□□ 0.63
RGMA-205ENST00000554387 PPP4R2Q9NY27 417 aa18.97■□□□□ 0.63
RGMA-205ENST00000554387 MYT1LQ9UL68 1186 aa18.95■□□□□ 0.62
RGMA-205ENST00000554387 IGF1RP08069 1367 aa18.95■□□□□ 0.62
RGMA-205ENST00000554387 DEKP35659 375 aaKnown RBP18.95■□□□□ 0.62
RGMA-205ENST00000554387 ERICH6BQ5W0A0 696 aa18.94■□□□□ 0.62
RGMA-205ENST00000554387 CFTRP13569 1480 aa18.94■□□□□ 0.62
RGMA-205ENST00000554387 B4GALNT3Q6L9W6 998 aa18.91■□□□□ 0.62
RGMA-205ENST00000554387 FHAD1B1AJZ9 1412 aa18.91■□□□□ 0.62
RGMA-205ENST00000554387 CARMIL1Q5VZK9 1371 aa18.9■□□□□ 0.62
RGMA-205ENST00000554387 CCDC184Q52MB2 194 aa18.86■□□□□ 0.61
RGMA-205ENST00000554387 WASHC2AQ641Q2 1341 aa18.86■□□□□ 0.61
RGMA-205ENST00000554387 NBR1Q14596 966 aa18.84■□□□□ 0.61
RGMA-205ENST00000554387 FAM9BQ8IZU0 186 aa18.84■□□□□ 0.61
RGMA-205ENST00000554387 PRDM2Q13029 1718 aa18.84■□□□□ 0.61
RGMA-205ENST00000554387 HSPA5P11021 654 aaKnown RBP18.84■□□□□ 0.61
RGMA-205ENST00000554387 CCDC18Q5T9S5 1454 aa18.82■□□□□ 0.6
RGMA-205ENST00000554387 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.82■□□□□ 0.6
RGMA-205ENST00000554387 NOP58Q9Y2X3 529 aaKnown RBP18.82■□□□□ 0.6
RGMA-205ENST00000554387 UACAQ9BZF9 1416 aa18.81■□□□□ 0.6
RGMA-205ENST00000554387 PCF11O94913 1555 aaKnown RBP18.8■□□□□ 0.6
RGMA-205ENST00000554387 SLC24A1O60721 1099 aa18.79■□□□□ 0.6
RGMA-205ENST00000554387 FHOD3Q2V2M9 1422 aa18.78■□□□□ 0.6
RGMA-205ENST00000554387 PAK3O75914 559 aaPredicted RBP18.78■□□□□ 0.6
RGMA-205ENST00000554387 CC2D2AQ9P2K1 1620 aa18.77■□□□□ 0.6
RGMA-205ENST00000554387 MRS2Q9HD23 443 aa18.77■□□□□ 0.6
RGMA-205ENST00000554387 EIF4G2P78344 907 aaKnown RBP eCLIP18.77■□□□□ 0.59
RGMA-205ENST00000554387 CFAP43Q8NDM7 1665 aa18.77■□□□□ 0.59
RGMA-205ENST00000554387 FGD6Q6ZV73 1430 aa18.76■□□□□ 0.59
RGMA-205ENST00000554387 PTPRKQ15262 1439 aa18.75■□□□□ 0.59
RGMA-205ENST00000554387 HFM1A2PYH4 1435 aa18.75■□□□□ 0.59
RGMA-205ENST00000554387 PRKRIP1Q9H875 184 aaPredicted RBP18.74■□□□□ 0.59
RGMA-205ENST00000554387 ZBED9Q6R2W3 1325 aa18.73■□□□□ 0.59
RGMA-205ENST00000554387 AQRO60306 1485 aaKnown RBP eCLIP18.71■□□□□ 0.59
RGMA-205ENST00000554387 CNTLNQ9NXG0 1405 aa18.7■□□□□ 0.58
RGMA-205ENST00000554387 FYCO1Q9BQS8 1478 aa18.7■□□□□ 0.58
RGMA-205ENST00000554387 NAIPQ13075 1403 aa18.7■□□□□ 0.58
RGMA-205ENST00000554387 CASKIN1Q8WXD9 1431 aa18.7■□□□□ 0.58
RGMA-205ENST00000554387 KDM5BQ9UGL1 1544 aa18.7■□□□□ 0.58
RGMA-205ENST00000554387 MTUS2Q5JR59 1369 aa18.7■□□□□ 0.58
RGMA-205ENST00000554387 C11orf95C9JLR9 678 aaPredicted RBP18.69■□□□□ 0.58
RGMA-205ENST00000554387 FGD5Q6ZNL6 1462 aa18.69■□□□□ 0.58
RGMA-205ENST00000554387 CADPSQ9ULU8 1353 aa18.68■□□□□ 0.58
RGMA-205ENST00000554387 PTPN23Q9H3S7 1636 aa18.67■□□□□ 0.58
RGMA-205ENST00000554387 PRKCSHP14314 528 aaPredicted RBP18.67■□□□□ 0.58
RGMA-205ENST00000554387 RRP7BPQ9NSQ0 103 aa18.66■□□□□ 0.58
RGMA-205ENST00000554387 ANP32AP39687 249 aaKnown RBP18.66■□□□□ 0.58
RGMA-205ENST00000554387 FMN1Q68DA7 1419 aa18.65■□□□□ 0.58
RGMA-205ENST00000554387 NCOA2Q15596 1464 aa18.64■□□□□ 0.58
RGMA-205ENST00000554387 CHIC2Q9UKJ5 165 aa18.64■□□□□ 0.57
RGMA-205ENST00000554387 RTL5Q5HYW3 569 aaPredicted RBP18.64■□□□□ 0.57
RGMA-205ENST00000554387 CCDC136Q96JN2 1154 aa18.63■□□□□ 0.57
RGMA-205ENST00000554387 IPO9Q96P70 1041 aaKnown RBP18.63■□□□□ 0.57
RGMA-205ENST00000554387 CCDC7Q96M83 1385 aa18.63■□□□□ 0.57
RGMA-205ENST00000554387 L3MBTL2Q969R5 705 aa18.62■□□□□ 0.57
RGMA-205ENST00000554387 ZBTB47Q9UFB7 747 aaPredicted RBP18.62■□□□□ 0.57
RGMA-205ENST00000554387 CNGB1Q14028 1251 aaPredicted RBP18.61■□□□□ 0.57
RGMA-205ENST00000554387 AKNAQ7Z591 1439 aa18.59■□□□□ 0.57
RGMA-205ENST00000554387 NCOA1Q15788 1441 aa18.58■□□□□ 0.56
RGMA-205ENST00000554387 ANO8Q9HCE9 1232 aaPredicted RBP18.57■□□□□ 0.56
RGMA-205ENST00000554387 MYOM3Q5VTT5 1437 aa18.57■□□□□ 0.56
RGMA-205ENST00000554387 FOXD1Q16676 465 aa18.56■□□□□ 0.56
RGMA-205ENST00000554387 EFCAB5A4FU69 1503 aa18.56■□□□□ 0.56
RGMA-205ENST00000554387 MPHOSPH9Q99550 1183 aa18.54■□□□□ 0.56
RGMA-205ENST00000554387 SENP3-EIF4A1A0A087X0R7 540 aa18.54■□□□□ 0.56
RGMA-205ENST00000554387 NUDCQ9Y266 331 aa18.54■□□□□ 0.56
RGMA-205ENST00000554387 SMG6Q86US8 1419 aaKnown RBP18.53■□□□□ 0.56
RGMA-205ENST00000554387 KIF7Q2M1P5 1343 aa18.53■□□□□ 0.56
RGMA-205ENST00000554387 NBPF8Q3BBV2 869 aa18.52■□□□□ 0.55
RGMA-205ENST00000554387 DENND4BO75064 1496 aaPredicted RBP18.51■□□□□ 0.55
RGMA-205ENST00000554387 SNAPC4Q5SXM2 1469 aa18.5■□□□□ 0.55
RGMA-205ENST00000554387 FANCD2Q9BXW9 1451 aa18.49■□□□□ 0.55
RGMA-205ENST00000554387 RNF123Q5XPI4 1314 aa18.48■□□□□ 0.55
RGMA-205ENST00000554387 POLR3GLQ9BT43 218 aa18.48■□□□□ 0.55
RGMA-205ENST00000554387 NPM2Q86SE8 214 aaKnown RBP18.48■□□□□ 0.55
RGMA-205ENST00000554387 IL27Q8NEV9 243 aa18.47■□□□□ 0.55
RGMA-205ENST00000554387 SALL2Q9Y467 1007 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms