RNA–Protein interactions for RNA: ENST00000552744.5

SYT1-212, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-212ENST00000552744 HIRIP3Q9BW71 556 aaPredicted RBP11.2□□□□□ -0.62
SYT1-212ENST00000552744 FKBP8Q14318 412 aa11.19□□□□□ -0.62
SYT1-212ENST00000552744 PRDM2Q13029 1718 aa11.19□□□□□ -0.62
SYT1-212ENST00000552744 ERCC6Q03468 1493 aa11.17□□□□□ -0.62
SYT1-212ENST00000552744 ARAP1Q96P48 1450 aa11.17□□□□□ -0.62
SYT1-212ENST00000552744 NCBP3Q53F19 620 aaKnown RBP11.16□□□□□ -0.62
SYT1-212ENST00000552744 CCNB3Q8WWL7 1395 aa11.15□□□□□ -0.62
SYT1-212ENST00000552744 SIN3AQ96ST3 1273 aa11.15□□□□□ -0.62
SYT1-212ENST00000552744 ANP32EQ9BTT0 268 aa11.15□□□□□ -0.62
SYT1-212ENST00000552744 DNAJC5Q9H3Z4 198 aa11.15□□□□□ -0.62
SYT1-212ENST00000552744 ATP1B4Q9UN42 357 aaPredicted RBP11.15□□□□□ -0.62
SYT1-212ENST00000552744 TRIM52Q96A61 297 aa11.14□□□□□ -0.63
SYT1-212ENST00000552744 FAM50AQ14320 339 aaKnown RBP11.14□□□□□ -0.63
SYT1-212ENST00000552744 KIF21AQ7Z4S6 1674 aa11.13□□□□□ -0.63
SYT1-212ENST00000552744 RAB3GAP2Q9H2M9 1393 aa11.12□□□□□ -0.63
SYT1-212ENST00000552744 RRBP1Q9P2E9 1410 aaKnown RBP11.11□□□□□ -0.63
SYT1-212ENST00000552744 TOP2BQ02880 1626 aa11.11□□□□□ -0.63
SYT1-212ENST00000552744 PRXQ9BXM0 1461 aa11.1□□□□□ -0.63
SYT1-212ENST00000552744 PDS5BQ9NTI5 1447 aa11.1□□□□□ -0.63
SYT1-212ENST00000552744 NEFLP07196 543 aa11.09□□□□□ -0.63
SYT1-212ENST00000552744 P3H3Q8IVL6 736 aa11.09□□□□□ -0.63
SYT1-212ENST00000552744 WDR62O43379 1518 aa11.09□□□□□ -0.63
SYT1-212ENST00000552744 SLC24A1O60721 1099 aa11.08□□□□□ -0.64
SYT1-212ENST00000552744 RTN4Q9NQC3 1192 aaKnown RBP11.08□□□□□ -0.64
SYT1-212ENST00000552744 ERICH3Q5RHP9 1530 aa11.06□□□□□ -0.64
SYT1-212ENST00000552744 KIF27Q86VH2 1401 aa11.06□□□□□ -0.64
SYT1-212ENST00000552744 ARHGAP35Q9NRY4 1499 aa11.05□□□□□ -0.64
SYT1-212ENST00000552744 PRKCSHP14314 528 aaPredicted RBP11.04□□□□□ -0.64
SYT1-212ENST00000552744 MRC2Q9UBG0 1479 aa11.04□□□□□ -0.64
SYT1-212ENST00000552744 WDR97A6NE52 1622 aa11.04□□□□□ -0.64
SYT1-212ENST00000552744 ANP32CO43423 234 aa11.03□□□□□ -0.64
SYT1-212ENST00000552744 RBM19Q9Y4C8 960 aaKnown RBP11.03□□□□□ -0.64
SYT1-212ENST00000552744 MAPKBP1O60336 1514 aa11.03□□□□□ -0.64
SYT1-212ENST00000552744 SETD5Q9C0A6 1442 aa11.02□□□□□ -0.64
SYT1-212ENST00000552744 CUX1P39880 1505 aa11.01□□□□□ -0.65
SYT1-212ENST00000552744 BIVM-ERCC5R4GMW8 1640 aa11.01□□□□□ -0.65
SYT1-212ENST00000552744 PPP1R15AO75807 674 aaPredicted RBP11□□□□□ -0.65
SYT1-212ENST00000552744 IRX6P78412 446 aaPredicted RBP11□□□□□ -0.65
SYT1-212ENST00000552744 BCL11AQ9H165 835 aa11□□□□□ -0.65
SYT1-212ENST00000552744 NESP48681 1621 aa11□□□□□ -0.65
SYT1-212ENST00000552744 PHLDB1Q86UU1 1377 aa10.99□□□□□ -0.65
SYT1-212ENST00000552744 CADPSQ9ULU8 1353 aa10.99□□□□□ -0.65
SYT1-212ENST00000552744 HNRNPUQ00839 825 aaKnown RBP eCLIP10.94□□□□□ -0.66
SYT1-212ENST00000552744 CFTRP13569 1480 aa10.94□□□□□ -0.66
SYT1-212ENST00000552744 TIAM1Q13009 1591 aa10.94□□□□□ -0.66
SYT1-212ENST00000552744 IGF1RP08069 1367 aa10.93□□□□□ -0.66
SYT1-212ENST00000552744 LRRC9Q6ZRR7 1453 aa10.93□□□□□ -0.66
SYT1-212ENST00000552744 TONSLQ96HA7 1378 aa10.93□□□□□ -0.66
SYT1-212ENST00000552744 CCER2I3L3R5 266 aa10.93□□□□□ -0.66
SYT1-212ENST00000552744 CARMIL1Q5VZK9 1371 aa10.92□□□□□ -0.66
SYT1-212ENST00000552744 MSH5O43196 834 aa10.89□□□□□ -0.67
SYT1-212ENST00000552744 ERICH6Q7L0X2 663 aa10.89□□□□□ -0.67
SYT1-212ENST00000552744 TIMELESSQ9UNS1 1208 aa10.88□□□□□ -0.67
SYT1-212ENST00000552744 FHOD3Q2V2M9 1422 aa10.87□□□□□ -0.67
SYT1-212ENST00000552744 CNKSR2Q8WXI2 1034 aa10.87□□□□□ -0.67
SYT1-212ENST00000552744 CDK11AQ9UQ88 783 aaPredicted RBP10.87□□□□□ -0.67
SYT1-212ENST00000552744 FANCD2Q9BXW9 1451 aa10.86□□□□□ -0.67
SYT1-212ENST00000552744 CNGB1Q14028 1251 aaPredicted RBP10.86□□□□□ -0.67
SYT1-212ENST00000552744 FHAD1B1AJZ9 1412 aa10.85□□□□□ -0.67
SYT1-212ENST00000552744 PCF11O94913 1555 aaKnown RBP10.83□□□□□ -0.68
SYT1-212ENST00000552744 FAM9BQ8IZU0 186 aa10.83□□□□□ -0.68
SYT1-212ENST00000552744 CHIC2Q9UKJ5 165 aa10.83□□□□□ -0.68
SYT1-212ENST00000552744 FOXD4L1Q9NU39 408 aa10.82□□□□□ -0.68
SYT1-212ENST00000552744 MAP3K1Q13233 1512 aa10.82□□□□□ -0.68
SYT1-212ENST00000552744 FGD5Q6ZNL6 1462 aa10.81□□□□□ -0.68
SYT1-212ENST00000552744 CCDC184Q52MB2 194 aa10.81□□□□□ -0.68
SYT1-212ENST00000552744 RRP7BPQ9NSQ0 103 aa10.81□□□□□ -0.68
SYT1-212ENST00000552744 MTUS2Q5JR59 1369 aa10.8□□□□□ -0.68
SYT1-212ENST00000552744 HSPA5P11021 654 aaKnown RBP10.8□□□□□ -0.68
SYT1-212ENST00000552744 CCDC18Q5T9S5 1454 aa10.8□□□□□ -0.68
SYT1-212ENST00000552744 B4GALNT3Q6L9W6 998 aa10.79□□□□□ -0.68
SYT1-212ENST00000552744 IFT140Q96RY7 1462 aa10.79□□□□□ -0.68
SYT1-212ENST00000552744 SENP3-EIF4A1A0A087X0R7 540 aa10.78□□□□□ -0.68
SYT1-212ENST00000552744 DNMBPQ6XZF7 1577 aa10.78□□□□□ -0.68
SYT1-212ENST00000552744 WASHC2AQ641Q2 1341 aa10.78□□□□□ -0.68
SYT1-212ENST00000552744 URB2Q14146 1524 aaKnown RBP10.77□□□□□ -0.68
SYT1-212ENST00000552744 PTPRKQ15262 1439 aa10.77□□□□□ -0.69
SYT1-212ENST00000552744 FGD6Q6ZV73 1430 aa10.77□□□□□ -0.69
SYT1-212ENST00000552744 ARID3CA6NKF2 412 aa10.76□□□□□ -0.69
SYT1-212ENST00000552744 MAPK8IP2Q13387 824 aaPredicted RBP10.76□□□□□ -0.69
SYT1-212ENST00000552744 AMER1Q5JTC6 1135 aaPredicted RBP10.76□□□□□ -0.69
SYT1-212ENST00000552744 MRS2Q9HD23 443 aa10.75□□□□□ -0.69
SYT1-212ENST00000552744 RAD54L2Q9Y4B4 1467 aa10.75□□□□□ -0.69
SYT1-212ENST00000552744 CFAP43Q8NDM7 1665 aa10.75□□□□□ -0.69
SYT1-212ENST00000552744 FANCIQ9NVI1 1328 aa10.75□□□□□ -0.69
SYT1-212ENST00000552744 UACAQ9BZF9 1416 aa10.75□□□□□ -0.69
SYT1-212ENST00000552744 EIF4G2P78344 907 aaKnown RBP eCLIP10.74□□□□□ -0.69
SYT1-212ENST00000552744 AQRO60306 1485 aaKnown RBP eCLIP10.74□□□□□ -0.69
SYT1-212ENST00000552744 POLR3GLQ9BT43 218 aa10.74□□□□□ -0.69
SYT1-212ENST00000552744 PPP4R2Q9NY27 417 aa10.74□□□□□ -0.69
SYT1-212ENST00000552744 FYCO1Q9BQS8 1478 aa10.73□□□□□ -0.69
SYT1-212ENST00000552744 CASKIN1Q8WXD9 1431 aa10.73□□□□□ -0.69
SYT1-212ENST00000552744 C11orf95C9JLR9 678 aaPredicted RBP10.72□□□□□ -0.69
SYT1-212ENST00000552744 HFM1A2PYH4 1435 aa10.72□□□□□ -0.69
SYT1-212ENST00000552744 NBR1Q14596 966 aa10.71□□□□□ -0.69
SYT1-212ENST00000552744 NAIPQ13075 1403 aa10.71□□□□□ -0.69
SYT1-212ENST00000552744 L3MBTL2Q969R5 705 aa10.7□□□□□ -0.7
SYT1-212ENST00000552744 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.7□□□□□ -0.7
SYT1-212ENST00000552744 TARBP1Q13395 1621 aaKnown RBP10.7□□□□□ -0.7
SYT1-212ENST00000552744 PRKRIP1Q9H875 184 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms