RNA–Protein interactions for RNA: ENST00000553899.5

PSMC6-205, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-205ENST00000553899 GOLGA3Q08378 1498 aa22.3■■□□□ 1.16
PSMC6-205ENST00000553899 CTTNBP2Q8WZ74 1663 aa22.26■■□□□ 1.15
PSMC6-205ENST00000553899 IQGAP2Q13576 1575 aa22.22■■□□□ 1.15
PSMC6-205ENST00000553899 SHROOM2Q13796 1616 aa22.22■■□□□ 1.15
PSMC6-205ENST00000553899 JPH4Q96JJ6 628 aa22.16■■□□□ 1.14
PSMC6-205ENST00000553899 UGGT2Q9NYU1 1516 aa22.15■■□□□ 1.14
PSMC6-205ENST00000553899 UBTFP17480 764 aaKnown RBP22.13■■□□□ 1.13
PSMC6-205ENST00000553899 TNIKQ9UKE5 1360 aa22.12■■□□□ 1.13
PSMC6-205ENST00000553899 DNAJC5Q9H3Z4 198 aa22.11■■□□□ 1.13
PSMC6-205ENST00000553899 CARMIL2Q6F5E8 1435 aa22.06■■□□□ 1.12
PSMC6-205ENST00000553899 PRG4Q92954 1404 aaPredicted RBP22.06■■□□□ 1.12
PSMC6-205ENST00000553899 EFCAB5A4FU69 1503 aa22.03■■□□□ 1.12
PSMC6-205ENST00000553899 ARHGEF11O15085 1522 aa22.02■■□□□ 1.12
PSMC6-205ENST00000553899 DISP1Q96F81 1524 aa22.02■■□□□ 1.12
PSMC6-205ENST00000553899 SAMD9Q5K651 1589 aa22.01■■□□□ 1.11
PSMC6-205ENST00000553899 KIAA0556O60303 1618 aa21.98■■□□□ 1.11
PSMC6-205ENST00000553899 LOC105371045A0A1W2PR82 267 aa21.97■■□□□ 1.11
PSMC6-205ENST00000553899 RIMBP3CA6NJZ7 1639 aa21.96■■□□□ 1.11
PSMC6-205ENST00000553899 RIMBP3BA6NNM3 1639 aa21.96■■□□□ 1.11
PSMC6-205ENST00000553899 RIMBP3Q9UFD9 1639 aa21.96■■□□□ 1.11
PSMC6-205ENST00000553899 EHMT2Q96KQ7 1210 aa21.93■■□□□ 1.1
PSMC6-205ENST00000553899 ERCC6L2Q5T890 1561 aa21.92■■□□□ 1.1
PSMC6-205ENST00000553899 CLIP1P30622 1438 aa21.89■■□□□ 1.1
PSMC6-205ENST00000553899 ARHGAP35Q9NRY4 1499 aa21.89■■□□□ 1.09
PSMC6-205ENST00000553899 CEP162Q5TB80 1403 aa21.88■■□□□ 1.09
PSMC6-205ENST00000553899 PTPRGP23470 1445 aa21.87■■□□□ 1.09
PSMC6-205ENST00000553899 ARAP1Q96P48 1450 aa21.85■■□□□ 1.09
PSMC6-205ENST00000553899 FMN1Q68DA7 1419 aa21.81■■□□□ 1.08
PSMC6-205ENST00000553899 UHRF1BP1LA0JNW5 1464 aa21.78■■□□□ 1.08
PSMC6-205ENST00000553899 FHOD3Q2V2M9 1422 aa21.77■■□□□ 1.08
PSMC6-205ENST00000553899 RANGAP1P46060 587 aaPredicted RBP21.76■■□□□ 1.07
PSMC6-205ENST00000553899 UACAQ9BZF9 1416 aa21.74■■□□□ 1.07
PSMC6-205ENST00000553899 P3H3Q8IVL6 736 aa21.74■■□□□ 1.07
PSMC6-205ENST00000553899 ABCA8O94911 1581 aa21.74■■□□□ 1.07
PSMC6-205ENST00000553899 CYB5RLQ6IPT4 315 aa21.73■■□□□ 1.07
PSMC6-205ENST00000553899 ABCC2Q92887 1545 aa21.71■■□□□ 1.07
PSMC6-205ENST00000553899 RAPGEF6Q8TEU7 1601 aa21.68■■□□□ 1.06
PSMC6-205ENST00000553899 ADCY10Q96PN6 1610 aa21.67■■□□□ 1.06
PSMC6-205ENST00000553899 PLB1Q6P1J6 1458 aa21.67■■□□□ 1.06
PSMC6-205ENST00000553899 CASKIN1Q8WXD9 1431 aa21.66■■□□□ 1.06
PSMC6-205ENST00000553899 KDM5BQ9UGL1 1544 aa21.65■■□□□ 1.06
PSMC6-205ENST00000553899 FYCO1Q9BQS8 1478 aa21.64■■□□□ 1.05
PSMC6-205ENST00000553899 VPS8Q8N3P4 1428 aa21.63■■□□□ 1.05
PSMC6-205ENST00000553899 HECW1Q76N89 1606 aa21.62■■□□□ 1.05
PSMC6-205ENST00000553899 NUP153P49790 1475 aaKnown RBP21.6■■□□□ 1.05
PSMC6-205ENST00000553899 TTBK1Q5TCY1 1321 aaPredicted RBP21.58■■□□□ 1.05
PSMC6-205ENST00000553899 NPM1P06748 294 aaKnown RBP eCLIP21.58■■□□□ 1.05
PSMC6-205ENST00000553899 CCDC18Q5T9S5 1454 aa21.56■■□□□ 1.04
PSMC6-205ENST00000553899 PCF11O94913 1555 aaKnown RBP21.56■■□□□ 1.04
PSMC6-205ENST00000553899 MAPKBP1O60336 1514 aa21.55■■□□□ 1.04
PSMC6-205ENST00000553899 ATP10BO94823 1461 aa21.54■■□□□ 1.04
PSMC6-205ENST00000553899 ZCCHC11Q5TAX3 1644 aaKnown RBP21.53■■□□□ 1.04
PSMC6-205ENST00000553899 EPRSP07814 1512 aaKnown RBP21.53■■□□□ 1.04
PSMC6-205ENST00000553899 MAP3K1Q13233 1512 aa21.51■■□□□ 1.03
PSMC6-205ENST00000553899 CDK11AQ9UQ88 783 aaPredicted RBP21.48■■□□□ 1.03
PSMC6-205ENST00000553899 LRRIQ1Q96JM4 1722 aa21.47■■□□□ 1.03
PSMC6-205ENST00000553899 ASXL2Q76L83 1435 aa21.43■■□□□ 1.02
PSMC6-205ENST00000553899 WDR7Q9Y4E6 1490 aa21.41■■□□□ 1.02
PSMC6-205ENST00000553899 PLEKHD1A6NEE1 506 aa21.41■■□□□ 1.02
PSMC6-205ENST00000553899 ATP1B4Q9UN42 357 aaPredicted RBP21.41■■□□□ 1.02
PSMC6-205ENST00000553899 CDK13Q14004 1512 aaKnown RBP21.4■■□□□ 1.02
PSMC6-205ENST00000553899 CFAP43Q8NDM7 1665 aa21.4■■□□□ 1.02
PSMC6-205ENST00000553899 TIAM1Q13009 1591 aa21.39■■□□□ 1.01
PSMC6-205ENST00000553899 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.37■■□□□ 1.01
PSMC6-205ENST00000553899 HNRNPUL2Q1KMD3 747 aaKnown RBP21.37■■□□□ 1.01
PSMC6-205ENST00000553899 APLP2Q06481 763 aa21.36■■□□□ 1.01
PSMC6-205ENST00000553899 ABCC10Q5T3U5 1492 aa21.35■■□□□ 1.01
PSMC6-205ENST00000553899 TROQ12816 1431 aaPredicted RBP21.35■■□□□ 1.01
PSMC6-205ENST00000553899 GLI2P10070 1586 aa21.34■■□□□ 1.01
PSMC6-205ENST00000553899 ARID3CA6NKF2 412 aa21.31■■□□□ 1
PSMC6-205ENST00000553899 EHBP1L1Q8N3D4 1523 aa21.3■■□□□ 1
PSMC6-205ENST00000553899 LRRC9Q6ZRR7 1453 aa21.3■■□□□ 1
PSMC6-205ENST00000553899 DIP2BQ9P265 1576 aa21.3■■□□□ 1
PSMC6-205ENST00000553899 MTUS2Q5JR59 1369 aa21.29■■□□□ 1
PSMC6-205ENST00000553899 MAGI3Q5TCQ9 1506 aa21.28■■□□□ 1
PSMC6-205ENST00000553899 KIF14Q15058 1648 aa21.26■□□□□ 0.99
PSMC6-205ENST00000553899 ABCA9Q8IUA7 1624 aa21.26■□□□□ 0.99
PSMC6-205ENST00000553899 KIF13AQ9H1H9 1805 aa21.25■□□□□ 0.99
PSMC6-205ENST00000553899 MAP3K4Q9Y6R4 1608 aa21.22■□□□□ 0.99
PSMC6-205ENST00000553899 SUPT6HQ7KZ85 1726 aaKnown RBP21.21■□□□□ 0.99
PSMC6-205ENST00000553899 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.21■□□□□ 0.99
PSMC6-205ENST00000553899 KCNH8Q96L42 1107 aa21.21■□□□□ 0.99
PSMC6-205ENST00000553899 ARAP3Q8WWN8 1544 aa21.2■□□□□ 0.98
PSMC6-205ENST00000553899 FAM69CQ0P6D2 419 aa21.2■□□□□ 0.98
PSMC6-205ENST00000553899 KANK4Q5T7N3 995 aaPredicted RBP21.19■□□□□ 0.98
PSMC6-205ENST00000553899 CD109Q6YHK3 1445 aa21.15■□□□□ 0.98
PSMC6-205ENST00000553899 TTC37Q6PGP7 1564 aa21.14■□□□□ 0.98
PSMC6-205ENST00000553899 NCOA2Q15596 1464 aa21.14■□□□□ 0.98
PSMC6-205ENST00000553899 PLCH2O75038 1416 aa21.13■□□□□ 0.97
PSMC6-205ENST00000553899 MYO5CQ9NQX4 1742 aa21.13■□□□□ 0.97
PSMC6-205ENST00000553899 PHLDB1Q86UU1 1377 aa21.12■□□□□ 0.97
PSMC6-205ENST00000553899 TRHP20396 242 aaPredicted RBP21.12■□□□□ 0.97
PSMC6-205ENST00000553899 TEX14Q8IWB6 1497 aa21.11■□□□□ 0.97
PSMC6-205ENST00000553899 ITSN2Q9NZM3 1697 aa21.11■□□□□ 0.97
PSMC6-205ENST00000553899 GPATCH8Q9UKJ3 1502 aaKnown RBP21.1■□□□□ 0.97
PSMC6-205ENST00000553899 PREX2Q70Z35 1606 aa21.1■□□□□ 0.97
PSMC6-205ENST00000553899 CCNB3Q8WWL7 1395 aa21.1■□□□□ 0.97
PSMC6-205ENST00000553899 CDC42BPAQ5VT25 1732 aa21.09■□□□□ 0.97
PSMC6-205ENST00000553899 CFAP74Q9C0B2 1584 aa21.08■□□□□ 0.97
PSMC6-205ENST00000553899 NEO1Q92859 1461 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms