RNA–Protein interactions for RNA: ENST00000552352.1

RPH3A-223, Transcript of rabphilin 3A, human

TSL 3

Gene RPH3A, Length 2,535 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPH3A-223	ENST00000552352	CUL7	Q14999	1698 aa		11.85	□□□□□ -0.51
RPH3A-223	ENST00000552352	URB2	Q14146	1524 aa	Known RBP	11.85	□□□□□ -0.51
RPH3A-223	ENST00000552352	ARAP1	Q96P48	1450 aa		11.85	□□□□□ -0.51
RPH3A-223	ENST00000552352	CARMIL1	Q5VZK9	1371 aa		11.82	□□□□□ -0.52
RPH3A-223	ENST00000552352	ABCA5	Q8WWZ7	1642 aa		11.81	□□□□□ -0.52
RPH3A-223	ENST00000552352	CLSPN	Q9HAW4	1339 aa		11.8	□□□□□ -0.52
RPH3A-223	ENST00000552352	ARHGAP35	Q9NRY4	1499 aa		11.79	□□□□□ -0.52
RPH3A-223	ENST00000552352	KIF21A	Q7Z4S6	1674 aa		11.79	□□□□□ -0.52
RPH3A-223	ENST00000552352	RAD54L2	Q9Y4B4	1467 aa		11.78	□□□□□ -0.52
RPH3A-223	ENST00000552352	MAP3K1	Q13233	1512 aa		11.78	□□□□□ -0.52
RPH3A-223	ENST00000552352	HNRNPUL2	Q1KMD3	747 aa	Known RBP	11.76	□□□□□ -0.53
RPH3A-223	ENST00000552352	TARBP1	Q13395	1621 aa	Known RBP	11.75	□□□□□ -0.53
RPH3A-223	ENST00000552352	EFCAB5	A4FU69	1503 aa		11.75	□□□□□ -0.53
RPH3A-223	ENST00000552352	MRC2	Q9UBG0	1479 aa		11.74	□□□□□ -0.53
RPH3A-223	ENST00000552352	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.74	□□□□□ -0.53
RPH3A-223	ENST00000552352	CTTNBP2	Q8WZ74	1663 aa		11.72	□□□□□ -0.53
RPH3A-223	ENST00000552352	APLP2	Q06481	763 aa		11.71	□□□□□ -0.53
RPH3A-223	ENST00000552352	GAPVD1	Q14C86	1478 aa		11.71	□□□□□ -0.54
RPH3A-223	ENST00000552352	DNAJC5B	Q9UF47	199 aa		11.69	□□□□□ -0.54
RPH3A-223	ENST00000552352	WDR62	O43379	1518 aa		11.69	□□□□□ -0.54
RPH3A-223	ENST00000552352	FHAD1	B1AJZ9	1412 aa		11.69	□□□□□ -0.54
RPH3A-223	ENST00000552352	AQR	O60306	1485 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
RPH3A-223	ENST00000552352	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.68	□□□□□ -0.54
RPH3A-223	ENST00000552352	TIAM1	Q13009	1591 aa		11.66	□□□□□ -0.54
RPH3A-223	ENST00000552352	RRBP1	Q9P2E9	1410 aa	Known RBP	11.66	□□□□□ -0.54
RPH3A-223	ENST00000552352	CFAP43	Q8NDM7	1665 aa		11.65	□□□□□ -0.54
RPH3A-223	ENST00000552352	IFT140	Q96RY7	1462 aa		11.65	□□□□□ -0.54
RPH3A-223	ENST00000552352	PBRM1	Q86U86	1689 aa		11.65	□□□□□ -0.55
RPH3A-223	ENST00000552352	SAMD9	Q5K651	1589 aa		11.65	□□□□□ -0.55
RPH3A-223	ENST00000552352	FYCO1	Q9BQS8	1478 aa		11.64	□□□□□ -0.55
RPH3A-223	ENST00000552352	DHX57	Q6P158	1386 aa	Known RBP	11.63	□□□□□ -0.55
RPH3A-223	ENST00000552352	ADAMTS12	P58397	1594 aa		11.62	□□□□□ -0.55
RPH3A-223	ENST00000552352	TDRD9	Q8NDG6	1382 aa	Known RBP	11.62	□□□□□ -0.55
RPH3A-223	ENST00000552352	CASKIN1	Q8WXD9	1431 aa		11.61	□□□□□ -0.55
RPH3A-223	ENST00000552352	GRIN2B	Q13224	1484 aa		11.61	□□□□□ -0.55
RPH3A-223	ENST00000552352	PCF11	O94913	1555 aa	Known RBP	11.61	□□□□□ -0.55
RPH3A-223	ENST00000552352	THOC2	Q8NI27	1593 aa	Known RBP	11.61	□□□□□ -0.55
RPH3A-223	ENST00000552352	FMN1	Q68DA7	1419 aa		11.6	□□□□□ -0.55
RPH3A-223	ENST00000552352	TSHZ2	Q9NRE2	1034 aa		11.59	□□□□□ -0.55
RPH3A-223	ENST00000552352	LRRC9	Q6ZRR7	1453 aa		11.58	□□□□□ -0.56
RPH3A-223	ENST00000552352	RANGAP1	P46060	587 aa	Predicted RBP	11.57	□□□□□ -0.56
RPH3A-223	ENST00000552352	ANP32E	Q9BTT0	268 aa		11.57	□□□□□ -0.56
RPH3A-223	ENST00000552352	KANK4	Q5T7N3	995 aa	Predicted RBP	11.56	□□□□□ -0.56
RPH3A-223	ENST00000552352	SNAPC4	Q5SXM2	1469 aa		11.56	□□□□□ -0.56
RPH3A-223	ENST00000552352	FHOD3	Q2V2M9	1422 aa		11.54	□□□□□ -0.56
RPH3A-223	ENST00000552352	CCNB3	Q8WWL7	1395 aa		11.54	□□□□□ -0.56
RPH3A-223	ENST00000552352	IQGAP2	Q13576	1575 aa		11.53	□□□□□ -0.56
RPH3A-223	ENST00000552352	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.52	□□□□□ -0.56
RPH3A-223	ENST00000552352	KCNA4	P22459	653 aa		11.52	□□□□□ -0.56
RPH3A-223	ENST00000552352	UGGT2	Q9NYU1	1516 aa		11.52	□□□□□ -0.57
RPH3A-223	ENST00000552352	EIF4G3	O43432	1585 aa	Known RBP	11.51	□□□□□ -0.57
RPH3A-223	ENST00000552352	ERCC6	Q03468	1493 aa		11.5	□□□□□ -0.57
RPH3A-223	ENST00000552352	MAGI1	Q96QZ7	1491 aa	Predicted RBP	11.5	□□□□□ -0.57
RPH3A-223	ENST00000552352	ZNF608	Q9ULD9	1512 aa	Predicted RBP	11.49	□□□□□ -0.57
RPH3A-223	ENST00000552352	CCDC18	Q5T9S5	1454 aa		11.48	□□□□□ -0.57
RPH3A-223	ENST00000552352	KIAA0586	Q9BVV6	1533 aa		11.48	□□□□□ -0.57
RPH3A-223	ENST00000552352	HECW1	Q76N89	1606 aa		11.46	□□□□□ -0.58
RPH3A-223	ENST00000552352	GRIN2A	Q12879	1464 aa		11.46	□□□□□ -0.58
RPH3A-223	ENST00000552352	EHBP1L1	Q8N3D4	1523 aa		11.45	□□□□□ -0.58
RPH3A-223	ENST00000552352	PHLDB1	Q86UU1	1377 aa		11.45	□□□□□ -0.58
RPH3A-223	ENST00000552352	LRRIQ1	Q96JM4	1722 aa		11.44	□□□□□ -0.58
RPH3A-223	ENST00000552352	ARHGEF11	O15085	1522 aa		11.44	□□□□□ -0.58
RPH3A-223	ENST00000552352	SYNJ2	O15056	1496 aa		11.44	□□□□□ -0.58
RPH3A-223	ENST00000552352	KIAA0556	O60303	1618 aa		11.42	□□□□□ -0.58
RPH3A-223	ENST00000552352	MAPKBP1	O60336	1514 aa		11.41	□□□□□ -0.58
RPH3A-223	ENST00000552352	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.41	□□□□□ -0.58
RPH3A-223	ENST00000552352	P3H3	Q8IVL6	736 aa		11.4	□□□□□ -0.58
RPH3A-223	ENST00000552352	KCNH8	Q96L42	1107 aa		11.4	□□□□□ -0.58
RPH3A-223	ENST00000552352	BCL11A	Q9H165	835 aa		11.4	□□□□□ -0.58
RPH3A-223	ENST00000552352	NUP160	Q12769	1436 aa		11.4	□□□□□ -0.58
RPH3A-223	ENST00000552352	DISP1	Q96F81	1524 aa		11.39	□□□□□ -0.59
RPH3A-223	ENST00000552352	FGD6	Q6ZV73	1430 aa		11.39	□□□□□ -0.59
RPH3A-223	ENST00000552352	PPP4R3CP	Q6ZMV5	832 aa		11.39	□□□□□ -0.59
RPH3A-223	ENST00000552352	MTUS2	Q5JR59	1369 aa		11.37	□□□□□ -0.59
RPH3A-223	ENST00000552352	FKBP8	Q14318	412 aa		11.37	□□□□□ -0.59
RPH3A-223	ENST00000552352	EPRS	P07814	1512 aa	Known RBP	11.37	□□□□□ -0.59
RPH3A-223	ENST00000552352	RAB3GAP2	Q9H2M9	1393 aa		11.37	□□□□□ -0.59
RPH3A-223	ENST00000552352	CEP170	Q5SW79	1584 aa		11.37	□□□□□ -0.59
RPH3A-223	ENST00000552352	MYOM3	Q5VTT5	1437 aa		11.37	□□□□□ -0.59
RPH3A-223	ENST00000552352	BCAN	Q96GW7	911 aa		11.37	□□□□□ -0.59
RPH3A-223	ENST00000552352	NCOA2	Q15596	1464 aa		11.37	□□□□□ -0.59
RPH3A-223	ENST00000552352	SETD5	Q9C0A6	1442 aa		11.36	□□□□□ -0.59
RPH3A-223	ENST00000552352	TCOF1	Q13428	1488 aa	Known RBP	11.36	□□□□□ -0.59
RPH3A-223	ENST00000552352	MAGI3	Q5TCQ9	1506 aa		11.34	□□□□□ -0.59
RPH3A-223	ENST00000552352	NEFL	P07196	543 aa		11.33	□□□□□ -0.6
RPH3A-223	ENST00000552352	RAPGEF6	Q8TEU7	1601 aa		11.33	□□□□□ -0.6
RPH3A-223	ENST00000552352	MIA2	Q96PC5	1412 aa		11.33	□□□□□ -0.6
RPH3A-223	ENST00000552352	RBM19	Q9Y4C8	960 aa	Known RBP	11.33	□□□□□ -0.6
RPH3A-223	ENST00000552352	AKNA	Q7Z591	1439 aa		11.31	□□□□□ -0.6
RPH3A-223	ENST00000552352	PPP1R15A	O75807	674 aa	Predicted RBP	11.31	□□□□□ -0.6
RPH3A-223	ENST00000552352	PTPN23	Q9H3S7	1636 aa		11.3	□□□□□ -0.6
RPH3A-223	ENST00000552352	CCER2	I3L3R5	266 aa		11.3	□□□□□ -0.6
RPH3A-223	ENST00000552352	DDX10	Q13206	875 aa	Known RBP	11.3	□□□□□ -0.6
RPH3A-223	ENST00000552352	NUP153	P49790	1475 aa	Known RBP	11.3	□□□□□ -0.6
RPH3A-223	ENST00000552352	ITGAE	P38570	1179 aa		11.3	□□□□□ -0.6
RPH3A-223	ENST00000552352	HFM1	A2PYH4	1435 aa		11.29	□□□□□ -0.6
RPH3A-223	ENST00000552352	TIMELESS	Q9UNS1	1208 aa		11.29	□□□□□ -0.6
RPH3A-223	ENST00000552352	CARMIL2	Q6F5E8	1435 aa		11.29	□□□□□ -0.6
RPH3A-223	ENST00000552352	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.29	□□□□□ -0.6
RPH3A-223	ENST00000552352	CDK13	Q14004	1512 aa	Known RBP	11.28	□□□□□ -0.6

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