RNA–Protein interactions for RNA: ENST00000554347.1

CASC1-206, Transcript of cancer susceptibility 1, humanhuman

TSL 4

Gene CASC1, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-206ENST00000554347 CEP164Q9UPV0 1460 aa11.64□□□□□ -0.55
CASC1-206ENST00000554347 ZNF692Q9BU19 519 aaPredicted RBP11.64□□□□□ -0.55
CASC1-206ENST00000554347 FANCD2Q9BXW9 1451 aa11.63□□□□□ -0.55
CASC1-206ENST00000554347 CUX2O14529 1486 aa11.6□□□□□ -0.55
CASC1-206ENST00000554347 MRC2Q9UBG0 1479 aa11.59□□□□□ -0.55
CASC1-206ENST00000554347 OSCARQ8IYS5 282 aa11.59□□□□□ -0.55
CASC1-206ENST00000554347 STAG3Q9UJ98 1225 aa11.59□□□□□ -0.55
CASC1-206ENST00000554347 THOC2Q8NI27 1593 aaKnown RBP11.58□□□□□ -0.55
CASC1-206ENST00000554347 SSUH2Q9Y2M2 353 aa11.58□□□□□ -0.56
CASC1-206ENST00000554347 IFNLR1Q8IU57 520 aaPredicted RBP11.55□□□□□ -0.56
CASC1-206ENST00000554347 CACNB1Q02641 598 aaPredicted RBP11.54□□□□□ -0.56
CASC1-206ENST00000554347 WDR62O43379 1518 aa11.51□□□□□ -0.57
CASC1-206ENST00000554347 ABCC8Q09428 1581 aa11.48□□□□□ -0.57
CASC1-206ENST00000554347 URB2Q14146 1524 aaKnown RBP11.47□□□□□ -0.57
CASC1-206ENST00000554347 DNMBPQ6XZF7 1577 aa11.45□□□□□ -0.58
CASC1-206ENST00000554347 KLHL34Q8N239 644 aa11.44□□□□□ -0.58
CASC1-206ENST00000554347 SPOCK2Q92563 424 aa11.44□□□□□ -0.58
CASC1-206ENST00000554347 PLCD3Q8N3E9 789 aa11.43□□□□□ -0.58
CASC1-206ENST00000554347 TOPBP1Q92547 1522 aa11.43□□□□□ -0.58
CASC1-206ENST00000554347 PLEKHG5O94827 1062 aa11.41□□□□□ -0.58
CASC1-206ENST00000554347 ZBTB47Q9UFB7 747 aaPredicted RBP11.38□□□□□ -0.59
CASC1-206ENST00000554347 IFT140Q96RY7 1462 aa11.38□□□□□ -0.59
CASC1-206ENST00000554347 PKD2Q13563 968 aa11.35□□□□□ -0.59
CASC1-206ENST00000554347 MIER1Q8N108 512 aa11.35□□□□□ -0.59
CASC1-206ENST00000554347 CUX1P39880 1505 aa11.35□□□□□ -0.59
CASC1-206ENST00000554347 WRNQ14191 1432 aaPredicted RBP eCLIP11.35□□□□□ -0.59
CASC1-206ENST00000554347 POLA1P09884 1462 aaPredicted RBP11.33□□□□□ -0.6
CASC1-206ENST00000554347 FGD5Q6ZNL6 1462 aa11.33□□□□□ -0.6
CASC1-206ENST00000554347 SOGA1O94964 1423 aa11.33□□□□□ -0.6
CASC1-206ENST00000554347 RBM42Q9BTD8 480 aaKnown RBP11.32□□□□□ -0.6
CASC1-206ENST00000554347 RAD54L2Q9Y4B4 1467 aa11.3□□□□□ -0.6
CASC1-206ENST00000554347 TOP2BQ02880 1626 aa11.28□□□□□ -0.6
CASC1-206ENST00000554347 BIVM-ERCC5R4GMW8 1640 aa11.28□□□□□ -0.6
CASC1-206ENST00000554347 PLCB2Q00722 1185 aa11.28□□□□□ -0.6
CASC1-206ENST00000554347 ZNF608Q9ULD9 1512 aaPredicted RBP11.28□□□□□ -0.6
CASC1-206ENST00000554347 SYNJ1O43426 1573 aa11.28□□□□□ -0.6
CASC1-206ENST00000554347 EIF4G3O43432 1585 aaKnown RBP11.28□□□□□ -0.6
CASC1-206ENST00000554347 TARBP1Q13395 1621 aaKnown RBP11.27□□□□□ -0.6
CASC1-206ENST00000554347 ECM2O94769 699 aaPredicted RBP11.26□□□□□ -0.61
CASC1-206ENST00000554347 TDRD9Q8NDG6 1382 aaKnown RBP11.25□□□□□ -0.61
CASC1-206ENST00000554347 AQRO60306 1485 aaKnown RBP eCLIP11.25□□□□□ -0.61
CASC1-206ENST00000554347 WDR97A6NE52 1622 aa11.23□□□□□ -0.61
CASC1-206ENST00000554347 SPDYE1Q8NFV5 336 aaPredicted RBP11.22□□□□□ -0.61
CASC1-206ENST00000554347 AKT1S1Q96B36 256 aa11.22□□□□□ -0.61
CASC1-206ENST00000554347 ABCA10Q8WWZ4 1543 aa11.2□□□□□ -0.62
CASC1-206ENST00000554347 TRIM41Q8WV44 630 aa11.2□□□□□ -0.62
CASC1-206ENST00000554347 GAPVD1Q14C86 1478 aa11.19□□□□□ -0.62
CASC1-206ENST00000554347 PBRM1Q86U86 1689 aa11.19□□□□□ -0.62
CASC1-206ENST00000554347 GRIN2BQ13224 1484 aa11.19□□□□□ -0.62
CASC1-206ENST00000554347 CHMP7Q8WUX9 453 aaPredicted RBP11.17□□□□□ -0.62
CASC1-206ENST00000554347 SNAPC4Q5SXM2 1469 aa11.17□□□□□ -0.62
CASC1-206ENST00000554347 DNAJC5Q9H3Z4 198 aa11.16□□□□□ -0.62
CASC1-206ENST00000554347 CHD1O14646 1710 aa11.15□□□□□ -0.62
CASC1-206ENST00000554347 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.15□□□□□ -0.62
CASC1-206ENST00000554347 ABCA5Q8WWZ7 1642 aa11.15□□□□□ -0.62
CASC1-206ENST00000554347 MAGI1Q96QZ7 1491 aaPredicted RBP11.14□□□□□ -0.63
CASC1-206ENST00000554347 CIZ1Q9ULV3 898 aaPredicted RBP11.14□□□□□ -0.63
CASC1-206ENST00000554347 KIF27Q86VH2 1401 aa11.12□□□□□ -0.63
CASC1-206ENST00000554347 BBXQ8WY36 941 aaPredicted RBP11.12□□□□□ -0.63
CASC1-206ENST00000554347 GSE1Q14687 1217 aa11.1□□□□□ -0.63
CASC1-206ENST00000554347 SYNJ2O15056 1496 aa11.1□□□□□ -0.63
CASC1-206ENST00000554347 HAP1P54257 671 aaPredicted RBP11.09□□□□□ -0.63
CASC1-206ENST00000554347 ERICH3Q5RHP9 1530 aa11.09□□□□□ -0.63
CASC1-206ENST00000554347 RGL2O15211 777 aa11.07□□□□□ -0.64
CASC1-206ENST00000554347 PRR29P0C7W0 189 aa11.06□□□□□ -0.64
CASC1-206ENST00000554347 CLEC11AQ9Y240 323 aa11.06□□□□□ -0.64
CASC1-206ENST00000554347 FHAD1B1AJZ9 1412 aa11.06□□□□□ -0.64
CASC1-206ENST00000554347 ADAMTS12P58397 1594 aa11.06□□□□□ -0.64
CASC1-206ENST00000554347 REM2Q8IYK8 340 aaPredicted RBP11.04□□□□□ -0.64
CASC1-206ENST00000554347 CUL7Q14999 1698 aa11.04□□□□□ -0.64
CASC1-206ENST00000554347 GRIN2AQ12879 1464 aa11.03□□□□□ -0.64
CASC1-206ENST00000554347 TAOK2Q9UL54 1235 aa11.02□□□□□ -0.65
CASC1-206ENST00000554347 NUBP1P53384 320 aa10.99□□□□□ -0.65
CASC1-206ENST00000554347 VSIG10Q8N0Z9 540 aa10.99□□□□□ -0.65
CASC1-206ENST00000554347 FAM212AQ96EL1 285 aa10.99□□□□□ -0.65
CASC1-206ENST00000554347 IGF1RP08069 1367 aa10.99□□□□□ -0.65
CASC1-206ENST00000554347 CARMIL1Q5VZK9 1371 aa10.99□□□□□ -0.65
CASC1-206ENST00000554347 FAM9AQ8IZU1 332 aaPredicted RBP10.97□□□□□ -0.65
CASC1-206ENST00000554347 CREBZFQ9NS37 354 aa10.97□□□□□ -0.65
CASC1-206ENST00000554347 NPM1P06748 294 aaKnown RBP eCLIP10.96□□□□□ -0.65
CASC1-206ENST00000554347 RIMBP3CA6NJZ7 1639 aa10.95□□□□□ -0.66
CASC1-206ENST00000554347 RIMBP3BA6NNM3 1639 aa10.95□□□□□ -0.66
CASC1-206ENST00000554347 RIMBP3Q9UFD9 1639 aa10.95□□□□□ -0.66
CASC1-206ENST00000554347 CEP170Q5SW79 1584 aa10.95□□□□□ -0.66
CASC1-206ENST00000554347 ARHGEF11O15085 1522 aa10.95□□□□□ -0.66
CASC1-206ENST00000554347 RUSC2Q8N2Y8 1516 aa10.95□□□□□ -0.66
CASC1-206ENST00000554347 CHGAP10645 457 aaKnown RBP10.95□□□□□ -0.66
CASC1-206ENST00000554347 PAXIP1Q6ZW49 1069 aaPredicted RBP10.95□□□□□ -0.66
CASC1-206ENST00000554347 CLASP1Q7Z460 1538 aa10.94□□□□□ -0.66
CASC1-206ENST00000554347 DCAF8Q5TAQ9 597 aa10.94□□□□□ -0.66
CASC1-206ENST00000554347 SPRYD3Q8NCJ5 442 aa10.94□□□□□ -0.66
CASC1-206ENST00000554347 RAPGEF2Q9Y4G8 1499 aa10.93□□□□□ -0.66
CASC1-206ENST00000554347 EEA1Q15075 1411 aa10.93□□□□□ -0.66
CASC1-206ENST00000554347 NUP160Q12769 1436 aa10.92□□□□□ -0.66
CASC1-206ENST00000554347 HS6ST3Q8IZP7 471 aa10.92□□□□□ -0.66
CASC1-206ENST00000554347 CFAP44Q96MT7 982 aa10.92□□□□□ -0.66
CASC1-206ENST00000554347 CYB5RLQ6IPT4 315 aa10.91□□□□□ -0.66
CASC1-206ENST00000554347 PITPNM1O00562 1244 aa10.9□□□□□ -0.66
CASC1-206ENST00000554347 MNX1P50219 401 aaPredicted RBP10.9□□□□□ -0.66
CASC1-206ENST00000554347 RIOK3O14730 519 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms