RNA–Protein interactions for RNA: ENST00000552763.1

MMP19-208, Transcript of matrix metallopeptidase 19, humanhuman

TSL 2

Gene MMP19, Length 946 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-208ENST00000552763 RIMBP3BA6NNM3 1639 aa32.07■■■□□ 2.72
MMP19-208ENST00000552763 RIMBP3Q9UFD9 1639 aa32.07■■■□□ 2.72
MMP19-208ENST00000552763 KIAA0586Q9BVV6 1533 aa32.05■■■□□ 2.72
MMP19-208ENST00000552763 JPH4Q96JJ6 628 aa32.04■■■□□ 2.72
MMP19-208ENST00000552763 SHROOM2Q13796 1616 aa31.95■■■□□ 2.71
MMP19-208ENST00000552763 CYB5RLQ6IPT4 315 aa31.92■■■□□ 2.7
MMP19-208ENST00000552763 PRG4Q92954 1404 aaPredicted RBP31.92■■■□□ 2.7
MMP19-208ENST00000552763 ARAP1Q96P48 1450 aa31.88■■■□□ 2.69
MMP19-208ENST00000552763 ERCC6L2Q5T890 1561 aa31.87■■■□□ 2.69
MMP19-208ENST00000552763 IQGAP2Q13576 1575 aa31.84■■■□□ 2.69
MMP19-208ENST00000552763 KIF21BO75037 1637 aa31.78■■■□□ 2.68
MMP19-208ENST00000552763 EHMT2Q96KQ7 1210 aa31.72■■■□□ 2.67
MMP19-208ENST00000552763 CTTNBP2Q8WZ74 1663 aa31.72■■■□□ 2.67
MMP19-208ENST00000552763 CARMIL2Q6F5E8 1435 aa31.71■■■□□ 2.67
MMP19-208ENST00000552763 UGGT2Q9NYU1 1516 aa31.7■■■□□ 2.67
MMP19-208ENST00000552763 GOLGA3Q08378 1498 aa31.65■■■□□ 2.66
MMP19-208ENST00000552763 UBTFP17480 764 aaKnown RBP31.65■■■□□ 2.66
MMP19-208ENST00000552763 DISP1Q96F81 1524 aa31.65■■■□□ 2.66
MMP19-208ENST00000552763 TNIKQ9UKE5 1360 aa31.6■■■□□ 2.65
MMP19-208ENST00000552763 PTPRGP23470 1445 aa31.58■■■□□ 2.65
MMP19-208ENST00000552763 TTBK1Q5TCY1 1321 aaPredicted RBP31.57■■■□□ 2.64
MMP19-208ENST00000552763 KIAA0556O60303 1618 aa31.53■■■□□ 2.64
MMP19-208ENST00000552763 RANGAP1P46060 587 aaPredicted RBP31.52■■■□□ 2.64
MMP19-208ENST00000552763 P3H3Q8IVL6 736 aa31.47■■■□□ 2.63
MMP19-208ENST00000552763 SAMD9Q5K651 1589 aa31.39■■■□□ 2.61
MMP19-208ENST00000552763 UACAQ9BZF9 1416 aa31.35■■■□□ 2.61
MMP19-208ENST00000552763 NPM1P06748 294 aaKnown RBP eCLIP31.34■■■□□ 2.61
MMP19-208ENST00000552763 ADCY10Q96PN6 1610 aa31.32■■■□□ 2.6
MMP19-208ENST00000552763 EFCAB5A4FU69 1503 aa31.29■■■□□ 2.6
MMP19-208ENST00000552763 UHRF1BP1LA0JNW5 1464 aa31.29■■■□□ 2.6
MMP19-208ENST00000552763 LOC105371045A0A1W2PR82 267 aa31.28■■■□□ 2.6
MMP19-208ENST00000552763 FHOD3Q2V2M9 1422 aa31.27■■■□□ 2.6
MMP19-208ENST00000552763 PLB1Q6P1J6 1458 aa31.26■■■□□ 2.59
MMP19-208ENST00000552763 ABCC2Q92887 1545 aa31.24■■■□□ 2.59
MMP19-208ENST00000552763 ARHGAP35Q9NRY4 1499 aa31.22■■■□□ 2.59
MMP19-208ENST00000552763 TRHP20396 242 aaPredicted RBP31.2■■■□□ 2.59
MMP19-208ENST00000552763 ABCA8O94911 1581 aa31.19■■■□□ 2.58
MMP19-208ENST00000552763 KDM5BQ9UGL1 1544 aa31.14■■■□□ 2.57
MMP19-208ENST00000552763 CLIP1P30622 1438 aa31.12■■■□□ 2.57
MMP19-208ENST00000552763 MAPKBP1O60336 1514 aa31.09■■■□□ 2.57
MMP19-208ENST00000552763 FMN1Q68DA7 1419 aa31.06■■■□□ 2.56
MMP19-208ENST00000552763 RAPGEF6Q8TEU7 1601 aa31.05■■■□□ 2.56
MMP19-208ENST00000552763 ARID3CA6NKF2 412 aa31.04■■■□□ 2.56
MMP19-208ENST00000552763 CEP162Q5TB80 1403 aa31.02■■■□□ 2.56
MMP19-208ENST00000552763 ASXL2Q76L83 1435 aa31.02■■■□□ 2.56
MMP19-208ENST00000552763 ZCCHC11Q5TAX3 1644 aaKnown RBP31.02■■■□□ 2.56
MMP19-208ENST00000552763 ATP10BO94823 1461 aa31■■■□□ 2.55
MMP19-208ENST00000552763 NUP153P49790 1475 aaKnown RBP30.98■■■□□ 2.55
MMP19-208ENST00000552763 ABCC10Q5T3U5 1492 aa30.97■■■□□ 2.55
MMP19-208ENST00000552763 FAM69CQ0P6D2 419 aa30.97■■■□□ 2.55
MMP19-208ENST00000552763 ATP1B4Q9UN42 357 aaPredicted RBP30.95■■■□□ 2.55
MMP19-208ENST00000552763 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.94■■■□□ 2.54
MMP19-208ENST00000552763 HNRNPUL2Q1KMD3 747 aaKnown RBP30.94■■■□□ 2.54
MMP19-208ENST00000552763 WDR7Q9Y4E6 1490 aa30.87■■■□□ 2.53
MMP19-208ENST00000552763 DIP2BQ9P265 1576 aa30.87■■■□□ 2.53
MMP19-208ENST00000552763 KCNH8Q96L42 1107 aa30.85■■■□□ 2.53
MMP19-208ENST00000552763 CASKIN1Q8WXD9 1431 aa30.84■■■□□ 2.53
MMP19-208ENST00000552763 KIF13AQ9H1H9 1805 aa30.84■■■□□ 2.53
MMP19-208ENST00000552763 EPRSP07814 1512 aaKnown RBP30.83■■■□□ 2.53
MMP19-208ENST00000552763 HECW1Q76N89 1606 aa30.81■■■□□ 2.52
MMP19-208ENST00000552763 PLEKHD1A6NEE1 506 aa30.8■■■□□ 2.52
MMP19-208ENST00000552763 CDK13Q14004 1512 aaKnown RBP30.78■■■□□ 2.52
MMP19-208ENST00000552763 GLI2P10070 1586 aa30.77■■■□□ 2.52
MMP19-208ENST00000552763 PCF11O94913 1555 aaKnown RBP30.75■■■□□ 2.51
MMP19-208ENST00000552763 FYCO1Q9BQS8 1478 aa30.74■■■□□ 2.51
MMP19-208ENST00000552763 CDK11AQ9UQ88 783 aaPredicted RBP30.72■■■□□ 2.51
MMP19-208ENST00000552763 CCDC18Q5T9S5 1454 aa30.67■■■□□ 2.5
MMP19-208ENST00000552763 LRRIQ1Q96JM4 1722 aa30.64■■■□□ 2.5
MMP19-208ENST00000552763 VPS8Q8N3P4 1428 aa30.63■■■□□ 2.49
MMP19-208ENST00000552763 CD109Q6YHK3 1445 aa30.61■■■□□ 2.49
MMP19-208ENST00000552763 MAP3K4Q9Y6R4 1608 aa30.6■■■□□ 2.49
MMP19-208ENST00000552763 TSPOAP1O95153 1857 aa30.58■■■□□ 2.49
MMP19-208ENST00000552763 TROQ12816 1431 aaPredicted RBP30.56■■■□□ 2.48
MMP19-208ENST00000552763 CFAP43Q8NDM7 1665 aa30.54■■■□□ 2.48
MMP19-208ENST00000552763 ABCA9Q8IUA7 1624 aa30.53■■■□□ 2.48
MMP19-208ENST00000552763 PPRC1Q5VV67 1664 aaKnown RBP30.5■■■□□ 2.47
MMP19-208ENST00000552763 MAGI3Q5TCQ9 1506 aa30.5■■■□□ 2.47
MMP19-208ENST00000552763 TEX14Q8IWB6 1497 aa30.49■■■□□ 2.47
MMP19-208ENST00000552763 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.48■■■□□ 2.47
MMP19-208ENST00000552763 MTUS2Q5JR59 1369 aa30.41■■■□□ 2.46
MMP19-208ENST00000552763 TTC37Q6PGP7 1564 aa30.41■■■□□ 2.46
MMP19-208ENST00000552763 KIF14Q15058 1648 aa30.4■■■□□ 2.46
MMP19-208ENST00000552763 PLCH2O75038 1416 aa30.36■■■□□ 2.45
MMP19-208ENST00000552763 TIAM1Q13009 1591 aa30.35■■■□□ 2.45
MMP19-208ENST00000552763 APLP2Q06481 763 aa30.34■■■□□ 2.45
MMP19-208ENST00000552763 PHLDB1Q86UU1 1377 aa30.33■■■□□ 2.45
MMP19-208ENST00000552763 MAP3K1Q13233 1512 aa30.32■■■□□ 2.44
MMP19-208ENST00000552763 KDM6BO15054 1643 aa30.32■■■□□ 2.44
MMP19-208ENST00000552763 COL17A1Q9UMD9 1497 aaPredicted RBP30.31■■■□□ 2.44
MMP19-208ENST00000552763 NEO1Q92859 1461 aa30.31■■■□□ 2.44
MMP19-208ENST00000552763 EHBP1L1Q8N3D4 1523 aa30.29■■■□□ 2.44
MMP19-208ENST00000552763 KANK4Q5T7N3 995 aaPredicted RBP30.29■■■□□ 2.44
MMP19-208ENST00000552763 EFCAB2Q5VUJ9 269 aa30.29■■■□□ 2.44
MMP19-208ENST00000552763 FANCAO15360 1455 aa30.28■■■□□ 2.44
MMP19-208ENST00000552763 LRRC9Q6ZRR7 1453 aa30.26■■■□□ 2.44
MMP19-208ENST00000552763 AKNAQ7Z591 1439 aa30.25■■■□□ 2.43
MMP19-208ENST00000552763 ARAP3Q8WWN8 1544 aa30.24■■■□□ 2.43
MMP19-208ENST00000552763 MYO5CQ9NQX4 1742 aa30.23■■■□□ 2.43
MMP19-208ENST00000552763 CCNB3Q8WWL7 1395 aa30.21■■■□□ 2.43
MMP19-208ENST00000552763 GPATCH8Q9UKJ3 1502 aaKnown RBP30.2■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms