RNA–Protein interactions for RNA: ENST00000552351.5

CHPT1-210, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 1,524 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-210ENST00000552351 CSRNP3Q8WYN3 585 aa45.01■■■■■ 4.8
CHPT1-210ENST00000552351 SHROOM2Q13796 1616 aa44.98■■■■■ 4.79
CHPT1-210ENST00000552351 KIAA0586Q9BVV6 1533 aa44.97■■■■■ 4.79
CHPT1-210ENST00000552351 JPH4Q96JJ6 628 aa44.81■■■■■ 4.76
CHPT1-210ENST00000552351 FAM9AQ8IZU1 332 aaPredicted RBP44.78■■■■■ 4.76
CHPT1-210ENST00000552351 IQGAP2Q13576 1575 aa44.76■■■■■ 4.76
CHPT1-210ENST00000552351 ARAP1Q96P48 1450 aa44.74■■■■■ 4.75
CHPT1-210ENST00000552351 CTTNBP2Q8WZ74 1663 aa44.72■■■■■ 4.75
CHPT1-210ENST00000552351 PRG4Q92954 1404 aaPredicted RBP44.7■■■■■ 4.75
CHPT1-210ENST00000552351 KIF21BO75037 1637 aa44.7■■■■■ 4.75
CHPT1-210ENST00000552351 ERCC6L2Q5T890 1561 aa44.68■■■■■ 4.74
CHPT1-210ENST00000552351 CYB5RLQ6IPT4 315 aa44.59■■■■■ 4.73
CHPT1-210ENST00000552351 UGGT2Q9NYU1 1516 aa44.54■■■■■ 4.72
CHPT1-210ENST00000552351 CARMIL2Q6F5E8 1435 aa44.49■■■■■ 4.71
CHPT1-210ENST00000552351 GOLGA3Q08378 1498 aa44.42■■■■■ 4.7
CHPT1-210ENST00000552351 DISP1Q96F81 1524 aa44.39■■■■■ 4.7
CHPT1-210ENST00000552351 KIAA0556O60303 1618 aa44.32■■■■■ 4.69
CHPT1-210ENST00000552351 TNIKQ9UKE5 1360 aa44.29■■■■■ 4.68
CHPT1-210ENST00000552351 PTPRGP23470 1445 aa44.23■■■■■ 4.67
CHPT1-210ENST00000552351 UBTFP17480 764 aaKnown RBP44.19■■■■■ 4.67
CHPT1-210ENST00000552351 SAMD9Q5K651 1589 aa44.15■■■■■ 4.66
CHPT1-210ENST00000552351 EHMT2Q96KQ7 1210 aa44.09■■■■■ 4.65
CHPT1-210ENST00000552351 EFCAB5A4FU69 1503 aa44.04■■■■■ 4.64
CHPT1-210ENST00000552351 ADCY10Q96PN6 1610 aa44.02■■■■■ 4.64
CHPT1-210ENST00000552351 TTBK1Q5TCY1 1321 aaPredicted RBP43.97■■■■■ 4.63
CHPT1-210ENST00000552351 UACAQ9BZF9 1416 aa43.96■■■■■ 4.63
CHPT1-210ENST00000552351 UHRF1BP1LA0JNW5 1464 aa43.95■■■■■ 4.63
CHPT1-210ENST00000552351 ABCC2Q92887 1545 aa43.9■■■■■ 4.62
CHPT1-210ENST00000552351 RANGAP1P46060 587 aaPredicted RBP43.89■■■■■ 4.62
CHPT1-210ENST00000552351 P3H3Q8IVL6 736 aa43.87■■■■■ 4.61
CHPT1-210ENST00000552351 NPM1P06748 294 aaKnown RBP eCLIP43.85■■■■■ 4.61
CHPT1-210ENST00000552351 ABCA8O94911 1581 aa43.82■■■■■ 4.6
CHPT1-210ENST00000552351 PLB1Q6P1J6 1458 aa43.8■■■■■ 4.6
CHPT1-210ENST00000552351 FHOD3Q2V2M9 1422 aa43.78■■■■■ 4.6
CHPT1-210ENST00000552351 ARHGAP35Q9NRY4 1499 aa43.77■■■■■ 4.6
CHPT1-210ENST00000552351 MAPKBP1O60336 1514 aa43.76■■■■■ 4.6
CHPT1-210ENST00000552351 KDM5BQ9UGL1 1544 aa43.73■■■■■ 4.59
CHPT1-210ENST00000552351 RAPGEF6Q8TEU7 1601 aa43.65■■■■■ 4.58
CHPT1-210ENST00000552351 ZCCHC11Q5TAX3 1644 aaKnown RBP43.61■■■■■ 4.57
CHPT1-210ENST00000552351 FMN1Q68DA7 1419 aa43.6■■■■■ 4.57
CHPT1-210ENST00000552351 CLIP1P30622 1438 aa43.6■■■■■ 4.57
CHPT1-210ENST00000552351 TRHP20396 242 aaPredicted RBP43.58■■■■■ 4.57
CHPT1-210ENST00000552351 LOC105371045A0A1W2PR82 267 aa43.52■■■■■ 4.56
CHPT1-210ENST00000552351 ASXL2Q76L83 1435 aa43.48■■■■■ 4.55
CHPT1-210ENST00000552351 ABCC10Q5T3U5 1492 aa43.47■■■■■ 4.55
CHPT1-210ENST00000552351 NUP153P49790 1475 aaKnown RBP43.46■■■■■ 4.55
CHPT1-210ENST00000552351 CEP162Q5TB80 1403 aa43.45■■■■■ 4.55
CHPT1-210ENST00000552351 KIF13AQ9H1H9 1805 aa43.43■■■■■ 4.54
CHPT1-210ENST00000552351 ATP10BO94823 1461 aa43.43■■■■■ 4.54
CHPT1-210ENST00000552351 DIP2BQ9P265 1576 aa43.42■■■■■ 4.54
CHPT1-210ENST00000552351 HECW1Q76N89 1606 aa43.35■■■■■ 4.53
CHPT1-210ENST00000552351 WDR7Q9Y4E6 1490 aa43.35■■■■■ 4.53
CHPT1-210ENST00000552351 FAM69CQ0P6D2 419 aa43.28■■■■■ 4.52
CHPT1-210ENST00000552351 GLI2P10070 1586 aa43.28■■■■■ 4.52
CHPT1-210ENST00000552351 CASKIN1Q8WXD9 1431 aa43.26■■■■■ 4.52
CHPT1-210ENST00000552351 ARID3CA6NKF2 412 aa43.26■■■■■ 4.52
CHPT1-210ENST00000552351 EPRSP07814 1512 aaKnown RBP43.25■■■■■ 4.51
CHPT1-210ENST00000552351 PCF11O94913 1555 aaKnown RBP43.22■■■■■ 4.51
CHPT1-210ENST00000552351 FYCO1Q9BQS8 1478 aa43.2■■■■■ 4.51
CHPT1-210ENST00000552351 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP43.19■■■■■ 4.5
CHPT1-210ENST00000552351 HNRNPUL2Q1KMD3 747 aaKnown RBP43.19■■■■■ 4.5
CHPT1-210ENST00000552351 ATP1B4Q9UN42 357 aaPredicted RBP43.14■■■■■ 4.5
CHPT1-210ENST00000552351 CDK13Q14004 1512 aaKnown RBP43.14■■■■■ 4.5
CHPT1-210ENST00000552351 CCDC18Q5T9S5 1454 aa43.11■■■■■ 4.49
CHPT1-210ENST00000552351 LRRIQ1Q96JM4 1722 aa43.1■■■■■ 4.49
CHPT1-210ENST00000552351 PLEKHD1A6NEE1 506 aa43.08■■■■■ 4.49
CHPT1-210ENST00000552351 MAP3K4Q9Y6R4 1608 aa43.08■■■■■ 4.49
CHPT1-210ENST00000552351 KCNH8Q96L42 1107 aa43.03■■■■■ 4.48
CHPT1-210ENST00000552351 CFAP43Q8NDM7 1665 aa43.03■■■■■ 4.48
CHPT1-210ENST00000552351 CDK11AQ9UQ88 783 aaPredicted RBP43.02■■■■■ 4.48
CHPT1-210ENST00000552351 TSPOAP1O95153 1857 aa42.99■■■■■ 4.47
CHPT1-210ENST00000552351 ABCA9Q8IUA7 1624 aa42.95■■■■■ 4.47
CHPT1-210ENST00000552351 VPS8Q8N3P4 1428 aa42.95■■■■■ 4.47
CHPT1-210ENST00000552351 PPRC1Q5VV67 1664 aaKnown RBP42.92■■■■■ 4.46
CHPT1-210ENST00000552351 CD109Q6YHK3 1445 aa42.89■■■■■ 4.46
CHPT1-210ENST00000552351 TROQ12816 1431 aaPredicted RBP42.86■■■■■ 4.45
CHPT1-210ENST00000552351 TEX14Q8IWB6 1497 aa42.86■■■■■ 4.45
CHPT1-210ENST00000552351 MAGI3Q5TCQ9 1506 aa42.85■■■■■ 4.45
CHPT1-210ENST00000552351 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP42.79■■■■■ 4.44
CHPT1-210ENST00000552351 KIF14Q15058 1648 aa42.78■■■■■ 4.44
CHPT1-210ENST00000552351 TTC37Q6PGP7 1564 aa42.72■■■■■ 4.43
CHPT1-210ENST00000552351 KDM6BO15054 1643 aa42.65■■■■■ 4.42
CHPT1-210ENST00000552351 TIAM1Q13009 1591 aa42.64■■■■■ 4.42
CHPT1-210ENST00000552351 MAP3K1Q13233 1512 aa42.63■■■■■ 4.42
CHPT1-210ENST00000552351 MTUS2Q5JR59 1369 aa42.61■■■■■ 4.41
CHPT1-210ENST00000552351 PHLDB1Q86UU1 1377 aa42.59■■■■■ 4.41
CHPT1-210ENST00000552351 EHBP1L1Q8N3D4 1523 aa42.59■■■■■ 4.41
CHPT1-210ENST00000552351 MYO5CQ9NQX4 1742 aa42.59■■■■■ 4.41
CHPT1-210ENST00000552351 NEO1Q92859 1461 aa42.58■■■■■ 4.41
CHPT1-210ENST00000552351 ARAP3Q8WWN8 1544 aa42.58■■■■■ 4.41
CHPT1-210ENST00000552351 PLCH2O75038 1416 aa42.56■■■■■ 4.4
CHPT1-210ENST00000552351 CFAP74Q9C0B2 1584 aa42.55■■■■■ 4.4
CHPT1-210ENST00000552351 FANCAO15360 1455 aa42.49■■■■■ 4.39
CHPT1-210ENST00000552351 LRRC9Q6ZRR7 1453 aa42.44■■■■■ 4.38
CHPT1-210ENST00000552351 COL17A1Q9UMD9 1497 aaPredicted RBP42.44■■■■■ 4.38
CHPT1-210ENST00000552351 PREX2Q70Z35 1606 aa42.43■■■■■ 4.38
CHPT1-210ENST00000552351 APLP2Q06481 763 aa42.42■■■■■ 4.38
CHPT1-210ENST00000552351 CDC42BPAQ5VT25 1732 aa42.41■■■■■ 4.38
CHPT1-210ENST00000552351 CDC42BPBQ9Y5S2 1711 aa42.4■■■■■ 4.38
CHPT1-210ENST00000552351 SUPT6HQ7KZ85 1726 aaKnown RBP42.39■■■■■ 4.38
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms