RNA–Protein interactions for RNA: ENST00000552286.5

MTA1-220, Transcript of metastasis associated 1, humanhuman

TSL 2

Gene MTA1, Length 1,943 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-220ENST00000552286 HRCP23327 699 aa30.75■■■□□ 2.51
MTA1-220ENST00000552286 SYNJ2O15056 1496 aa30.73■■■□□ 2.51
MTA1-220ENST00000552286 GRIN2AQ12879 1464 aa30.71■■■□□ 2.51
MTA1-220ENST00000552286 CHMP7Q8WUX9 453 aaPredicted RBP30.66■■■□□ 2.5
MTA1-220ENST00000552286 FBLN2P98095 1184 aa30.63■■■□□ 2.49
MTA1-220ENST00000552286 PPARGC1BQ86YN6 1023 aaKnown RBP30.59■■■□□ 2.49
MTA1-220ENST00000552286 ARHGAP35Q9NRY4 1499 aa30.56■■■□□ 2.48
MTA1-220ENST00000552286 CHD1O14646 1710 aa30.55■■■□□ 2.48
MTA1-220ENST00000552286 IQGAP2Q13576 1575 aa30.55■■■□□ 2.48
MTA1-220ENST00000552286 CEP170Q5SW79 1584 aa30.54■■■□□ 2.48
MTA1-220ENST00000552286 ARAP1Q96P48 1450 aa30.52■■■□□ 2.48
MTA1-220ENST00000552286 EFCAB5A4FU69 1503 aa30.48■■■□□ 2.47
MTA1-220ENST00000552286 KIAA0586Q9BVV6 1533 aa30.48■■■□□ 2.47
MTA1-220ENST00000552286 NUP160Q12769 1436 aa30.48■■■□□ 2.47
MTA1-220ENST00000552286 VPS8Q8N3P4 1428 aa30.45■■■□□ 2.47
MTA1-220ENST00000552286 SAMD9Q5K651 1589 aa30.42■■■□□ 2.46
MTA1-220ENST00000552286 P3H3Q8IVL6 736 aa30.37■■■□□ 2.45
MTA1-220ENST00000552286 UGGT2Q9NYU1 1516 aa30.36■■■□□ 2.45
MTA1-220ENST00000552286 FHOD3Q2V2M9 1422 aa30.36■■■□□ 2.45
MTA1-220ENST00000552286 KIAA0556O60303 1618 aa30.24■■■□□ 2.43
MTA1-220ENST00000552286 DISP1Q96F81 1524 aa30.24■■■□□ 2.43
MTA1-220ENST00000552286 TTBK1Q5TCY1 1321 aaPredicted RBP30.23■■■□□ 2.43
MTA1-220ENST00000552286 JPH4Q96JJ6 628 aa30.21■■■□□ 2.43
MTA1-220ENST00000552286 FMN1Q68DA7 1419 aa30.19■■■□□ 2.42
MTA1-220ENST00000552286 PCF11O94913 1555 aaKnown RBP30.18■■■□□ 2.42
MTA1-220ENST00000552286 CLASP1Q7Z460 1538 aa30.16■■■□□ 2.42
MTA1-220ENST00000552286 SHROOM2Q13796 1616 aa30.13■■■□□ 2.41
MTA1-220ENST00000552286 APLP2Q06481 763 aa30.12■■■□□ 2.41
MTA1-220ENST00000552286 CARMIL2Q6F5E8 1435 aa30.12■■■□□ 2.41
MTA1-220ENST00000552286 FYCO1Q9BQS8 1478 aa30.09■■■□□ 2.41
MTA1-220ENST00000552286 CASKIN1Q8WXD9 1431 aa30.09■■■□□ 2.41
MTA1-220ENST00000552286 PRG4Q92954 1404 aaPredicted RBP30.08■■■□□ 2.41
MTA1-220ENST00000552286 ZEB1P37275 1124 aaPredicted RBP30.04■■■□□ 2.4
MTA1-220ENST00000552286 ATP1B4Q9UN42 357 aaPredicted RBP30.03■■■□□ 2.4
MTA1-220ENST00000552286 TIAM1Q13009 1591 aa29.98■■■□□ 2.39
MTA1-220ENST00000552286 CFAP43Q8NDM7 1665 aa29.97■■■□□ 2.39
MTA1-220ENST00000552286 OSCARQ8IYS5 282 aa29.96■■■□□ 2.39
MTA1-220ENST00000552286 MAP3K1Q13233 1512 aa29.95■■■□□ 2.38
MTA1-220ENST00000552286 LRRIQ1Q96JM4 1722 aa29.95■■■□□ 2.38
MTA1-220ENST00000552286 ERCC6L2Q5T890 1561 aa29.95■■■□□ 2.38
MTA1-220ENST00000552286 HECW1Q76N89 1606 aa29.94■■■□□ 2.38
MTA1-220ENST00000552286 RAPGEF6Q8TEU7 1601 aa29.91■■■□□ 2.38
MTA1-220ENST00000552286 KANK4Q5T7N3 995 aaPredicted RBP29.88■■■□□ 2.37
MTA1-220ENST00000552286 PLB1Q6P1J6 1458 aa29.86■■■□□ 2.37
MTA1-220ENST00000552286 PTPRGP23470 1445 aa29.84■■■□□ 2.37
MTA1-220ENST00000552286 CCDC18Q5T9S5 1454 aa29.83■■■□□ 2.37
MTA1-220ENST00000552286 LRRC9Q6ZRR7 1453 aa29.82■■■□□ 2.36
MTA1-220ENST00000552286 NUP153P49790 1475 aaKnown RBP29.81■■■□□ 2.36
MTA1-220ENST00000552286 EPRSP07814 1512 aaKnown RBP29.81■■■□□ 2.36
MTA1-220ENST00000552286 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.81■■■□□ 2.36
MTA1-220ENST00000552286 ABCA8O94911 1581 aa29.8■■■□□ 2.36
MTA1-220ENST00000552286 CDK13Q14004 1512 aaKnown RBP29.78■■■□□ 2.36
MTA1-220ENST00000552286 ARID3CA6NKF2 412 aa29.76■■■□□ 2.35
MTA1-220ENST00000552286 CCER1Q8TC90 406 aaPredicted RBP29.73■■■□□ 2.35
MTA1-220ENST00000552286 MTUS2Q5JR59 1369 aa29.7■■■□□ 2.34
MTA1-220ENST00000552286 UACAQ9BZF9 1416 aa29.67■■■□□ 2.34
MTA1-220ENST00000552286 MAGI3Q5TCQ9 1506 aa29.66■■■□□ 2.34
MTA1-220ENST00000552286 EHBP1L1Q8N3D4 1523 aa29.66■■■□□ 2.34
MTA1-220ENST00000552286 HNRNPUL2Q1KMD3 747 aaKnown RBP29.63■■■□□ 2.33
MTA1-220ENST00000552286 ABCC2Q92887 1545 aa29.62■■■□□ 2.33
MTA1-220ENST00000552286 SUPT6HQ7KZ85 1726 aaKnown RBP29.58■■■□□ 2.33
MTA1-220ENST00000552286 ATP10BO94823 1461 aa29.58■■■□□ 2.33
MTA1-220ENST00000552286 RRBP1Q9P2E9 1410 aaKnown RBP29.55■■■□□ 2.32
MTA1-220ENST00000552286 CDK11AQ9UQ88 783 aaPredicted RBP29.54■■■□□ 2.32
MTA1-220ENST00000552286 PHLDB1Q86UU1 1377 aa29.53■■■□□ 2.32
MTA1-220ENST00000552286 ARHGEF11O15085 1522 aa29.53■■■□□ 2.32
MTA1-220ENST00000552286 UHRF1BP1LA0JNW5 1464 aa29.53■■■□□ 2.32
MTA1-220ENST00000552286 NCOA2Q15596 1464 aa29.52■■■□□ 2.32
MTA1-220ENST00000552286 ADCY10Q96PN6 1610 aa29.48■■■□□ 2.31
MTA1-220ENST00000552286 TROQ12816 1431 aaPredicted RBP29.47■■■□□ 2.31
MTA1-220ENST00000552286 ZCCHC11Q5TAX3 1644 aaKnown RBP29.45■■■□□ 2.3
MTA1-220ENST00000552286 CCNB3Q8WWL7 1395 aa29.43■■■□□ 2.3
MTA1-220ENST00000552286 KDM5BQ9UGL1 1544 aa29.42■■■□□ 2.3
MTA1-220ENST00000552286 PLEKHD1A6NEE1 506 aa29.41■■■□□ 2.3
MTA1-220ENST00000552286 RIMBP3CA6NJZ7 1639 aa29.41■■■□□ 2.3
MTA1-220ENST00000552286 RIMBP3BA6NNM3 1639 aa29.41■■■□□ 2.3
MTA1-220ENST00000552286 RIMBP3Q9UFD9 1639 aa29.41■■■□□ 2.3
MTA1-220ENST00000552286 KIF14Q15058 1648 aa29.4■■■□□ 2.3
MTA1-220ENST00000552286 MYOM3Q5VTT5 1437 aa29.37■■■□□ 2.29
MTA1-220ENST00000552286 FGD6Q6ZV73 1430 aa29.35■■■□□ 2.29
MTA1-220ENST00000552286 FAM50AQ14320 339 aaKnown RBP29.26■■■□□ 2.27
MTA1-220ENST00000552286 PTPN23Q9H3S7 1636 aa29.25■■■□□ 2.27
MTA1-220ENST00000552286 ITSN2Q9NZM3 1697 aa29.25■■■□□ 2.27
MTA1-220ENST00000552286 ABCC10Q5T3U5 1492 aa29.23■■■□□ 2.27
MTA1-220ENST00000552286 CYB5RLQ6IPT4 315 aa29.22■■■□□ 2.27
MTA1-220ENST00000552286 MIA2Q96PC5 1412 aa29.21■■■□□ 2.27
MTA1-220ENST00000552286 CDC42BPAQ5VT25 1732 aa29.2■■■□□ 2.27
MTA1-220ENST00000552286 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.2■■■□□ 2.261e-8■■■□□ 14.7
MTA1-220ENST00000552286 GPATCH8Q9UKJ3 1502 aaKnown RBP29.19■■■□□ 2.26
MTA1-220ENST00000552286 NPM1P06748 294 aaKnown RBP eCLIP29.18■■■□□ 2.26
MTA1-220ENST00000552286 WDR7Q9Y4E6 1490 aa29.18■■■□□ 2.26
MTA1-220ENST00000552286 ITGAEP38570 1179 aa29.18■■■□□ 2.26
MTA1-220ENST00000552286 TTC37Q6PGP7 1564 aa29.17■■■□□ 2.26
MTA1-220ENST00000552286 TCOF1Q13428 1488 aaKnown RBP29.16■■■□□ 2.26
MTA1-220ENST00000552286 KCNH8Q96L42 1107 aa29.16■■■□□ 2.26
MTA1-220ENST00000552286 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.16■■■□□ 2.262e-6■■□□□ 13
MTA1-220ENST00000552286 ASXL2Q76L83 1435 aa29.14■■■□□ 2.26
MTA1-220ENST00000552286 CFDP1Q9UEE9 299 aaPredicted RBP29.1■■■□□ 2.25
MTA1-220ENST00000552286 PREX2Q70Z35 1606 aa29.1■■■□□ 2.25
MTA1-220ENST00000552286 DHX57Q6P158 1386 aaKnown RBP29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms