RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 IQGAP2Q13576 1575 aa22.5■■□□□ 1.19
LETMD1-229ENST00000551261 VPS8Q8N3P4 1428 aa22.48■■□□□ 1.19
LETMD1-229ENST00000551261 KIAA0586Q9BVV6 1533 aa22.47■■□□□ 1.19
LETMD1-229ENST00000551261 ARHGAP35Q9NRY4 1499 aa22.46■■□□□ 1.19
LETMD1-229ENST00000551261 NUP160Q12769 1436 aa22.44■■□□□ 1.18
LETMD1-229ENST00000551261 SAMD9Q5K651 1589 aa22.44■■□□□ 1.18
LETMD1-229ENST00000551261 CHMP7Q8WUX9 453 aaPredicted RBP22.44■■□□□ 1.18
LETMD1-229ENST00000551261 ARAP1Q96P48 1450 aa22.42■■□□□ 1.18
LETMD1-229ENST00000551261 UGGT2Q9NYU1 1516 aa22.4■■□□□ 1.18
LETMD1-229ENST00000551261 CEP170Q5SW79 1584 aa22.38■■□□□ 1.17
LETMD1-229ENST00000551261 CHD1O14646 1710 aa22.35■■□□□ 1.17
LETMD1-229ENST00000551261 FMN1Q68DA7 1419 aa22.31■■□□□ 1.16
LETMD1-229ENST00000551261 FBLN2P98095 1184 aa22.27■■□□□ 1.16
LETMD1-229ENST00000551261 KIAA0556O60303 1618 aa22.26■■□□□ 1.15
LETMD1-229ENST00000551261 RANGAP1P46060 587 aaPredicted RBP22.25■■□□□ 1.15
LETMD1-229ENST00000551261 FYCO1Q9BQS8 1478 aa22.25■■□□□ 1.15
LETMD1-229ENST00000551261 MAP3K1Q13233 1512 aa22.24■■□□□ 1.15
LETMD1-229ENST00000551261 FHOD3Q2V2M9 1422 aa22.23■■□□□ 1.15
LETMD1-229ENST00000551261 CARMIL2Q6F5E8 1435 aa22.23■■□□□ 1.15
LETMD1-229ENST00000551261 APLP2Q06481 763 aa22.2■■□□□ 1.14
LETMD1-229ENST00000551261 CASKIN1Q8WXD9 1431 aa22.2■■□□□ 1.14
LETMD1-229ENST00000551261 DISP1Q96F81 1524 aa22.2■■□□□ 1.14
LETMD1-229ENST00000551261 SHROOM2Q13796 1616 aa22.2■■□□□ 1.14
LETMD1-229ENST00000551261 PCF11O94913 1555 aaKnown RBP22.17■■□□□ 1.14
LETMD1-229ENST00000551261 CLASP1Q7Z460 1538 aa22.17■■□□□ 1.14
LETMD1-229ENST00000551261 CFAP43Q8NDM7 1665 aa22.13■■□□□ 1.13
LETMD1-229ENST00000551261 HECW1Q76N89 1606 aa22.12■■□□□ 1.13
LETMD1-229ENST00000551261 JPH4Q96JJ6 628 aa22.11■■□□□ 1.13
LETMD1-229ENST00000551261 TIAM1Q13009 1591 aa22.1■■□□□ 1.13
LETMD1-229ENST00000551261 CCDC18Q5T9S5 1454 aa22.09■■□□□ 1.13
LETMD1-229ENST00000551261 P3H3Q8IVL6 736 aa22.06■■□□□ 1.12
LETMD1-229ENST00000551261 PRG4Q92954 1404 aaPredicted RBP22.04■■□□□ 1.12
LETMD1-229ENST00000551261 TRIM26Q12899 539 aaPredicted RBP22.03■■□□□ 1.12
LETMD1-229ENST00000551261 RAPGEF6Q8TEU7 1601 aa22.02■■□□□ 1.11
LETMD1-229ENST00000551261 LRRC9Q6ZRR7 1453 aa21.96■■□□□ 1.11
LETMD1-229ENST00000551261 ABCA8O94911 1581 aa21.94■■□□□ 1.1
LETMD1-229ENST00000551261 EPRSP07814 1512 aaKnown RBP21.93■■□□□ 1.1
LETMD1-229ENST00000551261 OSCARQ8IYS5 282 aa21.93■■□□□ 1.1
LETMD1-229ENST00000551261 EHBP1L1Q8N3D4 1523 aa21.93■■□□□ 1.1
LETMD1-229ENST00000551261 PTPRGP23470 1445 aa21.91■■□□□ 1.1
LETMD1-229ENST00000551261 LRRIQ1Q96JM4 1722 aa21.9■■□□□ 1.1
LETMD1-229ENST00000551261 NUP153P49790 1475 aaKnown RBP21.9■■□□□ 1.1
LETMD1-229ENST00000551261 PLB1Q6P1J6 1458 aa21.85■■□□□ 1.09
LETMD1-229ENST00000551261 MTUS2Q5JR59 1369 aa21.85■■□□□ 1.09
LETMD1-229ENST00000551261 ATP1B4Q9UN42 357 aaPredicted RBP21.84■■□□□ 1.09
LETMD1-229ENST00000551261 SUPT6HQ7KZ85 1726 aaKnown RBP21.83■■□□□ 1.08
LETMD1-229ENST00000551261 UACAQ9BZF9 1416 aa21.82■■□□□ 1.08
LETMD1-229ENST00000551261 UHRF1BP1LA0JNW5 1464 aa21.82■■□□□ 1.08
LETMD1-229ENST00000551261 ABCC2Q92887 1545 aa21.81■■□□□ 1.08
LETMD1-229ENST00000551261 KANK4Q5T7N3 995 aaPredicted RBP21.81■■□□□ 1.08
LETMD1-229ENST00000551261 CDK11AQ9UQ88 783 aaPredicted RBP21.81■■□□□ 1.08
LETMD1-229ENST00000551261 ERCC6L2Q5T890 1561 aa21.81■■□□□ 1.08
LETMD1-229ENST00000551261 PPARGC1BQ86YN6 1023 aaKnown RBP21.79■■□□□ 1.08
LETMD1-229ENST00000551261 CDK13Q14004 1512 aaKnown RBP21.79■■□□□ 1.08
LETMD1-229ENST00000551261 PCGF6Q9BYE7 350 aa21.78■■□□□ 1.08
LETMD1-229ENST00000551261 RRBP1Q9P2E9 1410 aaKnown RBP21.78■■□□□ 1.08
LETMD1-229ENST00000551261 ARHGEF11O15085 1522 aa21.75■■□□□ 1.07
LETMD1-229ENST00000551261 ADCY10Q96PN6 1610 aa21.73■■□□□ 1.07
LETMD1-229ENST00000551261 TROQ12816 1431 aaPredicted RBP21.72■■□□□ 1.07
LETMD1-229ENST00000551261 MAGI3Q5TCQ9 1506 aa21.71■■□□□ 1.07
LETMD1-229ENST00000551261 NCOA2Q15596 1464 aa21.71■■□□□ 1.07
LETMD1-229ENST00000551261 TTBK1Q5TCY1 1321 aaPredicted RBP21.69■■□□□ 1.06
LETMD1-229ENST00000551261 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.69■■□□□ 1.06
LETMD1-229ENST00000551261 ATP10BO94823 1461 aa21.69■■□□□ 1.06
LETMD1-229ENST00000551261 CCNB3Q8WWL7 1395 aa21.68■■□□□ 1.06
LETMD1-229ENST00000551261 KDM5BQ9UGL1 1544 aa21.67■■□□□ 1.06
LETMD1-229ENST00000551261 MYOM3Q5VTT5 1437 aa21.66■■□□□ 1.06
LETMD1-229ENST00000551261 KIF14Q15058 1648 aa21.66■■□□□ 1.06
LETMD1-229ENST00000551261 PHLDB1Q86UU1 1377 aa21.65■■□□□ 1.06
LETMD1-229ENST00000551261 MIA2Q96PC5 1412 aa21.63■■□□□ 1.05
LETMD1-229ENST00000551261 ITSN2Q9NZM3 1697 aa21.63■■□□□ 1.05
LETMD1-229ENST00000551261 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.62■■□□□ 1.05
LETMD1-229ENST00000551261 HNRNPUL2Q1KMD3 747 aaKnown RBP21.62■■□□□ 1.05
LETMD1-229ENST00000551261 FGD6Q6ZV73 1430 aa21.62■■□□□ 1.05
LETMD1-229ENST00000551261 PLEKHD1A6NEE1 506 aa21.61■■□□□ 1.05
LETMD1-229ENST00000551261 ZCCHC11Q5TAX3 1644 aaKnown RBP21.61■■□□□ 1.05
LETMD1-229ENST00000551261 TCOF1Q13428 1488 aaKnown RBP21.56■■□□□ 1.04
LETMD1-229ENST00000551261 PTPN23Q9H3S7 1636 aa21.52■■□□□ 1.04
LETMD1-229ENST00000551261 ARID3CA6NKF2 412 aa21.52■■□□□ 1.04
LETMD1-229ENST00000551261 ABCC10Q5T3U5 1492 aa21.51■■□□□ 1.03
LETMD1-229ENST00000551261 RIMBP3CA6NJZ7 1639 aa21.5■■□□□ 1.03
LETMD1-229ENST00000551261 RIMBP3BA6NNM3 1639 aa21.5■■□□□ 1.03
LETMD1-229ENST00000551261 RIMBP3Q9UFD9 1639 aa21.5■■□□□ 1.03
LETMD1-229ENST00000551261 WDR7Q9Y4E6 1490 aa21.46■■□□□ 1.03
LETMD1-229ENST00000551261 GPATCH8Q9UKJ3 1502 aaKnown RBP21.45■■□□□ 1.02
LETMD1-229ENST00000551261 PREX2Q70Z35 1606 aa21.44■■□□□ 1.02
LETMD1-229ENST00000551261 CDC42BPAQ5VT25 1732 aa21.43■■□□□ 1.02
LETMD1-229ENST00000551261 ARAP3Q8WWN8 1544 aa21.43■■□□□ 1.02
LETMD1-229ENST00000551261 NPM1P06748 294 aaKnown RBP eCLIP21.42■■□□□ 1.02
LETMD1-229ENST00000551261 MYO5CQ9NQX4 1742 aa21.41■■□□□ 1.02
LETMD1-229ENST00000551261 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.4■■□□□ 1.02
LETMD1-229ENST00000551261 FAM50AQ14320 339 aaKnown RBP21.4■■□□□ 1.02
LETMD1-229ENST00000551261 MAPKBP1O60336 1514 aa21.39■■□□□ 1.01
LETMD1-229ENST00000551261 TTC37Q6PGP7 1564 aa21.38■■□□□ 1.01
LETMD1-229ENST00000551261 AKNAQ7Z591 1439 aa21.38■■□□□ 1.01
LETMD1-229ENST00000551261 CAMSAP2Q08AD1 1489 aa21.37■■□□□ 1.01
LETMD1-229ENST00000551261 ASXL2Q76L83 1435 aa21.37■■□□□ 1.01
LETMD1-229ENST00000551261 DNMT1P26358 1616 aaKnown RBP21.37■■□□□ 1.01
LETMD1-229ENST00000551261 CFDP1Q9UEE9 299 aaPredicted RBP21.36■■□□□ 1.01
LETMD1-229ENST00000551261 ABCA9Q8IUA7 1624 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms