RNA–Protein interactions for RNA: ENST00000554387.5

RGMA-205, Transcript of repulsive guidance molecule BMP co-receptor a, humanhuman

TSL 2

Gene RGMA, Length 3,172 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMA-205ENST00000554387 NISCHQ9Y2I1 1504 aa26.3■■□□□ 1.8
RGMA-205ENST00000554387 SHROOM4Q9ULL8 1493 aa23.25■■□□□ 1.31
RGMA-205ENST00000554387 SUPT5HO00267 1087 aaKnown RBP23.15■■□□□ 1.3
RGMA-205ENST00000554387 HRCP23327 699 aa23.08■■□□□ 1.29
RGMA-205ENST00000554387 PCGF6Q9BYE7 350 aa22.76■■□□□ 1.23
RGMA-205ENST00000554387 MYO15BQ96JP2 1530 aa22.69■■□□□ 1.22
RGMA-205ENST00000554387 CHIC1Q5VXU3 224 aa22.67■■□□□ 1.22
RGMA-205ENST00000554387 PPARGC1BQ86YN6 1023 aaKnown RBP22.64■■□□□ 1.21
RGMA-205ENST00000554387 CCDC180Q9P1Z9 1646 aa22.37■■□□□ 1.17
RGMA-205ENST00000554387 ZCCHC6Q5VYS8 1495 aaKnown RBP22.33■■□□□ 1.16
RGMA-205ENST00000554387 DCAF1Q9Y4B6 1507 aa22.17■■□□□ 1.14
RGMA-205ENST00000554387 LOC105371045A0A1W2PR82 267 aa22.16■■□□□ 1.14
RGMA-205ENST00000554387 DCAF8L2P0C7V8 631 aa22.1■■□□□ 1.13
RGMA-205ENST00000554387 TRIM26Q12899 539 aaPredicted RBP22.05■■□□□ 1.12
RGMA-205ENST00000554387 PELP1Q8IZL8 1130 aaKnown RBP21.97■■□□□ 1.11
RGMA-205ENST00000554387 ZEB1P37275 1124 aaPredicted RBP21.81■■□□□ 1.08
RGMA-205ENST00000554387 SCAF1Q9H7N4 1312 aaKnown RBP21.73■■□□□ 1.07
RGMA-205ENST00000554387 TRIM41Q8WV44 630 aa21.42■■□□□ 1.02
RGMA-205ENST00000554387 FAM9AQ8IZU1 332 aaPredicted RBP21.42■■□□□ 1.02
RGMA-205ENST00000554387 EHMT2Q96KQ7 1210 aa21.34■■□□□ 1.01
RGMA-205ENST00000554387 ACIN1Q9UKV3 1341 aaKnown RBP21.27■■□□□ 1
RGMA-205ENST00000554387 NEUROD1Q13562 356 aa21.23■□□□□ 0.99
RGMA-205ENST00000554387 RSF1Q96T23 1441 aaPredicted RBP21.15■□□□□ 0.98
RGMA-205ENST00000554387 ABCC9O60706 1549 aa21.15■□□□□ 0.98
RGMA-205ENST00000554387 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.15■□□□□ 0.98
RGMA-205ENST00000554387 CCER1Q8TC90 406 aaPredicted RBP21.12■□□□□ 0.97
RGMA-205ENST00000554387 GTF3C3Q9Y5Q9 886 aa21.11■□□□□ 0.97
RGMA-205ENST00000554387 CENPBP07199 599 aaPredicted RBP21.05■□□□□ 0.96
RGMA-205ENST00000554387 MYT1Q01538 1121 aa21.05■□□□□ 0.96
RGMA-205ENST00000554387 DIEXFQ68CQ4 756 aaKnown RBP21.04■□□□□ 0.96
RGMA-205ENST00000554387 RB1CC1Q8TDY2 1594 aa20.98■□□□□ 0.95
RGMA-205ENST00000554387 SCRIBQ14160 1630 aa20.85■□□□□ 0.93
RGMA-205ENST00000554387 TTBK1Q5TCY1 1321 aaPredicted RBP20.79■□□□□ 0.92
RGMA-205ENST00000554387 YTHDC1Q96MU7 727 aaKnown RBP20.7■□□□□ 0.9
RGMA-205ENST00000554387 ZNF316A6NFI3 1004 aaPredicted RBP20.67■□□□□ 0.9
RGMA-205ENST00000554387 NACADO15069 1562 aa20.64■□□□□ 0.89
RGMA-205ENST00000554387 CECR2Q9BXF3 1484 aa20.61■□□□□ 0.89
RGMA-205ENST00000554387 MROH2BQ7Z745 1585 aa20.55■□□□□ 0.88
RGMA-205ENST00000554387 WRNQ14191 1432 aaPredicted RBP eCLIP20.51■□□□□ 0.87
RGMA-205ENST00000554387 MIER1Q8N108 512 aa20.51■□□□□ 0.87
RGMA-205ENST00000554387 CEP162Q5TB80 1403 aa20.46■□□□□ 0.87
RGMA-205ENST00000554387 WIZO95785 1651 aa20.43■□□□□ 0.86
RGMA-205ENST00000554387 UBTFP17480 764 aaKnown RBP20.36■□□□□ 0.85
RGMA-205ENST00000554387 CCDC88BA6NC98 1476 aa20.35■□□□□ 0.85
RGMA-205ENST00000554387 TNIKQ9UKE5 1360 aa20.35■□□□□ 0.85
RGMA-205ENST00000554387 HNRNPUL2Q1KMD3 747 aaKnown RBP20.33■□□□□ 0.84
RGMA-205ENST00000554387 ABCC8Q09428 1581 aa20.3■□□□□ 0.84
RGMA-205ENST00000554387 SOGA1O94964 1423 aa20.29■□□□□ 0.84
RGMA-205ENST00000554387 EIF4G1Q04637 1599 aaKnown RBP20.29■□□□□ 0.84
RGMA-205ENST00000554387 CSRNP3Q8WYN3 585 aa20.27■□□□□ 0.84
RGMA-205ENST00000554387 BAZ1AQ9NRL2 1556 aaPredicted RBP20.26■□□□□ 0.83
RGMA-205ENST00000554387 RUSC2Q8N2Y8 1516 aa20.15■□□□□ 0.82
RGMA-205ENST00000554387 EEA1Q15075 1411 aa20.12■□□□□ 0.81
RGMA-205ENST00000554387 SUPT16HQ9Y5B9 1047 aaKnown RBP20.12■□□□□ 0.81
RGMA-205ENST00000554387 GOLGA3Q08378 1498 aa20.09■□□□□ 0.81
RGMA-205ENST00000554387 PABPN1Q86U42 306 aaKnown RBP eCLIP20.08■□□□□ 0.8
RGMA-205ENST00000554387 CLSPNQ9HAW4 1339 aa20.06■□□□□ 0.8
RGMA-205ENST00000554387 TOP2AP11388 1531 aaKnown RBP20.04■□□□□ 0.8
RGMA-205ENST00000554387 APLP2Q06481 763 aa20.03■□□□□ 0.8
RGMA-205ENST00000554387 UNC13AQ9UPW8 1703 aa19.99■□□□□ 0.79
RGMA-205ENST00000554387 SMARCA4P51532 1647 aa19.99■□□□□ 0.79
RGMA-205ENST00000554387 SMARCA2P51531 1590 aa19.98■□□□□ 0.79
RGMA-205ENST00000554387 TSHZ2Q9NRE2 1034 aa19.97■□□□□ 0.79
RGMA-205ENST00000554387 CLIP1P30622 1438 aa19.96■□□□□ 0.79
RGMA-205ENST00000554387 RANGAP1P46060 587 aaPredicted RBP19.93■□□□□ 0.78
RGMA-205ENST00000554387 ANP32EQ9BTT0 268 aa19.93■□□□□ 0.78
RGMA-205ENST00000554387 VPS8Q8N3P4 1428 aa19.9■□□□□ 0.78
RGMA-205ENST00000554387 CEP164Q9UPV0 1460 aa19.89■□□□□ 0.78
RGMA-205ENST00000554387 DHX57Q6P158 1386 aaKnown RBP19.84■□□□□ 0.77
RGMA-205ENST00000554387 BCANQ96GW7 911 aa19.76■□□□□ 0.75
RGMA-205ENST00000554387 KIF21BO75037 1637 aa19.76■□□□□ 0.75
RGMA-205ENST00000554387 KCNH8Q96L42 1107 aa19.75■□□□□ 0.75
RGMA-205ENST00000554387 BCL11AQ9H165 835 aa19.74■□□□□ 0.75
RGMA-205ENST00000554387 BICRAQ9NZM4 1560 aa19.74■□□□□ 0.75
RGMA-205ENST00000554387 RAPGEF2Q9Y4G8 1499 aa19.72■□□□□ 0.75
RGMA-205ENST00000554387 BAZ1BQ9UIG0 1483 aaKnown RBP19.68■□□□□ 0.74
RGMA-205ENST00000554387 PEG3Q9GZU2 1588 aa19.67■□□□□ 0.74
RGMA-205ENST00000554387 FKBP8Q14318 412 aa19.67■□□□□ 0.74
RGMA-205ENST00000554387 SYNJ1O43426 1573 aa19.66■□□□□ 0.74
RGMA-205ENST00000554387 KANK4Q5T7N3 995 aaPredicted RBP19.66■□□□□ 0.74
RGMA-205ENST00000554387 ITGAEP38570 1179 aa19.59■□□□□ 0.73
RGMA-205ENST00000554387 RBM19Q9Y4C8 960 aaKnown RBP19.54■□□□□ 0.72
RGMA-205ENST00000554387 DDX10Q13206 875 aaKnown RBP19.54■□□□□ 0.72
RGMA-205ENST00000554387 DNAJC5BQ9UF47 199 aa19.53■□□□□ 0.72
RGMA-205ENST00000554387 NEFLP07196 543 aa19.52■□□□□ 0.72
RGMA-205ENST00000554387 RRBP1Q9P2E9 1410 aaKnown RBP19.5■□□□□ 0.71
RGMA-205ENST00000554387 ARAP1Q96P48 1450 aa19.48■□□□□ 0.71
RGMA-205ENST00000554387 CCNB3Q8WWL7 1395 aa19.47■□□□□ 0.71
RGMA-205ENST00000554387 ATAD2BQ9ULI0 1458 aa19.45■□□□□ 0.7
RGMA-205ENST00000554387 CUX2O14529 1486 aa19.44■□□□□ 0.7
RGMA-205ENST00000554387 TRIM52Q96A61 297 aa19.44■□□□□ 0.7
RGMA-205ENST00000554387 RAB3GAP2Q9H2M9 1393 aa19.42■□□□□ 0.7
RGMA-205ENST00000554387 SIN3AQ96ST3 1273 aa19.38■□□□□ 0.69
RGMA-205ENST00000554387 PRXQ9BXM0 1461 aa19.37■□□□□ 0.69
RGMA-205ENST00000554387 HIRIP3Q9BW71 556 aaPredicted RBP19.37■□□□□ 0.69
RGMA-205ENST00000554387 PPP1R15AO75807 674 aaPredicted RBP19.36■□□□□ 0.69
RGMA-205ENST00000554387 MAPKBP1O60336 1514 aa19.35■□□□□ 0.69
RGMA-205ENST00000554387 ERICH3Q5RHP9 1530 aa19.34■□□□□ 0.69
RGMA-205ENST00000554387 ANP32CO43423 234 aa19.33■□□□□ 0.69
RGMA-205ENST00000554387 MSH5O43196 834 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms