RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 CEP162Q5TB80 1403 aa16.62■□□□□ 0.25
NEK3-203ENST00000551355 KIAA0586Q9BVV6 1533 aa16.61■□□□□ 0.25
NEK3-203ENST00000551355 CLIP1P30622 1438 aa16.58■□□□□ 0.24
NEK3-203ENST00000551355 CTTNBP2Q8WZ74 1663 aa16.55■□□□□ 0.24
NEK3-203ENST00000551355 IQGAP2Q13576 1575 aa16.55■□□□□ 0.24
NEK3-203ENST00000551355 CEP170Q5SW79 1584 aa16.54■□□□□ 0.24
NEK3-203ENST00000551355 EFCAB5A4FU69 1503 aa16.51■□□□□ 0.23
NEK3-203ENST00000551355 CHD1O14646 1710 aa16.51■□□□□ 0.23
NEK3-203ENST00000551355 OSCARQ8IYS5 282 aa16.51■□□□□ 0.23
NEK3-203ENST00000551355 JPH4Q96JJ6 628 aa16.5■□□□□ 0.23
NEK3-203ENST00000551355 UGGT2Q9NYU1 1516 aa16.5■□□□□ 0.23
NEK3-203ENST00000551355 RANGAP1P46060 587 aaPredicted RBP16.49■□□□□ 0.23
NEK3-203ENST00000551355 ARHGAP35Q9NRY4 1499 aa16.47■□□□□ 0.23
NEK3-203ENST00000551355 CARMIL2Q6F5E8 1435 aa16.45■□□□□ 0.22
NEK3-203ENST00000551355 CLASP1Q7Z460 1538 aa16.43■□□□□ 0.22
NEK3-203ENST00000551355 SAMD9Q5K651 1589 aa16.43■□□□□ 0.22
NEK3-203ENST00000551355 VPS8Q8N3P4 1428 aa16.4■□□□□ 0.22
NEK3-203ENST00000551355 ARAP1Q96P48 1450 aa16.4■□□□□ 0.22
NEK3-203ENST00000551355 FMN1Q68DA7 1419 aa16.39■□□□□ 0.21
NEK3-203ENST00000551355 DISP1Q96F81 1524 aa16.39■□□□□ 0.21
NEK3-203ENST00000551355 PRG4Q92954 1404 aaPredicted RBP16.38■□□□□ 0.21
NEK3-203ENST00000551355 SHROOM2Q13796 1616 aa16.37■□□□□ 0.21
NEK3-203ENST00000551355 P3H3Q8IVL6 736 aa16.37■□□□□ 0.21
NEK3-203ENST00000551355 KIAA0556O60303 1618 aa16.36■□□□□ 0.21
NEK3-203ENST00000551355 FHOD3Q2V2M9 1422 aa16.36■□□□□ 0.21
NEK3-203ENST00000551355 APLP2Q06481 763 aa16.3■□□□□ 0.2
NEK3-203ENST00000551355 CASKIN1Q8WXD9 1431 aa16.29■□□□□ 0.2
NEK3-203ENST00000551355 PTPRGP23470 1445 aa16.28■□□□□ 0.2
NEK3-203ENST00000551355 FYCO1Q9BQS8 1478 aa16.27■□□□□ 0.19
NEK3-203ENST00000551355 MAP3K1Q13233 1512 aa16.22■□□□□ 0.19
NEK3-203ENST00000551355 ATP1B4Q9UN42 357 aaPredicted RBP16.2■□□□□ 0.18
NEK3-203ENST00000551355 TTBK1Q5TCY1 1321 aaPredicted RBP16.19■□□□□ 0.18
NEK3-203ENST00000551355 PCF11O94913 1555 aaKnown RBP16.19■□□□□ 0.18
NEK3-203ENST00000551355 UACAQ9BZF9 1416 aa16.19■□□□□ 0.18
NEK3-203ENST00000551355 ERCC6L2Q5T890 1561 aa16.18■□□□□ 0.18
NEK3-203ENST00000551355 CCDC18Q5T9S5 1454 aa16.18■□□□□ 0.18
NEK3-203ENST00000551355 HECW1Q76N89 1606 aa16.18■□□□□ 0.18
NEK3-203ENST00000551355 PLB1Q6P1J6 1458 aa16.16■□□□□ 0.18
NEK3-203ENST00000551355 RAPGEF6Q8TEU7 1601 aa16.16■□□□□ 0.18
NEK3-203ENST00000551355 ABCA8O94911 1581 aa16.16■□□□□ 0.18
NEK3-203ENST00000551355 ARHGEF11O15085 1522 aa16.14■□□□□ 0.18
NEK3-203ENST00000551355 CDK11AQ9UQ88 783 aaPredicted RBP16.14■□□□□ 0.17
NEK3-203ENST00000551355 UHRF1BP1LA0JNW5 1464 aa16.14■□□□□ 0.17
NEK3-203ENST00000551355 NUP153P49790 1475 aaKnown RBP16.13■□□□□ 0.17
NEK3-203ENST00000551355 EPRSP07814 1512 aaKnown RBP16.13■□□□□ 0.17
NEK3-203ENST00000551355 ABCC2Q92887 1545 aa16.11■□□□□ 0.17
NEK3-203ENST00000551355 TIAM1Q13009 1591 aa16.11■□□□□ 0.17
NEK3-203ENST00000551355 LRRC9Q6ZRR7 1453 aa16.08■□□□□ 0.16
NEK3-203ENST00000551355 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.07■□□□□ 0.16
NEK3-203ENST00000551355 HNRNPUL2Q1KMD3 747 aaKnown RBP16.07■□□□□ 0.16
NEK3-203ENST00000551355 MTUS2Q5JR59 1369 aa16.07■□□□□ 0.16
NEK3-203ENST00000551355 CFAP43Q8NDM7 1665 aa16.06■□□□□ 0.16
NEK3-203ENST00000551355 ATP10BO94823 1461 aa16.06■□□□□ 0.16
NEK3-203ENST00000551355 PLEKHD1A6NEE1 506 aa16.05■□□□□ 0.16
NEK3-203ENST00000551355 KANK4Q5T7N3 995 aaPredicted RBP16.05■□□□□ 0.16
NEK3-203ENST00000551355 KDM5BQ9UGL1 1544 aa16.04■□□□□ 0.16
NEK3-203ENST00000551355 NPM1P06748 294 aaKnown RBP eCLIP16.04■□□□□ 0.16
NEK3-203ENST00000551355 RIMBP3CA6NJZ7 1639 aa16.04■□□□□ 0.16
NEK3-203ENST00000551355 RIMBP3BA6NNM3 1639 aa16.04■□□□□ 0.16
NEK3-203ENST00000551355 RIMBP3Q9UFD9 1639 aa16.04■□□□□ 0.16
NEK3-203ENST00000551355 CDK13Q14004 1512 aaKnown RBP16.03■□□□□ 0.16
NEK3-203ENST00000551355 EHBP1L1Q8N3D4 1523 aa16.01■□□□□ 0.15
NEK3-203ENST00000551355 ARID3CA6NKF2 412 aa16.01■□□□□ 0.15
NEK3-203ENST00000551355 CYB5RLQ6IPT4 315 aa16.01■□□□□ 0.15
NEK3-203ENST00000551355 PPARGC1BQ86YN6 1023 aaKnown RBP16.01■□□□□ 0.15
NEK3-203ENST00000551355 TROQ12816 1431 aaPredicted RBP16■□□□□ 0.15
NEK3-203ENST00000551355 ADCY10Q96PN6 1610 aa15.98■□□□□ 0.15
NEK3-203ENST00000551355 LRRIQ1Q96JM4 1722 aa15.97■□□□□ 0.15
NEK3-203ENST00000551355 TRIM26Q12899 539 aaPredicted RBP15.96■□□□□ 0.15
NEK3-203ENST00000551355 DNAJC5Q9H3Z4 198 aa15.94■□□□□ 0.14
NEK3-203ENST00000551355 MAGI3Q5TCQ9 1506 aa15.94■□□□□ 0.14
NEK3-203ENST00000551355 ZCCHC11Q5TAX3 1644 aaKnown RBP15.93■□□□□ 0.14
NEK3-203ENST00000551355 NCOA2Q15596 1464 aa15.92■□□□□ 0.14
NEK3-203ENST00000551355 SENP3Q9H4L4 574 aaPredicted RBP15.92■□□□□ 0.14
NEK3-203ENST00000551355 SUPT6HQ7KZ85 1726 aaKnown RBP15.91■□□□□ 0.14
NEK3-203ENST00000551355 WDR7Q9Y4E6 1490 aa15.9■□□□□ 0.14
NEK3-203ENST00000551355 ASXL2Q76L83 1435 aa15.88■□□□□ 0.13
NEK3-203ENST00000551355 KIF14Q15058 1648 aa15.88■□□□□ 0.13
NEK3-203ENST00000551355 PHLDB1Q86UU1 1377 aa15.87■□□□□ 0.13
NEK3-203ENST00000551355 CCNB3Q8WWL7 1395 aa15.87■□□□□ 0.13
NEK3-203ENST00000551355 MYOM3Q5VTT5 1437 aa15.86■□□□□ 0.13
NEK3-203ENST00000551355 RRBP1Q9P2E9 1410 aaKnown RBP15.86■□□□□ 0.13
NEK3-203ENST00000551355 MAPKBP1O60336 1514 aa15.86■□□□□ 0.13
NEK3-203ENST00000551355 MIA2Q96PC5 1412 aa15.85■□□□□ 0.13
NEK3-203ENST00000551355 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.85■□□□□ 0.13
NEK3-203ENST00000551355 KCNH8Q96L42 1107 aa15.84■□□□□ 0.13
NEK3-203ENST00000551355 ABCC10Q5T3U5 1492 aa15.83■□□□□ 0.12
NEK3-203ENST00000551355 FGD6Q6ZV73 1430 aa15.82■□□□□ 0.12
NEK3-203ENST00000551355 CFDP1Q9UEE9 299 aaPredicted RBP15.81■□□□□ 0.12
NEK3-203ENST00000551355 GPATCH8Q9UKJ3 1502 aaKnown RBP15.8■□□□□ 0.12
NEK3-203ENST00000551355 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.78■□□□□ 0.12
NEK3-203ENST00000551355 PCGF6Q9BYE7 350 aa15.77■□□□□ 0.12
NEK3-203ENST00000551355 PLCH2O75038 1416 aa15.77■□□□□ 0.11
NEK3-203ENST00000551355 ITSN2Q9NZM3 1697 aa15.76■□□□□ 0.11
NEK3-203ENST00000551355 FAM50AQ14320 339 aaKnown RBP15.76■□□□□ 0.11
NEK3-203ENST00000551355 PHF23Q9BUL5 403 aaPredicted RBP15.76■□□□□ 0.11
NEK3-203ENST00000551355 TCOF1Q13428 1488 aaKnown RBP15.76■□□□□ 0.11
NEK3-203ENST00000551355 ARAP3Q8WWN8 1544 aa15.75■□□□□ 0.11
NEK3-203ENST00000551355 EFCAB2Q5VUJ9 269 aa15.75■□□□□ 0.11
NEK3-203ENST00000551355 ABCA9Q8IUA7 1624 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms