RNA–Protein interactions for RNA: ENST00000554174.1

LRP1-207, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-207ENST00000554174 FHOD3Q2V2M9 1422 aa18.19■□□□□ 0.5
LRP1-207ENST00000554174 ABCA5Q8WWZ7 1642 aa18.19■□□□□ 0.5
LRP1-207ENST00000554174 PCF11O94913 1555 aaKnown RBP18.18■□□□□ 0.5
LRP1-207ENST00000554174 DHX57Q6P158 1386 aaKnown RBP18.18■□□□□ 0.5
LRP1-207ENST00000554174 ZNF316A6NFI3 1004 aaPredicted RBP18.17■□□□□ 0.5
LRP1-207ENST00000554174 LRRC9Q6ZRR7 1453 aa18.17■□□□□ 0.5
LRP1-207ENST00000554174 CTTNBP2Q8WZ74 1663 aa18.17■□□□□ 0.5
LRP1-207ENST00000554174 FHAD1B1AJZ9 1412 aa18.17■□□□□ 0.5
LRP1-207ENST00000554174 GAPVD1Q14C86 1478 aa18.15■□□□□ 0.5
LRP1-207ENST00000554174 ITGAEP38570 1179 aa18.14■□□□□ 0.49
LRP1-207ENST00000554174 ATP1B4Q9UN42 357 aaPredicted RBP18.13■□□□□ 0.49
LRP1-207ENST00000554174 EFCAB5A4FU69 1503 aa18.12■□□□□ 0.49
LRP1-207ENST00000554174 PHLDB1Q86UU1 1377 aa18.12■□□□□ 0.49
LRP1-207ENST00000554174 CFAP43Q8NDM7 1665 aa18.12■□□□□ 0.49
LRP1-207ENST00000554174 TARBP1Q13395 1621 aaKnown RBP18.1■□□□□ 0.49
LRP1-207ENST00000554174 FYCO1Q9BQS8 1478 aa18.07■□□□□ 0.48
LRP1-207ENST00000554174 CLSPNQ9HAW4 1339 aa18.07■□□□□ 0.48
LRP1-207ENST00000554174 CASKIN1Q8WXD9 1431 aa18.07■□□□□ 0.48
LRP1-207ENST00000554174 AQRO60306 1485 aaKnown RBP eCLIP18.04■□□□□ 0.485e-7■■■■□ 22.4
LRP1-207ENST00000554174 SNAPC4Q5SXM2 1469 aa18.02■□□□□ 0.48
LRP1-207ENST00000554174 SAMD9Q5K651 1589 aa18.02■□□□□ 0.48
LRP1-207ENST00000554174 RAB3GAP2Q9H2M9 1393 aa18.01■□□□□ 0.47
LRP1-207ENST00000554174 FMN1Q68DA7 1419 aa18.01■□□□□ 0.47
LRP1-207ENST00000554174 FAM50AQ14320 339 aaKnown RBP18■□□□□ 0.47
LRP1-207ENST00000554174 SCAF1Q9H7N4 1312 aaKnown RBP18■□□□□ 0.47
LRP1-207ENST00000554174 MRC2Q9UBG0 1479 aa17.98■□□□□ 0.47
LRP1-207ENST00000554174 PBRM1Q86U86 1689 aa17.98■□□□□ 0.47
LRP1-207ENST00000554174 LRRIQ1Q96JM4 1722 aa17.97■□□□□ 0.47
LRP1-207ENST00000554174 SETD5Q9C0A6 1442 aa17.94■□□□□ 0.46
LRP1-207ENST00000554174 NEUROD1Q13562 356 aa17.93■□□□□ 0.46
LRP1-207ENST00000554174 MAPKBP1O60336 1514 aa17.92■□□□□ 0.46
LRP1-207ENST00000554174 GRIN2BQ13224 1484 aa17.92■□□□□ 0.46
LRP1-207ENST00000554174 MIER1Q8N108 512 aa17.91■□□□□ 0.46
LRP1-207ENST00000554174 ACIN1Q9UKV3 1341 aaKnown RBP17.9■□□□□ 0.46
LRP1-207ENST00000554174 ADAMTS12P58397 1594 aa17.9■□□□□ 0.46
LRP1-207ENST00000554174 ZNF608Q9ULD9 1512 aaPredicted RBP17.89■□□□□ 0.46
LRP1-207ENST00000554174 MTUS2Q5JR59 1369 aa17.89■□□□□ 0.45
LRP1-207ENST00000554174 FGD6Q6ZV73 1430 aa17.87■□□□□ 0.45
LRP1-207ENST00000554174 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.86■□□□□ 0.45
LRP1-207ENST00000554174 IQGAP2Q13576 1575 aa17.85■□□□□ 0.45
LRP1-207ENST00000554174 WDR62O43379 1518 aa17.85■□□□□ 0.45
LRP1-207ENST00000554174 THOC2Q8NI27 1593 aaKnown RBP17.83■□□□□ 0.45
LRP1-207ENST00000554174 IFT140Q96RY7 1462 aa17.83■□□□□ 0.45
LRP1-207ENST00000554174 NCOA2Q15596 1464 aa17.83■□□□□ 0.44
LRP1-207ENST00000554174 MAGI3Q5TCQ9 1506 aa17.83■□□□□ 0.44
LRP1-207ENST00000554174 PTPRKQ15262 1439 aa17.8■□□□□ 0.44
LRP1-207ENST00000554174 CENPBP07199 599 aaPredicted RBP17.8■□□□□ 0.44
LRP1-207ENST00000554174 SIN3AQ96ST3 1273 aa17.79■□□□□ 0.44
LRP1-207ENST00000554174 SUPT6HQ7KZ85 1726 aaKnown RBP17.78■□□□□ 0.44
LRP1-207ENST00000554174 EHBP1L1Q8N3D4 1523 aa17.78■□□□□ 0.44
LRP1-207ENST00000554174 MYOM3Q5VTT5 1437 aa17.78■□□□□ 0.44
LRP1-207ENST00000554174 YTHDC1Q96MU7 727 aaKnown RBP17.77■□□□□ 0.44
LRP1-207ENST00000554174 UGGT2Q9NYU1 1516 aa17.75■□□□□ 0.43
LRP1-207ENST00000554174 CCDC18Q5T9S5 1454 aa17.75■□□□□ 0.43
LRP1-207ENST00000554174 ARHGEF11O15085 1522 aa17.75■□□□□ 0.43
LRP1-207ENST00000554174 HECW1Q76N89 1606 aa17.74■□□□□ 0.43
LRP1-207ENST00000554174 EIF4G3O43432 1585 aaKnown RBP17.74■□□□□ 0.43
LRP1-207ENST00000554174 EPRSP07814 1512 aaKnown RBP17.74■□□□□ 0.43
LRP1-207ENST00000554174 ARID3CA6NKF2 412 aa17.73■□□□□ 0.43
LRP1-207ENST00000554174 CDK13Q14004 1512 aaKnown RBP17.73■□□□□ 0.43
LRP1-207ENST00000554174 ERCC6Q03468 1493 aa17.73■□□□□ 0.43
LRP1-207ENST00000554174 PTPN23Q9H3S7 1636 aa17.71■□□□□ 0.43
LRP1-207ENST00000554174 HFM1A2PYH4 1435 aa17.71■□□□□ 0.43
LRP1-207ENST00000554174 KIAA0586Q9BVV6 1533 aa17.7■□□□□ 0.42
LRP1-207ENST00000554174 GRIN2AQ12879 1464 aa17.69■□□□□ 0.42
LRP1-207ENST00000554174 DISP1Q96F81 1524 aa17.69■□□□□ 0.42
LRP1-207ENST00000554174 GTF3C3Q9Y5Q9 886 aa17.69■□□□□ 0.42
LRP1-207ENST00000554174 NAIPQ13075 1403 aa17.68■□□□□ 0.42
LRP1-207ENST00000554174 KIAA0556O60303 1618 aa17.67■□□□□ 0.42
LRP1-207ENST00000554174 TCOF1Q13428 1488 aaKnown RBP17.63■□□□□ 0.41
LRP1-207ENST00000554174 UACAQ9BZF9 1416 aa17.63■□□□□ 0.41
LRP1-207ENST00000554174 CHIC2Q9UKJ5 165 aa17.62■□□□□ 0.41
LRP1-207ENST00000554174 RRP7BPQ9NSQ0 103 aa17.6■□□□□ 0.41
LRP1-207ENST00000554174 NUP153P49790 1475 aaKnown RBP17.6■□□□□ 0.41
LRP1-207ENST00000554174 MAGI1Q96QZ7 1491 aaPredicted RBP17.6■□□□□ 0.41
LRP1-207ENST00000554174 CEP170Q5SW79 1584 aa17.6■□□□□ 0.41
LRP1-207ENST00000554174 CHMP7Q8WUX9 453 aaPredicted RBP17.59■□□□□ 0.41
LRP1-207ENST00000554174 TIMELESSQ9UNS1 1208 aa17.59■□□□□ 0.41
LRP1-207ENST00000554174 PPP1R15AO75807 674 aaPredicted RBP17.59■□□□□ 0.41
LRP1-207ENST00000554174 FBLN2P98095 1184 aa17.58■□□□□ 0.4
LRP1-207ENST00000554174 SYNJ2O15056 1496 aa17.58■□□□□ 0.4
LRP1-207ENST00000554174 RAPGEF6Q8TEU7 1601 aa17.57■□□□□ 0.4
LRP1-207ENST00000554174 MIA2Q96PC5 1412 aa17.57■□□□□ 0.4
LRP1-207ENST00000554174 KDM6BO15054 1643 aa17.55■□□□□ 0.4
LRP1-207ENST00000554174 GCC2Q8IWJ2 1684 aa17.54■□□□□ 0.4
LRP1-207ENST00000554174 HIRIP3Q9BW71 556 aaPredicted RBP17.52■□□□□ 0.4
LRP1-207ENST00000554174 DENND4BO75064 1496 aaPredicted RBP17.52■□□□□ 0.39
LRP1-207ENST00000554174 PLB1Q6P1J6 1458 aa17.52■□□□□ 0.39
LRP1-207ENST00000554174 ZNF644Q9H582 1327 aaPredicted RBP17.51■□□□□ 0.39
LRP1-207ENST00000554174 TONSLQ96HA7 1378 aa17.51■□□□□ 0.39
LRP1-207ENST00000554174 NUP160Q12769 1436 aa17.5■□□□□ 0.39
LRP1-207ENST00000554174 AKNAQ7Z591 1439 aa17.49■□□□□ 0.39
LRP1-207ENST00000554174 PRG4Q92954 1404 aaPredicted RBP17.49■□□□□ 0.39
LRP1-207ENST00000554174 JPH4Q96JJ6 628 aa17.49■□□□□ 0.39
LRP1-207ENST00000554174 DDX10Q13206 875 aaKnown RBP17.47■□□□□ 0.39
LRP1-207ENST00000554174 DAPK1P53355 1430 aa17.47■□□□□ 0.39
LRP1-207ENST00000554174 TRIM52Q96A61 297 aa17.46■□□□□ 0.39
LRP1-207ENST00000554174 KDM5BQ9UGL1 1544 aa17.46■□□□□ 0.39
LRP1-207ENST00000554174 CDK11AQ9UQ88 783 aaPredicted RBP17.46■□□□□ 0.39
LRP1-207ENST00000554174 ABCC5O15440 1437 aa17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms