RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 ARHGAP35Q9NRY4 1499 aa27.89■■■□□ 2.05
PSEN1-206ENST00000553447 CHMP7Q8WUX9 453 aaPredicted RBP27.88■■■□□ 2.05
PSEN1-206ENST00000553447 CHD1O14646 1710 aa27.87■■■□□ 2.05
PSEN1-206ENST00000553447 IQGAP2Q13576 1575 aa27.86■■■□□ 2.05
PSEN1-206ENST00000553447 ARAP1Q96P48 1450 aa27.85■■■□□ 2.05
PSEN1-206ENST00000553447 EFCAB5A4FU69 1503 aa27.84■■■□□ 2.05
PSEN1-206ENST00000553447 CEP170Q5SW79 1584 aa27.84■■■□□ 2.05
PSEN1-206ENST00000553447 FBLN2P98095 1184 aa27.8■■■□□ 2.04
PSEN1-206ENST00000553447 KIAA0586Q9BVV6 1533 aa27.8■■■□□ 2.04
PSEN1-206ENST00000553447 SAMD9Q5K651 1589 aa27.79■■■□□ 2.04
PSEN1-206ENST00000553447 NUP160Q12769 1436 aa27.79■■■□□ 2.04
PSEN1-206ENST00000553447 VPS8Q8N3P4 1428 aa27.79■■■□□ 2.04
PSEN1-206ENST00000553447 UGGT2Q9NYU1 1516 aa27.72■■■□□ 2.03
PSEN1-206ENST00000553447 FHOD3Q2V2M9 1422 aa27.65■■■□□ 2.02
PSEN1-206ENST00000553447 P3H3Q8IVL6 736 aa27.62■■■□□ 2.01
PSEN1-206ENST00000553447 KIAA0556O60303 1618 aa27.59■■■□□ 2.01
PSEN1-206ENST00000553447 DISP1Q96F81 1524 aa27.57■■■□□ 2
PSEN1-206ENST00000553447 PCF11O94913 1555 aaKnown RBP27.53■■■□□ 2
PSEN1-206ENST00000553447 FMN1Q68DA7 1419 aa27.53■■■□□ 2
PSEN1-206ENST00000553447 SHROOM2Q13796 1616 aa27.51■■□□□ 1.99
PSEN1-206ENST00000553447 CLASP1Q7Z460 1538 aa27.51■■□□□ 1.99
PSEN1-206ENST00000553447 JPH4Q96JJ6 628 aa27.5■■□□□ 1.99
PSEN1-206ENST00000553447 FYCO1Q9BQS8 1478 aa27.46■■□□□ 1.99
PSEN1-206ENST00000553447 CASKIN1Q8WXD9 1431 aa27.46■■□□□ 1.99
PSEN1-206ENST00000553447 CARMIL2Q6F5E8 1435 aa27.45■■□□□ 1.98
PSEN1-206ENST00000553447 APLP2Q06481 763 aa27.44■■□□□ 1.98
PSEN1-206ENST00000553447 PPARGC1BQ86YN6 1023 aaKnown RBP27.42■■□□□ 1.98
PSEN1-206ENST00000553447 CFAP43Q8NDM7 1665 aa27.4■■□□□ 1.98
PSEN1-206ENST00000553447 MAP3K1Q13233 1512 aa27.39■■□□□ 1.98
PSEN1-206ENST00000553447 PRG4Q92954 1404 aaPredicted RBP27.38■■□□□ 1.97
PSEN1-206ENST00000553447 TIAM1Q13009 1591 aa27.38■■□□□ 1.97
PSEN1-206ENST00000553447 LRRIQ1Q96JM4 1722 aa27.36■■□□□ 1.97
PSEN1-206ENST00000553447 HECW1Q76N89 1606 aa27.34■■□□□ 1.97
PSEN1-206ENST00000553447 RAPGEF6Q8TEU7 1601 aa27.3■■□□□ 1.96
PSEN1-206ENST00000553447 TRIM26Q12899 539 aaPredicted RBP27.28■■□□□ 1.96
PSEN1-206ENST00000553447 ATP1B4Q9UN42 357 aaPredicted RBP27.28■■□□□ 1.96
PSEN1-206ENST00000553447 ERCC6L2Q5T890 1561 aa27.26■■□□□ 1.96
PSEN1-206ENST00000553447 TTBK1Q5TCY1 1321 aaPredicted RBP27.25■■□□□ 1.95
PSEN1-206ENST00000553447 OSCARQ8IYS5 282 aa27.25■■□□□ 1.95
PSEN1-206ENST00000553447 CCDC18Q5T9S5 1454 aa27.23■■□□□ 1.95
PSEN1-206ENST00000553447 KANK4Q5T7N3 995 aaPredicted RBP27.22■■□□□ 1.95
PSEN1-206ENST00000553447 LRRC9Q6ZRR7 1453 aa27.21■■□□□ 1.95
PSEN1-206ENST00000553447 ABCA8O94911 1581 aa27.2■■□□□ 1.94
PSEN1-206ENST00000553447 EPRSP07814 1512 aaKnown RBP27.19■■□□□ 1.94
PSEN1-206ENST00000553447 PLB1Q6P1J6 1458 aa27.19■■□□□ 1.94
PSEN1-206ENST00000553447 PTPRGP23470 1445 aa27.17■■□□□ 1.94
PSEN1-206ENST00000553447 NUP153P49790 1475 aaKnown RBP27.17■■□□□ 1.94
PSEN1-206ENST00000553447 PCGF6Q9BYE7 350 aa27.15■■□□□ 1.94
PSEN1-206ENST00000553447 CDK13Q14004 1512 aaKnown RBP27.12■■□□□ 1.93
PSEN1-206ENST00000553447 EHBP1L1Q8N3D4 1523 aa27.08■■□□□ 1.93
PSEN1-206ENST00000553447 MAGI3Q5TCQ9 1506 aa27.06■■□□□ 1.92
PSEN1-206ENST00000553447 MTUS2Q5JR59 1369 aa27.04■■□□□ 1.92
PSEN1-206ENST00000553447 UACAQ9BZF9 1416 aa27.04■■□□□ 1.92
PSEN1-206ENST00000553447 SUPT6HQ7KZ85 1726 aaKnown RBP27.02■■□□□ 1.92
PSEN1-206ENST00000553447 ABCC2Q92887 1545 aa27■■□□□ 1.91
PSEN1-206ENST00000553447 ARID3CA6NKF2 412 aa27■■□□□ 1.91
PSEN1-206ENST00000553447 ATP10BO94823 1461 aa26.96■■□□□ 1.91
PSEN1-206ENST00000553447 UHRF1BP1LA0JNW5 1464 aa26.95■■□□□ 1.91
PSEN1-206ENST00000553447 RRBP1Q9P2E9 1410 aaKnown RBP26.92■■□□□ 1.9
PSEN1-206ENST00000553447 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.92■■□□□ 1.9
PSEN1-206ENST00000553447 HNRNPUL2Q1KMD3 747 aaKnown RBP26.92■■□□□ 1.9
PSEN1-206ENST00000553447 CDK11AQ9UQ88 783 aaPredicted RBP26.92■■□□□ 1.9
PSEN1-206ENST00000553447 PHLDB1Q86UU1 1377 aa26.92■■□□□ 1.9
PSEN1-206ENST00000553447 NCOA2Q15596 1464 aa26.92■■□□□ 1.9
PSEN1-206ENST00000553447 ARHGEF11O15085 1522 aa26.91■■□□□ 1.9
PSEN1-206ENST00000553447 ADCY10Q96PN6 1610 aa26.88■■□□□ 1.89
PSEN1-206ENST00000553447 TROQ12816 1431 aaPredicted RBP26.88■■□□□ 1.89
PSEN1-206ENST00000553447 ZCCHC11Q5TAX3 1644 aaKnown RBP26.86■■□□□ 1.89
PSEN1-206ENST00000553447 KDM5BQ9UGL1 1544 aa26.83■■□□□ 1.89
PSEN1-206ENST00000553447 CCNB3Q8WWL7 1395 aa26.83■■□□□ 1.88
PSEN1-206ENST00000553447 KIF14Q15058 1648 aa26.8■■□□□ 1.88
PSEN1-206ENST00000553447 MYOM3Q5VTT5 1437 aa26.8■■□□□ 1.88
PSEN1-206ENST00000553447 PLEKHD1A6NEE1 506 aa26.79■■□□□ 1.88
PSEN1-206ENST00000553447 RIMBP3CA6NJZ7 1639 aa26.79■■□□□ 1.88
PSEN1-206ENST00000553447 RIMBP3BA6NNM3 1639 aa26.79■■□□□ 1.88
PSEN1-206ENST00000553447 RIMBP3Q9UFD9 1639 aa26.79■■□□□ 1.88
PSEN1-206ENST00000553447 FGD6Q6ZV73 1430 aa26.76■■□□□ 1.87
PSEN1-206ENST00000553447 ITSN2Q9NZM3 1697 aa26.73■■□□□ 1.87
PSEN1-206ENST00000553447 PTPN23Q9H3S7 1636 aa26.7■■□□□ 1.86
PSEN1-206ENST00000553447 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.7■■□□□ 1.86
PSEN1-206ENST00000553447 ABCC10Q5T3U5 1492 aa26.68■■□□□ 1.86
PSEN1-206ENST00000553447 CDC42BPAQ5VT25 1732 aa26.67■■□□□ 1.86
PSEN1-206ENST00000553447 MIA2Q96PC5 1412 aa26.66■■□□□ 1.86
PSEN1-206ENST00000553447 TCOF1Q13428 1488 aaKnown RBP26.65■■□□□ 1.86
PSEN1-206ENST00000553447 FAM50AQ14320 339 aaKnown RBP26.64■■□□□ 1.86
PSEN1-206ENST00000553447 GPATCH8Q9UKJ3 1502 aaKnown RBP26.62■■□□□ 1.85
PSEN1-206ENST00000553447 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.59■■□□□ 1.85
PSEN1-206ENST00000553447 TTC37Q6PGP7 1564 aa26.58■■□□□ 1.85
PSEN1-206ENST00000553447 WDR7Q9Y4E6 1490 aa26.58■■□□□ 1.85
PSEN1-206ENST00000553447 PREX2Q70Z35 1606 aa26.57■■□□□ 1.84
PSEN1-206ENST00000553447 MYO5CQ9NQX4 1742 aa26.56■■□□□ 1.84
PSEN1-206ENST00000553447 CDC42BPBQ9Y5S2 1711 aa26.54■■□□□ 1.84
PSEN1-206ENST00000553447 NPM1P06748 294 aaKnown RBP eCLIP26.54■■□□□ 1.84
PSEN1-206ENST00000553447 ASXL2Q76L83 1435 aa26.53■■□□□ 1.84
PSEN1-206ENST00000553447 ITGAEP38570 1179 aa26.52■■□□□ 1.84
PSEN1-206ENST00000553447 CYB5RLQ6IPT4 315 aa26.52■■□□□ 1.84
PSEN1-206ENST00000553447 KCNH8Q96L42 1107 aa26.5■■□□□ 1.83
PSEN1-206ENST00000553447 CFDP1Q9UEE9 299 aaPredicted RBP26.5■■□□□ 1.83
PSEN1-206ENST00000553447 CAMSAP2Q08AD1 1489 aa26.49■■□□□ 1.83
PSEN1-206ENST00000553447 DNMT1P26358 1616 aaKnown RBP26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms