RNA–Protein interactions for RNA: ENST00000554035.5

RDH11-206, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-206ENST00000554035 EIF4G3O43432 1585 aaKnown RBP14.28□□□□□ -0.12
RDH11-206ENST00000554035 FHAD1B1AJZ9 1412 aa14.26□□□□□ -0.13
RDH11-206ENST00000554035 ADAMTS12P58397 1594 aa14.25□□□□□ -0.13
RDH11-206ENST00000554035 MAGI1Q96QZ7 1491 aaPredicted RBP14.22□□□□□ -0.13
RDH11-206ENST00000554035 CLIP1P30622 1438 aa14.21□□□□□ -0.13
RDH11-206ENST00000554035 SNAPC4Q5SXM2 1469 aa14.19□□□□□ -0.14
RDH11-206ENST00000554035 CTTNBP2Q8WZ74 1663 aa14.17□□□□□ -0.14
RDH11-206ENST00000554035 SYNJ2O15056 1496 aa14.15□□□□□ -0.14
RDH11-206ENST00000554035 GRIN2AQ12879 1464 aa14.12□□□□□ -0.15
RDH11-206ENST00000554035 ARHGAP35Q9NRY4 1499 aa14.11□□□□□ -0.15
RDH11-206ENST00000554035 ARAP1Q96P48 1450 aa14.1□□□□□ -0.15
RDH11-206ENST00000554035 EFCAB5A4FU69 1503 aa14.1□□□□□ -0.15
RDH11-206ENST00000554035 VPS8Q8N3P4 1428 aa14.09□□□□□ -0.15
RDH11-206ENST00000554035 KIAA0586Q9BVV6 1533 aa14.07□□□□□ -0.16
RDH11-206ENST00000554035 CHMP7Q8WUX9 453 aaPredicted RBP14.07□□□□□ -0.16
RDH11-206ENST00000554035 IQGAP2Q13576 1575 aa14.06□□□□□ -0.16
RDH11-206ENST00000554035 NUP160Q12769 1436 aa14.06□□□□□ -0.16
RDH11-206ENST00000554035 SAMD9Q5K651 1589 aa14.05□□□□□ -0.16
RDH11-206ENST00000554035 TRIM26Q12899 539 aaPredicted RBP14.04□□□□□ -0.16
RDH11-206ENST00000554035 UGGT2Q9NYU1 1516 aa14.03□□□□□ -0.16
RDH11-206ENST00000554035 CEP170Q5SW79 1584 aa14.03□□□□□ -0.16
RDH11-206ENST00000554035 RANGAP1P46060 587 aaPredicted RBP14.02□□□□□ -0.17
RDH11-206ENST00000554035 PCGF6Q9BYE7 350 aa13.98□□□□□ -0.17
RDH11-206ENST00000554035 CHD1O14646 1710 aa13.98□□□□□ -0.17
RDH11-206ENST00000554035 FBLN2P98095 1184 aa13.97□□□□□ -0.17
RDH11-206ENST00000554035 FHOD3Q2V2M9 1422 aa13.96□□□□□ -0.18
RDH11-206ENST00000554035 FMN1Q68DA7 1419 aa13.95□□□□□ -0.18
RDH11-206ENST00000554035 SCAF1Q9H7N4 1312 aaKnown RBP13.94□□□□□ -0.18
RDH11-206ENST00000554035 MAPK8IP2Q13387 824 aaPredicted RBP13.93□□□□□ -0.18
RDH11-206ENST00000554035 MAP3K1Q13233 1512 aa13.93□□□□□ -0.18
RDH11-206ENST00000554035 DISP1Q96F81 1524 aa13.93□□□□□ -0.18
RDH11-206ENST00000554035 KIAA0556O60303 1618 aa13.92□□□□□ -0.18
RDH11-206ENST00000554035 FYCO1Q9BQS8 1478 aa13.92□□□□□ -0.18
RDH11-206ENST00000554035 CASKIN1Q8WXD9 1431 aa13.91□□□□□ -0.18
RDH11-206ENST00000554035 P3H3Q8IVL6 736 aa13.91□□□□□ -0.18
RDH11-206ENST00000554035 JPH4Q96JJ6 628 aa13.9□□□□□ -0.18
RDH11-206ENST00000554035 DMRT2Q9Y5R5 561 aa13.9□□□□□ -0.18
RDH11-206ENST00000554035 PCF11O94913 1555 aaKnown RBP13.89□□□□□ -0.19
RDH11-206ENST00000554035 APLP2Q06481 763 aa13.89□□□□□ -0.19
RDH11-206ENST00000554035 CARMIL2Q6F5E8 1435 aa13.89□□□□□ -0.19
RDH11-206ENST00000554035 SHROOM2Q13796 1616 aa13.88□□□□□ -0.19
RDH11-206ENST00000554035 CLASP1Q7Z460 1538 aa13.88□□□□□ -0.19
RDH11-206ENST00000554035 TIAM1Q13009 1591 aa13.84□□□□□ -0.19
RDH11-206ENST00000554035 CFAP43Q8NDM7 1665 aa13.83□□□□□ -0.2
RDH11-206ENST00000554035 PRG4Q92954 1404 aaPredicted RBP13.81□□□□□ -0.2
RDH11-206ENST00000554035 PPARGC1BQ86YN6 1023 aaKnown RBP13.81□□□□□ -0.2
RDH11-206ENST00000554035 HECW1Q76N89 1606 aa13.81□□□□□ -0.2
RDH11-206ENST00000554035 HRCP23327 699 aa13.8□□□□□ -0.2
RDH11-206ENST00000554035 CCDC18Q5T9S5 1454 aa13.79□□□□□ -0.2
RDH11-206ENST00000554035 LRRC9Q6ZRR7 1453 aa13.78□□□□□ -0.2
RDH11-206ENST00000554035 KANK4Q5T7N3 995 aaPredicted RBP13.77□□□□□ -0.21
RDH11-206ENST00000554035 RAPGEF6Q8TEU7 1601 aa13.77□□□□□ -0.21
RDH11-206ENST00000554035 LRRIQ1Q96JM4 1722 aa13.76□□□□□ -0.21
RDH11-206ENST00000554035 ABCA8O94911 1581 aa13.75□□□□□ -0.21
RDH11-206ENST00000554035 EPRSP07814 1512 aaKnown RBP13.74□□□□□ -0.21
RDH11-206ENST00000554035 OSCARQ8IYS5 282 aa13.74□□□□□ -0.21
RDH11-206ENST00000554035 ATP1B4Q9UN42 357 aaPredicted RBP13.74□□□□□ -0.21
RDH11-206ENST00000554035 PTPRGP23470 1445 aa13.73□□□□□ -0.21
RDH11-206ENST00000554035 NUP153P49790 1475 aaKnown RBP13.73□□□□□ -0.21
RDH11-206ENST00000554035 PLB1Q6P1J6 1458 aa13.71□□□□□ -0.21
RDH11-206ENST00000554035 ERCC6L2Q5T890 1561 aa13.71□□□□□ -0.22
RDH11-206ENST00000554035 EHBP1L1Q8N3D4 1523 aa13.7□□□□□ -0.22
RDH11-206ENST00000554035 TTBK1Q5TCY1 1321 aaPredicted RBP13.69□□□□□ -0.22
RDH11-206ENST00000554035 MTUS2Q5JR59 1369 aa13.69□□□□□ -0.22
RDH11-206ENST00000554035 CDK13Q14004 1512 aaKnown RBP13.68□□□□□ -0.22
RDH11-206ENST00000554035 UACAQ9BZF9 1416 aa13.66□□□□□ -0.22
RDH11-206ENST00000554035 RRBP1Q9P2E9 1410 aaKnown RBP13.66□□□□□ -0.22
RDH11-206ENST00000554035 MAGI3Q5TCQ9 1506 aa13.66□□□□□ -0.22
RDH11-206ENST00000554035 UHRF1BP1LA0JNW5 1464 aa13.65□□□□□ -0.22
RDH11-206ENST00000554035 ARHGEF11O15085 1522 aa13.64□□□□□ -0.23
RDH11-206ENST00000554035 CDK11AQ9UQ88 783 aaPredicted RBP13.64□□□□□ -0.23
RDH11-206ENST00000554035 SUPT6HQ7KZ85 1726 aaKnown RBP13.64□□□□□ -0.23
RDH11-206ENST00000554035 ATP10BO94823 1461 aa13.63□□□□□ -0.23
RDH11-206ENST00000554035 ABCC2Q92887 1545 aa13.63□□□□□ -0.23
RDH11-206ENST00000554035 PHLDB1Q86UU1 1377 aa13.62□□□□□ -0.23
RDH11-206ENST00000554035 ZEB1P37275 1124 aaPredicted RBP13.62□□□□□ -0.23
RDH11-206ENST00000554035 NCOA2Q15596 1464 aa13.61□□□□□ -0.23
RDH11-206ENST00000554035 TROQ12816 1431 aaPredicted RBP13.61□□□□□ -0.23
RDH11-206ENST00000554035 CCNB3Q8WWL7 1395 aa13.6□□□□□ -0.23
RDH11-206ENST00000554035 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.59□□□□□ -0.23
RDH11-206ENST00000554035 ADCY10Q96PN6 1610 aa13.58□□□□□ -0.24
RDH11-206ENST00000554035 MYOM3Q5VTT5 1437 aa13.57□□□□□ -0.24
RDH11-206ENST00000554035 KDM5BQ9UGL1 1544 aa13.56□□□□□ -0.24
RDH11-206ENST00000554035 FGD6Q6ZV73 1430 aa13.56□□□□□ -0.24
RDH11-206ENST00000554035 PLEKHD1A6NEE1 506 aa13.55□□□□□ -0.24
RDH11-206ENST00000554035 ARID3CA6NKF2 412 aa13.55□□□□□ -0.24
RDH11-206ENST00000554035 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.55□□□□□ -0.24
RDH11-206ENST00000554035 HNRNPUL2Q1KMD3 747 aaKnown RBP13.55□□□□□ -0.24
RDH11-206ENST00000554035 PPP4R3CPQ6ZMV5 832 aa13.54□□□□□ -0.24
RDH11-206ENST00000554035 MIA2Q96PC5 1412 aa13.54□□□□□ -0.24
RDH11-206ENST00000554035 TCOF1Q13428 1488 aaKnown RBP13.52□□□□□ -0.25
RDH11-206ENST00000554035 ZCCHC11Q5TAX3 1644 aaKnown RBP13.52□□□□□ -0.25
RDH11-206ENST00000554035 KIF14Q15058 1648 aa13.51□□□□□ -0.25
RDH11-206ENST00000554035 ABCC10Q5T3U5 1492 aa13.49□□□□□ -0.25
RDH11-206ENST00000554035 PTPN23Q9H3S7 1636 aa13.49□□□□□ -0.25
RDH11-206ENST00000554035 ITSN2Q9NZM3 1697 aa13.48□□□□□ -0.25
RDH11-206ENST00000554035 GPATCH8Q9UKJ3 1502 aaKnown RBP13.47□□□□□ -0.25
RDH11-206ENST00000554035 FAM50AQ14320 339 aaKnown RBP13.45□□□□□ -0.26
RDH11-206ENST00000554035 RIMBP3CA6NJZ7 1639 aa13.44□□□□□ -0.26
RDH11-206ENST00000554035 RIMBP3BA6NNM3 1639 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms