RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 CTTNBP2Q8WZ74 1663 aa15.43■□□□□ 0.06
CCDC59-207ENST00000552606 OSCARQ8IYS5 282 aa15.41■□□□□ 0.06
CCDC59-207ENST00000552606 CHMP7Q8WUX9 453 aaPredicted RBP15.41■□□□□ 0.06
CCDC59-207ENST00000552606 PRXQ9BXM0 1461 aa15.4■□□□□ 0.06
CCDC59-207ENST00000552606 CARMIL1Q5VZK9 1371 aa15.4■□□□□ 0.06
CCDC59-207ENST00000552606 DNAJC5Q9H3Z4 198 aa15.4■□□□□ 0.06
CCDC59-207ENST00000552606 FBLN2P98095 1184 aa15.39■□□□□ 0.05
CCDC59-207ENST00000552606 RAPGEF2Q9Y4G8 1499 aa15.39■□□□□ 0.05
CCDC59-207ENST00000552606 RIMBP3CA6NJZ7 1639 aa15.39■□□□□ 0.05
CCDC59-207ENST00000552606 RIMBP3BA6NNM3 1639 aa15.39■□□□□ 0.05
CCDC59-207ENST00000552606 KIF21BO75037 1637 aa15.39■□□□□ 0.05
CCDC59-207ENST00000552606 RIMBP3Q9UFD9 1639 aa15.39■□□□□ 0.05
CCDC59-207ENST00000552606 ARHGEF11O15085 1522 aa15.35■□□□□ 0.05
CCDC59-207ENST00000552606 IQGAP2Q13576 1575 aa15.33■□□□□ 0.05
CCDC59-207ENST00000552606 KIAA0586Q9BVV6 1533 aa15.32■□□□□ 0.04
CCDC59-207ENST00000552606 ERCC6L2Q5T890 1561 aa15.3■□□□□ 0.04
CCDC59-207ENST00000552606 MAPK8IP2Q13387 824 aaPredicted RBP15.29■□□□□ 0.04
CCDC59-207ENST00000552606 DMRT2Q9Y5R5 561 aa15.28■□□□□ 0.04
CCDC59-207ENST00000552606 CSRNP3Q8WYN3 585 aa15.27■□□□□ 0.04
CCDC59-207ENST00000552606 ARAP1Q96P48 1450 aa15.24■□□□□ 0.03
CCDC59-207ENST00000552606 UGGT2Q9NYU1 1516 aa15.23■□□□□ 0.03
CCDC59-207ENST00000552606 FAM9AQ8IZU1 332 aaPredicted RBP15.21■□□□□ 0.03
CCDC59-207ENST00000552606 KIAA0556O60303 1618 aa15.21■□□□□ 0.02
CCDC59-207ENST00000552606 GOLGA3Q08378 1498 aa15.2■□□□□ 0.02
CCDC59-207ENST00000552606 PRG4Q92954 1404 aaPredicted RBP15.18■□□□□ 0.02
CCDC59-207ENST00000552606 DISP1Q96F81 1524 aa15.18■□□□□ 0.02
CCDC59-207ENST00000552606 SAMD9Q5K651 1589 aa15.18■□□□□ 0.02
CCDC59-207ENST00000552606 CACNB1Q02641 598 aaPredicted RBP15.14■□□□□ 0.01
CCDC59-207ENST00000552606 JPH4Q96JJ6 628 aa15.14■□□□□ 0.01
CCDC59-207ENST00000552606 SCAF1Q9H7N4 1312 aaKnown RBP15.11■□□□□ 0.01
CCDC59-207ENST00000552606 EFCAB5A4FU69 1503 aa15.09■□□□□ 0.01
CCDC59-207ENST00000552606 CARMIL2Q6F5E8 1435 aa15.09■□□□□ 0.01
CCDC59-207ENST00000552606 ADCY10Q96PN6 1610 aa15.08■□□□□ 0
CCDC59-207ENST00000552606 TNIKQ9UKE5 1360 aa15.03■□□□□ -0
CCDC59-207ENST00000552606 ABCA8O94911 1581 aa15.01□□□□□ -0.01
CCDC59-207ENST00000552606 CYB5RLQ6IPT4 315 aa15□□□□□ -0.01
CCDC59-207ENST00000552606 ABCC2Q92887 1545 aa15□□□□□ -0.01
CCDC59-207ENST00000552606 ARHGAP35Q9NRY4 1499 aa15□□□□□ -0.01
CCDC59-207ENST00000552606 UHRF1BP1LA0JNW5 1464 aa14.98□□□□□ -0.01
CCDC59-207ENST00000552606 PTPRGP23470 1445 aa14.98□□□□□ -0.01
CCDC59-207ENST00000552606 RAPGEF6Q8TEU7 1601 aa14.97□□□□□ -0.01
CCDC59-207ENST00000552606 EHMT2Q96KQ7 1210 aa14.97□□□□□ -0.01
CCDC59-207ENST00000552606 FHOD3Q2V2M9 1422 aa14.97□□□□□ -0.01
CCDC59-207ENST00000552606 UBTFP17480 764 aaKnown RBP14.96□□□□□ -0.01
CCDC59-207ENST00000552606 ZCCHC11Q5TAX3 1644 aaKnown RBP14.95□□□□□ -0.02
CCDC59-207ENST00000552606 PLB1Q6P1J6 1458 aa14.95□□□□□ -0.02
CCDC59-207ENST00000552606 UACAQ9BZF9 1416 aa14.93□□□□□ -0.02
CCDC59-207ENST00000552606 LRRIQ1Q96JM4 1722 aa14.93□□□□□ -0.02
CCDC59-207ENST00000552606 MAPKBP1O60336 1514 aa14.92□□□□□ -0.02
CCDC59-207ENST00000552606 KIF13AQ9H1H9 1805 aa14.92□□□□□ -0.02
CCDC59-207ENST00000552606 KDM5BQ9UGL1 1544 aa14.92□□□□□ -0.02
CCDC59-207ENST00000552606 PCF11O94913 1555 aaKnown RBP14.9□□□□□ -0.02
CCDC59-207ENST00000552606 CLIP1P30622 1438 aa14.89□□□□□ -0.03
CCDC59-207ENST00000552606 CEP162Q5TB80 1403 aa14.89□□□□□ -0.03
CCDC59-207ENST00000552606 HECW1Q76N89 1606 aa14.88□□□□□ -0.03
CCDC59-207ENST00000552606 NUP153P49790 1475 aaKnown RBP14.87□□□□□ -0.03
CCDC59-207ENST00000552606 RANGAP1P46060 587 aaPredicted RBP14.86□□□□□ -0.03
CCDC59-207ENST00000552606 P3H3Q8IVL6 736 aa14.86□□□□□ -0.03
CCDC59-207ENST00000552606 DIP2BQ9P265 1576 aa14.85□□□□□ -0.03
CCDC59-207ENST00000552606 FMN1Q68DA7 1419 aa14.84□□□□□ -0.03
CCDC59-207ENST00000552606 TTBK1Q5TCY1 1321 aaPredicted RBP14.84□□□□□ -0.03
CCDC59-207ENST00000552606 LOC105371045A0A1W2PR82 267 aa14.83□□□□□ -0.04
CCDC59-207ENST00000552606 DCAF8L1A6NGE4 600 aa14.8□□□□□ -0.04
CCDC59-207ENST00000552606 FYCO1Q9BQS8 1478 aa14.8□□□□□ -0.04
CCDC59-207ENST00000552606 ATP10BO94823 1461 aa14.79□□□□□ -0.04
CCDC59-207ENST00000552606 CDK13Q14004 1512 aaKnown RBP14.78□□□□□ -0.04
CCDC59-207ENST00000552606 ASXL2Q76L83 1435 aa14.78□□□□□ -0.04
CCDC59-207ENST00000552606 ABCC10Q5T3U5 1492 aa14.77□□□□□ -0.04
CCDC59-207ENST00000552606 CASKIN1Q8WXD9 1431 aa14.77□□□□□ -0.04
CCDC59-207ENST00000552606 CFAP43Q8NDM7 1665 aa14.77□□□□□ -0.05
CCDC59-207ENST00000552606 GLI2P10070 1586 aa14.77□□□□□ -0.05
CCDC59-207ENST00000552606 EPRSP07814 1512 aaKnown RBP14.76□□□□□ -0.05
CCDC59-207ENST00000552606 WDR7Q9Y4E6 1490 aa14.76□□□□□ -0.05
CCDC59-207ENST00000552606 MAP3K4Q9Y6R4 1608 aa14.76□□□□□ -0.05
CCDC59-207ENST00000552606 PPRC1Q5VV67 1664 aaKnown RBP14.75□□□□□ -0.05
CCDC59-207ENST00000552606 CCDC18Q5T9S5 1454 aa14.73□□□□□ -0.05
CCDC59-207ENST00000552606 ABCA9Q8IUA7 1624 aa14.72□□□□□ -0.05
CCDC59-207ENST00000552606 TSPOAP1O95153 1857 aa14.72□□□□□ -0.05
CCDC59-207ENST00000552606 NPM1P06748 294 aaKnown RBP eCLIP14.71□□□□□ -0.05
CCDC59-207ENST00000552606 VPS8Q8N3P4 1428 aa14.71□□□□□ -0.05
CCDC59-207ENST00000552606 MAGI3Q5TCQ9 1506 aa14.69□□□□□ -0.06
CCDC59-207ENST00000552606 KIF14Q15058 1648 aa14.68□□□□□ -0.06
CCDC59-207ENST00000552606 TTC37Q6PGP7 1564 aa14.68□□□□□ -0.06
CCDC59-207ENST00000552606 TIAM1Q13009 1591 aa14.66□□□□□ -0.06
CCDC59-207ENST00000552606 ARID3CA6NKF2 412 aa14.65□□□□□ -0.06
CCDC59-207ENST00000552606 MYO5CQ9NQX4 1742 aa14.64□□□□□ -0.07
CCDC59-207ENST00000552606 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.64□□□□□ -0.07
CCDC59-207ENST00000552606 TROQ12816 1431 aaPredicted RBP14.62□□□□□ -0.07
CCDC59-207ENST00000552606 MAP3K1Q13233 1512 aa14.61□□□□□ -0.07
CCDC59-207ENST00000552606 EHBP1L1Q8N3D4 1523 aa14.61□□□□□ -0.07
CCDC59-207ENST00000552606 CDC42BPAQ5VT25 1732 aa14.61□□□□□ -0.07
CCDC59-207ENST00000552606 RNF39Q9H2S5 420 aa14.61□□□□□ -0.07
CCDC59-207ENST00000552606 TRHP20396 242 aaPredicted RBP14.6□□□□□ -0.07
CCDC59-207ENST00000552606 PREX2Q70Z35 1606 aa14.59□□□□□ -0.07
CCDC59-207ENST00000552606 CDC42BPBQ9Y5S2 1711 aa14.59□□□□□ -0.07
CCDC59-207ENST00000552606 FAM69CQ0P6D2 419 aa14.58□□□□□ -0.08
CCDC59-207ENST00000552606 CFAP74Q9C0B2 1584 aa14.57□□□□□ -0.08
CCDC59-207ENST00000552606 SUPT6HQ7KZ85 1726 aaKnown RBP14.57□□□□□ -0.08
CCDC59-207ENST00000552606 ARAP3Q8WWN8 1544 aa14.56□□□□□ -0.08
CCDC59-207ENST00000552606 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms