RNA–Protein interactions for RNA: ENST00000553665.5

PSMA3-203, Transcript of proteasome subunit alpha 3, humanhuman

TSL 2

Gene PSMA3, Length 925 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-203ENST00000553665 SPDYE2Q495Y8 402 aa12.55□□□□□ -0.4
PSMA3-203ENST00000553665 RSF1Q96T23 1441 aaPredicted RBP12.54□□□□□ -0.4
PSMA3-203ENST00000553665 RTN4Q9NQC3 1192 aaKnown RBP12.51□□□□□ -0.41
PSMA3-203ENST00000553665 ATXN8OSP0DMR3 200 aa12.48□□□□□ -0.41
PSMA3-203ENST00000553665 AMER1Q5JTC6 1135 aaPredicted RBP12.48□□□□□ -0.41
PSMA3-203ENST00000553665 SPDYE1Q8NFV5 336 aaPredicted RBP12.48□□□□□ -0.41
PSMA3-203ENST00000553665 THOC2Q8NI27 1593 aaKnown RBP12.47□□□□□ -0.41
PSMA3-203ENST00000553665 ZBTB22O15209 634 aa12.46□□□□□ -0.41
PSMA3-203ENST00000553665 KIF21AQ7Z4S6 1674 aa12.45□□□□□ -0.42
PSMA3-203ENST00000553665 FBLN2P98095 1184 aa12.42□□□□□ -0.42
PSMA3-203ENST00000553665 TOP2AP11388 1531 aaKnown RBP12.42□□□□□ -0.42
PSMA3-203ENST00000553665 MRC2Q9UBG0 1479 aa12.4□□□□□ -0.42
PSMA3-203ENST00000553665 CFTRP13569 1480 aa12.4□□□□□ -0.43
PSMA3-203ENST00000553665 CLEC11AQ9Y240 323 aa12.38□□□□□ -0.43
PSMA3-203ENST00000553665 FANCD2Q9BXW9 1451 aa12.38□□□□□ -0.43
PSMA3-203ENST00000553665 CEP164Q9UPV0 1460 aa12.37□□□□□ -0.43
PSMA3-203ENST00000553665 WDR62O43379 1518 aa12.34□□□□□ -0.43
PSMA3-203ENST00000553665 CCDC88BA6NC98 1476 aa12.34□□□□□ -0.43
PSMA3-203ENST00000553665 POTEIP0CG38 1075 aa12.33□□□□□ -0.44
PSMA3-203ENST00000553665 SSUH2Q9Y2M2 353 aa12.33□□□□□ -0.44
PSMA3-203ENST00000553665 PLSCR2Q9NRY7 297 aa12.3□□□□□ -0.44
PSMA3-203ENST00000553665 CLCN6P51797 869 aa12.27□□□□□ -0.45
PSMA3-203ENST00000553665 URB2Q14146 1524 aaKnown RBP12.27□□□□□ -0.45
PSMA3-203ENST00000553665 CHADLQ6NUI6 762 aa12.24□□□□□ -0.45
PSMA3-203ENST00000553665 ZNF692Q9BU19 519 aaPredicted RBP12.24□□□□□ -0.45
PSMA3-203ENST00000553665 MKRN4PQ13434 485 aaPredicted RBP12.22□□□□□ -0.45
PSMA3-203ENST00000553665 TOPBP1Q92547 1522 aa12.16□□□□□ -0.46
PSMA3-203ENST00000553665 PRDM2Q13029 1718 aa12.15□□□□□ -0.46
PSMA3-203ENST00000553665 PRR29P0C7W0 189 aa12.15□□□□□ -0.46
PSMA3-203ENST00000553665 SUPT5HO00267 1087 aaKnown RBP12.14□□□□□ -0.47
PSMA3-203ENST00000553665 ABCC8Q09428 1581 aa12.13□□□□□ -0.47
PSMA3-203ENST00000553665 CD44P16070 742 aaKnown RBP12.13□□□□□ -0.47
PSMA3-203ENST00000553665 TRIM41Q8WV44 630 aa12.13□□□□□ -0.47
PSMA3-203ENST00000553665 IFT140Q96RY7 1462 aa12.13□□□□□ -0.47
PSMA3-203ENST00000553665 ZNF608Q9ULD9 1512 aaPredicted RBP12.11□□□□□ -0.47
PSMA3-203ENST00000553665 DNMBPQ6XZF7 1577 aa12.08□□□□□ -0.48
PSMA3-203ENST00000553665 FARP1Q9Y4F1 1045 aaPredicted RBP12.07□□□□□ -0.48
PSMA3-203ENST00000553665 AQRO60306 1485 aaKnown RBP eCLIP12.05□□□□□ -0.481e-10■■■■■ 54.7
PSMA3-203ENST00000553665 DCBLD2Q96PD2 775 aa12.04□□□□□ -0.48
PSMA3-203ENST00000553665 SOGA1O94964 1423 aa12.03□□□□□ -0.48
PSMA3-203ENST00000553665 POLA1P09884 1462 aaPredicted RBP12.03□□□□□ -0.48
PSMA3-203ENST00000553665 RAD54L2Q9Y4B4 1467 aa12.02□□□□□ -0.48
PSMA3-203ENST00000553665 TDRD9Q8NDG6 1382 aaKnown RBP12.01□□□□□ -0.49
PSMA3-203ENST00000553665 TARBP1Q13395 1621 aaKnown RBP12□□□□□ -0.49
PSMA3-203ENST00000553665 OTUD5Q96G74 571 aa11.99□□□□□ -0.49
PSMA3-203ENST00000553665 EIF4G3O43432 1585 aaKnown RBP11.98□□□□□ -0.49
PSMA3-203ENST00000553665 ZNF579Q8NAF0 562 aaKnown RBP11.98□□□□□ -0.49
PSMA3-203ENST00000553665 FGD5Q6ZNL6 1462 aa11.97□□□□□ -0.49
PSMA3-203ENST00000553665 CUX1P39880 1505 aa11.96□□□□□ -0.49
PSMA3-203ENST00000553665 POTEMA6NI47 508 aa11.92□□□□□ -0.5
PSMA3-203ENST00000553665 CHMP7Q8WUX9 453 aaPredicted RBP11.92□□□□□ -0.5
PSMA3-203ENST00000553665 CYB5RLQ6IPT4 315 aa11.91□□□□□ -0.5
PSMA3-203ENST00000553665 PCDH10Q9P2E7 1040 aa11.91□□□□□ -0.5
PSMA3-203ENST00000553665 RIMBP3CA6NJZ7 1639 aa11.89□□□□□ -0.51
PSMA3-203ENST00000553665 RIMBP3BA6NNM3 1639 aa11.89□□□□□ -0.51
PSMA3-203ENST00000553665 RIMBP3Q9UFD9 1639 aa11.89□□□□□ -0.51
PSMA3-203ENST00000553665 ARHGEF11O15085 1522 aa11.89□□□□□ -0.51
PSMA3-203ENST00000553665 SNAPC4Q5SXM2 1469 aa11.89□□□□□ -0.51
PSMA3-203ENST00000553665 POTEB2H3BUK9 544 aa11.88□□□□□ -0.51
PSMA3-203ENST00000553665 GRIN2BQ13224 1484 aa11.88□□□□□ -0.51
PSMA3-203ENST00000553665 CHD1O14646 1710 aa11.87□□□□□ -0.51
PSMA3-203ENST00000553665 POTEGQ6S5H5 508 aa11.87□□□□□ -0.51
PSMA3-203ENST00000553665 WDR97A6NE52 1622 aa11.86□□□□□ -0.51
PSMA3-203ENST00000553665 GAPVD1Q14C86 1478 aa11.85□□□□□ -0.51
PSMA3-203ENST00000553665 MAGI1Q96QZ7 1491 aaPredicted RBP11.84□□□□□ -0.51
PSMA3-203ENST00000553665 ZRANB1Q9UGI0 708 aa11.84□□□□□ -0.51
PSMA3-203ENST00000553665 WRNQ14191 1432 aaPredicted RBP eCLIP11.84□□□□□ -0.51
PSMA3-203ENST00000553665 ABCA10Q8WWZ4 1543 aa11.83□□□□□ -0.52
PSMA3-203ENST00000553665 SYNJ2O15056 1496 aa11.82□□□□□ -0.52
PSMA3-203ENST00000553665 GALR2O43603 387 aaPredicted RBP11.81□□□□□ -0.52
PSMA3-203ENST00000553665 ARAP1Q96P48 1450 aa11.78□□□□□ -0.52
PSMA3-203ENST00000553665 SYNJ1O43426 1573 aa11.78□□□□□ -0.52
PSMA3-203ENST00000553665 TOP2BQ02880 1626 aa11.77□□□□□ -0.53
PSMA3-203ENST00000553665 CLASP1Q7Z460 1538 aa11.76□□□□□ -0.53
PSMA3-203ENST00000553665 ABCA5Q8WWZ7 1642 aa11.76□□□□□ -0.53
PSMA3-203ENST00000553665 BIVM-ERCC5R4GMW8 1640 aa11.75□□□□□ -0.53
PSMA3-203ENST00000553665 PBRM1Q86U86 1689 aa11.75□□□□□ -0.53
PSMA3-203ENST00000553665 CREBZFQ9NS37 354 aa11.72□□□□□ -0.53
PSMA3-203ENST00000553665 GRIN2AQ12879 1464 aa11.71□□□□□ -0.53
PSMA3-203ENST00000553665 FHAD1B1AJZ9 1412 aa11.7□□□□□ -0.54
PSMA3-203ENST00000553665 FKBP8Q14318 412 aa11.69□□□□□ -0.54
PSMA3-203ENST00000553665 STAG3Q9UJ98 1225 aa11.69□□□□□ -0.54
PSMA3-203ENST00000553665 PELP1Q8IZL8 1130 aaKnown RBP11.68□□□□□ -0.54
PSMA3-203ENST00000553665 ERICH3Q5RHP9 1530 aa11.67□□□□□ -0.54
PSMA3-203ENST00000553665 NUP160Q12769 1436 aa11.67□□□□□ -0.54
PSMA3-203ENST00000553665 ADAMTS12P58397 1594 aa11.67□□□□□ -0.54
PSMA3-203ENST00000553665 CEP170Q5SW79 1584 aa11.64□□□□□ -0.55
PSMA3-203ENST00000553665 JPH4Q96JJ6 628 aa11.64□□□□□ -0.55
PSMA3-203ENST00000553665 IGF1RP08069 1367 aa11.63□□□□□ -0.55
PSMA3-203ENST00000553665 ERCC6L2Q5T890 1561 aa11.62□□□□□ -0.55
PSMA3-203ENST00000553665 LCE2DQ5TA82 110 aaPredicted RBP11.62□□□□□ -0.55
PSMA3-203ENST00000553665 POTEJP0CG39 1038 aa11.61□□□□□ -0.55
PSMA3-203ENST00000553665 ASTLQ6HA08 431 aaPredicted RBP11.61□□□□□ -0.55
PSMA3-203ENST00000553665 KIF27Q86VH2 1401 aa11.6□□□□□ -0.55
PSMA3-203ENST00000553665 PAK3O75914 559 aaPredicted RBP11.6□□□□□ -0.55
PSMA3-203ENST00000553665 MAMSTRQ6ZN01 415 aa11.6□□□□□ -0.55
PSMA3-203ENST00000553665 PHF12Q96QT6 1004 aa11.6□□□□□ -0.55
PSMA3-203ENST00000553665 C7P10643 843 aa11.59□□□□□ -0.55
PSMA3-203ENST00000553665 PRG4Q92954 1404 aaPredicted RBP11.59□□□□□ -0.55
PSMA3-203ENST00000553665 METRNQ9UJH8 293 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms