RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 RIMBP3CA6NJZ7 1639 aa15.6■□□□□ 0.09
CHD8-206ENST00000553870 RIMBP3BA6NNM3 1639 aa15.6■□□□□ 0.09
CHD8-206ENST00000553870 RIMBP3Q9UFD9 1639 aa15.6■□□□□ 0.09
CHD8-206ENST00000553870 RAPGEF2Q9Y4G8 1499 aa15.59■□□□□ 0.09
CHD8-206ENST00000553870 KIAA0586Q9BVV6 1533 aa15.58■□□□□ 0.09
CHD8-206ENST00000553870 PRXQ9BXM0 1461 aa15.55■□□□□ 0.08
CHD8-206ENST00000553870 CYB5RLQ6IPT4 315 aa15.55■□□□□ 0.08
CHD8-206ENST00000553870 SHROOM2Q13796 1616 aa15.53■□□□□ 0.08
CHD8-206ENST00000553870 ARAP1Q96P48 1450 aa15.5■□□□□ 0.07
CHD8-206ENST00000553870 PRG4Q92954 1404 aaPredicted RBP15.5■□□□□ 0.07
CHD8-206ENST00000553870 FAM9AQ8IZU1 332 aaPredicted RBP15.46■□□□□ 0.07
CHD8-206ENST00000553870 PHF23Q9BUL5 403 aaPredicted RBP15.44■□□□□ 0.06
CHD8-206ENST00000553870 IQGAP2Q13576 1575 aa15.43■□□□□ 0.06
CHD8-206ENST00000553870 CARMIL2Q6F5E8 1435 aa15.43■□□□□ 0.06
CHD8-206ENST00000553870 ERCC6L2Q5T890 1561 aa15.42■□□□□ 0.06
CHD8-206ENST00000553870 UGGT2Q9NYU1 1516 aa15.39■□□□□ 0.05
CHD8-206ENST00000553870 TNIKQ9UKE5 1360 aa15.36■□□□□ 0.05
CHD8-206ENST00000553870 KIF21BO75037 1637 aa15.36■□□□□ 0.05
CHD8-206ENST00000553870 PTPRGP23470 1445 aa15.35■□□□□ 0.05
CHD8-206ENST00000553870 CTTNBP2Q8WZ74 1663 aa15.35■□□□□ 0.05
CHD8-206ENST00000553870 GOLGA3Q08378 1498 aa15.34■□□□□ 0.05
CHD8-206ENST00000553870 DISP1Q96F81 1524 aa15.33■□□□□ 0.05
CHD8-206ENST00000553870 UBTFP17480 764 aaKnown RBP15.31■□□□□ 0.04
CHD8-206ENST00000553870 NPM1P06748 294 aaKnown RBP eCLIP15.3■□□□□ 0.04
CHD8-206ENST00000553870 KIAA0556O60303 1618 aa15.27■□□□□ 0.03
CHD8-206ENST00000553870 TTBK1Q5TCY1 1321 aaPredicted RBP15.24■□□□□ 0.03
CHD8-206ENST00000553870 UACAQ9BZF9 1416 aa15.24■□□□□ 0.03
CHD8-206ENST00000553870 UHRF1BP1LA0JNW5 1464 aa15.23■□□□□ 0.03
CHD8-206ENST00000553870 TRHP20396 242 aaPredicted RBP15.2■□□□□ 0.02
CHD8-206ENST00000553870 SAMD9Q5K651 1589 aa15.19■□□□□ 0.02
CHD8-206ENST00000553870 ADCY10Q96PN6 1610 aa15.19■□□□□ 0.02
CHD8-206ENST00000553870 P3H3Q8IVL6 736 aa15.19■□□□□ 0.02
CHD8-206ENST00000553870 EHMT2Q96KQ7 1210 aa15.19■□□□□ 0.02
CHD8-206ENST00000553870 ABCC2Q92887 1545 aa15.18■□□□□ 0.02
CHD8-206ENST00000553870 EFCAB5A4FU69 1503 aa15.17■□□□□ 0.02
CHD8-206ENST00000553870 RANGAP1P46060 587 aaPredicted RBP15.17■□□□□ 0.02
CHD8-206ENST00000553870 MAPKBP1O60336 1514 aa15.15■□□□□ 0.02
CHD8-206ENST00000553870 KDM5BQ9UGL1 1544 aa15.14■□□□□ 0.01
CHD8-206ENST00000553870 ABCA8O94911 1581 aa15.14■□□□□ 0.01
CHD8-206ENST00000553870 PLB1Q6P1J6 1458 aa15.14■□□□□ 0.01
CHD8-206ENST00000553870 FHOD3Q2V2M9 1422 aa15.1■□□□□ 0.01
CHD8-206ENST00000553870 ABCC10Q5T3U5 1492 aa15.09■□□□□ 0.01
CHD8-206ENST00000553870 ARHGAP35Q9NRY4 1499 aa15.08■□□□□ 0.01
CHD8-206ENST00000553870 FAM69CQ0P6D2 419 aa15.08■□□□□ 0
CHD8-206ENST00000553870 FMN1Q68DA7 1419 aa15.08■□□□□ 0
CHD8-206ENST00000553870 ASXL2Q76L83 1435 aa15.07■□□□□ 0
CHD8-206ENST00000553870 RAPGEF6Q8TEU7 1601 aa15.04■□□□□ -0
CHD8-206ENST00000553870 ATP10BO94823 1461 aa15.04■□□□□ -0
CHD8-206ENST00000553870 ZCCHC11Q5TAX3 1644 aaKnown RBP15.03■□□□□ -0
CHD8-206ENST00000553870 CLIP1P30622 1438 aa15.03■□□□□ -0
CHD8-206ENST00000553870 LOC105371045A0A1W2PR82 267 aa15.02■□□□□ -0
CHD8-206ENST00000553870 NUP153P49790 1475 aaKnown RBP15.01□□□□□ -0.01
CHD8-206ENST00000553870 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15□□□□□ -0.01
CHD8-206ENST00000553870 HNRNPUL2Q1KMD3 747 aaKnown RBP15□□□□□ -0.01
CHD8-206ENST00000553870 WDR7Q9Y4E6 1490 aa15□□□□□ -0.01
CHD8-206ENST00000553870 GLI2P10070 1586 aa14.99□□□□□ -0.01
CHD8-206ENST00000553870 DIP2BQ9P265 1576 aa14.99□□□□□ -0.01
CHD8-206ENST00000553870 EPRSP07814 1512 aaKnown RBP14.98□□□□□ -0.01
CHD8-206ENST00000553870 PLEKHD1A6NEE1 506 aa14.98□□□□□ -0.01
CHD8-206ENST00000553870 KIF13AQ9H1H9 1805 aa14.98□□□□□ -0.01
CHD8-206ENST00000553870 ARID3CA6NKF2 412 aa14.97□□□□□ -0.01
CHD8-206ENST00000553870 KCNH8Q96L42 1107 aa14.96□□□□□ -0.01
CHD8-206ENST00000553870 ATP1B4Q9UN42 357 aaPredicted RBP14.96□□□□□ -0.01
CHD8-206ENST00000553870 CDK11AQ9UQ88 783 aaPredicted RBP14.96□□□□□ -0.01
CHD8-206ENST00000553870 CEP162Q5TB80 1403 aa14.95□□□□□ -0.02
CHD8-206ENST00000553870 CASKIN1Q8WXD9 1431 aa14.95□□□□□ -0.02
CHD8-206ENST00000553870 HECW1Q76N89 1606 aa14.92□□□□□ -0.02
CHD8-206ENST00000553870 CD109Q6YHK3 1445 aa14.89□□□□□ -0.03
CHD8-206ENST00000553870 FYCO1Q9BQS8 1478 aa14.89□□□□□ -0.03
CHD8-206ENST00000553870 CCDC18Q5T9S5 1454 aa14.88□□□□□ -0.03
CHD8-206ENST00000553870 FOXD1Q16676 465 aa14.87□□□□□ -0.03
CHD8-206ENST00000553870 MAP3K4Q9Y6R4 1608 aa14.87□□□□□ -0.03
CHD8-206ENST00000553870 TEX14Q8IWB6 1497 aa14.87□□□□□ -0.03
CHD8-206ENST00000553870 CDK13Q14004 1512 aaKnown RBP14.86□□□□□ -0.03
CHD8-206ENST00000553870 MAGI3Q5TCQ9 1506 aa14.86□□□□□ -0.03
CHD8-206ENST00000553870 CFAP43Q8NDM7 1665 aa14.85□□□□□ -0.03
CHD8-206ENST00000553870 PHLDB1Q86UU1 1377 aa14.84□□□□□ -0.03
CHD8-206ENST00000553870 PCF11O94913 1555 aaKnown RBP14.83□□□□□ -0.04
CHD8-206ENST00000553870 ABCA9Q8IUA7 1624 aa14.83□□□□□ -0.04
CHD8-206ENST00000553870 TROQ12816 1431 aaPredicted RBP14.83□□□□□ -0.04
CHD8-206ENST00000553870 TSPOAP1O95153 1857 aa14.82□□□□□ -0.04
CHD8-206ENST00000553870 PPRC1Q5VV67 1664 aaKnown RBP14.8□□□□□ -0.04
CHD8-206ENST00000553870 VPS8Q8N3P4 1428 aa14.79□□□□□ -0.04
CHD8-206ENST00000553870 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.77□□□□□ -0.04
CHD8-206ENST00000553870 LRRIQ1Q96JM4 1722 aa14.77□□□□□ -0.05
CHD8-206ENST00000553870 KDM6BO15054 1643 aa14.76□□□□□ -0.05
CHD8-206ENST00000553870 NEO1Q92859 1461 aa14.76□□□□□ -0.05
CHD8-206ENST00000553870 PLCH2O75038 1416 aa14.75□□□□□ -0.05
CHD8-206ENST00000553870 EFCAB2Q5VUJ9 269 aa14.74□□□□□ -0.05
CHD8-206ENST00000553870 KIF14Q15058 1648 aa14.74□□□□□ -0.05
CHD8-206ENST00000553870 MTUS2Q5JR59 1369 aa14.73□□□□□ -0.05
CHD8-206ENST00000553870 ARAP3Q8WWN8 1544 aa14.73□□□□□ -0.05
CHD8-206ENST00000553870 COL17A1Q9UMD9 1497 aaPredicted RBP14.72□□□□□ -0.05
CHD8-206ENST00000553870 APLP2Q06481 763 aa14.71□□□□□ -0.05
CHD8-206ENST00000553870 MAP3K1Q13233 1512 aa14.71□□□□□ -0.06
CHD8-206ENST00000553870 FANCAO15360 1455 aa14.7□□□□□ -0.06
CHD8-206ENST00000553870 TTC37Q6PGP7 1564 aa14.7□□□□□ -0.06
CHD8-206ENST00000553870 AKNAQ7Z591 1439 aa14.7□□□□□ -0.06
CHD8-206ENST00000553870 CFAP74Q9C0B2 1584 aa14.68□□□□□ -0.06
CHD8-206ENST00000553870 TIAM1Q13009 1591 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms