RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 RAB3GAP2Q9H2M9 1393 aa13.38□□□□□ -0.27
UBE2N-205ENST00000550657 PHLDB1Q86UU1 1377 aa13.37□□□□□ -0.27
UBE2N-205ENST00000550657 DNAJC5BQ9UF47 199 aa13.36□□□□□ -0.27
UBE2N-205ENST00000550657 PELP1Q8IZL8 1130 aaKnown RBP13.36□□□□□ -0.27
UBE2N-205ENST00000550657 DNMBPQ6XZF7 1577 aa13.35□□□□□ -0.27
UBE2N-205ENST00000550657 POLA1P09884 1462 aaPredicted RBP13.34□□□□□ -0.27
UBE2N-205ENST00000550657 LRRC9Q6ZRR7 1453 aa13.34□□□□□ -0.27
UBE2N-205ENST00000550657 TDRD9Q8NDG6 1382 aaKnown RBP13.34□□□□□ -0.27
UBE2N-205ENST00000550657 TIAM1Q13009 1591 aa13.33□□□□□ -0.27
UBE2N-205ENST00000550657 SIN3AQ96ST3 1273 aa13.33□□□□□ -0.28
UBE2N-205ENST00000550657 FHAD1B1AJZ9 1412 aa13.33□□□□□ -0.28
UBE2N-205ENST00000550657 TOPBP1Q92547 1522 aa13.33□□□□□ -0.28
UBE2N-205ENST00000550657 LAMC3Q9Y6N6 1575 aa13.31□□□□□ -0.28
UBE2N-205ENST00000550657 SETD5Q9C0A6 1442 aa13.3□□□□□ -0.28
UBE2N-205ENST00000550657 ABCA10Q8WWZ4 1543 aa13.28□□□□□ -0.28
UBE2N-205ENST00000550657 PCF11O94913 1555 aaKnown RBP13.28□□□□□ -0.28
UBE2N-205ENST00000550657 HIRIP3Q9BW71 556 aaPredicted RBP13.26□□□□□ -0.29
UBE2N-205ENST00000550657 URB2Q14146 1524 aaKnown RBP13.25□□□□□ -0.29
UBE2N-205ENST00000550657 ARID3CA6NKF2 412 aa13.24□□□□□ -0.29
UBE2N-205ENST00000550657 MAP3K1Q13233 1512 aa13.24□□□□□ -0.29
UBE2N-205ENST00000550657 MTUS2Q5JR59 1369 aa13.23□□□□□ -0.29
UBE2N-205ENST00000550657 MAPKBP1O60336 1514 aa13.23□□□□□ -0.29
UBE2N-205ENST00000550657 WDR97A6NE52 1622 aa13.22□□□□□ -0.29
UBE2N-205ENST00000550657 KIF21AQ7Z4S6 1674 aa13.22□□□□□ -0.29
UBE2N-205ENST00000550657 KCNH8Q96L42 1107 aa13.21□□□□□ -0.29
UBE2N-205ENST00000550657 CASKIN1Q8WXD9 1431 aa13.21□□□□□ -0.3
UBE2N-205ENST00000550657 DDX10Q13206 875 aaKnown RBP13.21□□□□□ -0.3
UBE2N-205ENST00000550657 PDS5BQ9NTI5 1447 aa13.2□□□□□ -0.3
UBE2N-205ENST00000550657 FYCO1Q9BQS8 1478 aa13.19□□□□□ -0.3
UBE2N-205ENST00000550657 CUL7Q14999 1698 aa13.19□□□□□ -0.3
UBE2N-205ENST00000550657 GAPVD1Q14C86 1478 aa13.18□□□□□ -0.3
UBE2N-205ENST00000550657 FMN1Q68DA7 1419 aa13.18□□□□□ -0.3
UBE2N-205ENST00000550657 EFCAB5A4FU69 1503 aa13.16□□□□□ -0.3
UBE2N-205ENST00000550657 CHIC2Q9UKJ5 165 aa13.16□□□□□ -0.3
UBE2N-205ENST00000550657 ABCA5Q8WWZ7 1642 aa13.15□□□□□ -0.3
UBE2N-205ENST00000550657 CFAP43Q8NDM7 1665 aa13.14□□□□□ -0.31
UBE2N-205ENST00000550657 FGD6Q6ZV73 1430 aa13.14□□□□□ -0.31
UBE2N-205ENST00000550657 CTTNBP2Q8WZ74 1663 aa13.14□□□□□ -0.31
UBE2N-205ENST00000550657 RRP7BPQ9NSQ0 103 aa13.13□□□□□ -0.31
UBE2N-205ENST00000550657 AQRO60306 1485 aaKnown RBP eCLIP13.12□□□□□ -0.31
UBE2N-205ENST00000550657 SNAPC4Q5SXM2 1469 aa13.11□□□□□ -0.31
UBE2N-205ENST00000550657 PTPRKQ15262 1439 aa13.11□□□□□ -0.31
UBE2N-205ENST00000550657 PPP1R15AO75807 674 aaPredicted RBP13.1□□□□□ -0.31
UBE2N-205ENST00000550657 TONSLQ96HA7 1378 aa13.1□□□□□ -0.31
UBE2N-205ENST00000550657 TARBP1Q13395 1621 aaKnown RBP13.09□□□□□ -0.31
UBE2N-205ENST00000550657 TRIM52Q96A61 297 aa13.09□□□□□ -0.31
UBE2N-205ENST00000550657 NCOA2Q15596 1464 aa13.08□□□□□ -0.32
UBE2N-205ENST00000550657 CCDC18Q5T9S5 1454 aa13.07□□□□□ -0.32
UBE2N-205ENST00000550657 SUPT16HQ9Y5B9 1047 aaKnown RBP13.06□□□□□ -0.32
UBE2N-205ENST00000550657 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.05□□□□□ -0.32
UBE2N-205ENST00000550657 MYOM3Q5VTT5 1437 aa13.05□□□□□ -0.32
UBE2N-205ENST00000550657 TIMELESSQ9UNS1 1208 aa13.04□□□□□ -0.32
UBE2N-205ENST00000550657 GRIN2BQ13224 1484 aa13.04□□□□□ -0.32
UBE2N-205ENST00000550657 PBRM1Q86U86 1689 aa13.03□□□□□ -0.32
UBE2N-205ENST00000550657 HFM1A2PYH4 1435 aa13.03□□□□□ -0.32
UBE2N-205ENST00000550657 MRC2Q9UBG0 1479 aa13.03□□□□□ -0.32
UBE2N-205ENST00000550657 BCANQ96GW7 911 aa13.02□□□□□ -0.33
UBE2N-205ENST00000550657 ANP32CO43423 234 aa13.02□□□□□ -0.33
UBE2N-205ENST00000550657 NAIPQ13075 1403 aa13.01□□□□□ -0.33
UBE2N-205ENST00000550657 SAMD9Q5K651 1589 aa13.01□□□□□ -0.33
UBE2N-205ENST00000550657 FOXD1Q16676 465 aa13.01□□□□□ -0.33
UBE2N-205ENST00000550657 UACAQ9BZF9 1416 aa13.01□□□□□ -0.33
UBE2N-205ENST00000550657 MAGI3Q5TCQ9 1506 aa12.99□□□□□ -0.33
UBE2N-205ENST00000550657 FBLN2P98095 1184 aa12.99□□□□□ -0.33
UBE2N-205ENST00000550657 CDK13Q14004 1512 aaKnown RBP12.98□□□□□ -0.33
UBE2N-205ENST00000550657 PTPN23Q9H3S7 1636 aa12.97□□□□□ -0.33
UBE2N-205ENST00000550657 EHBP1L1Q8N3D4 1523 aa12.97□□□□□ -0.33
UBE2N-205ENST00000550657 LRRIQ1Q96JM4 1722 aa12.96□□□□□ -0.33
UBE2N-205ENST00000550657 ADAMTS12P58397 1594 aa12.96□□□□□ -0.33
UBE2N-205ENST00000550657 ZNF608Q9ULD9 1512 aaPredicted RBP12.96□□□□□ -0.34
UBE2N-205ENST00000550657 SUPT6HQ7KZ85 1726 aaKnown RBP12.95□□□□□ -0.34
UBE2N-205ENST00000550657 ZNF644Q9H582 1327 aaPredicted RBP12.95□□□□□ -0.34
UBE2N-205ENST00000550657 WDR62O43379 1518 aa12.94□□□□□ -0.34
UBE2N-205ENST00000550657 EPRSP07814 1512 aaKnown RBP12.94□□□□□ -0.34
UBE2N-205ENST00000550657 UGGT2Q9NYU1 1516 aa12.94□□□□□ -0.34
UBE2N-205ENST00000550657 FKBP8Q14318 412 aa12.94□□□□□ -0.34
UBE2N-205ENST00000550657 IQGAP2Q13576 1575 aa12.93□□□□□ -0.34
UBE2N-205ENST00000550657 MPHOSPH9Q99550 1183 aa12.93□□□□□ -0.34
UBE2N-205ENST00000550657 ZNF777Q9ULD5 760 aaPredicted RBP12.92□□□□□ -0.34
UBE2N-205ENST00000550657 IFT140Q96RY7 1462 aa12.91□□□□□ -0.34
UBE2N-205ENST00000550657 HSPA5P11021 654 aaKnown RBP12.91□□□□□ -0.34
UBE2N-205ENST00000550657 THOC2Q8NI27 1593 aaKnown RBP12.9□□□□□ -0.34
UBE2N-205ENST00000550657 HECW1Q76N89 1606 aa12.9□□□□□ -0.34
UBE2N-205ENST00000550657 CHMP7Q8WUX9 453 aaPredicted RBP12.9□□□□□ -0.34
UBE2N-205ENST00000550657 L3MBTL2Q969R5 705 aa12.89□□□□□ -0.35
UBE2N-205ENST00000550657 CCER2I3L3R5 266 aa12.88□□□□□ -0.35
UBE2N-205ENST00000550657 ARHGEF11O15085 1522 aa12.87□□□□□ -0.35
UBE2N-205ENST00000550657 ERCC6Q03468 1493 aa12.87□□□□□ -0.35
UBE2N-205ENST00000550657 SLC4A1APQ9BWU0 796 aaKnown RBP12.87□□□□□ -0.35
UBE2N-205ENST00000550657 CNGB1Q14028 1251 aaPredicted RBP12.86□□□□□ -0.35
UBE2N-205ENST00000550657 CDK11AQ9UQ88 783 aaPredicted RBP12.86□□□□□ -0.35
UBE2N-205ENST00000550657 EIF4G3O43432 1585 aaKnown RBP12.86□□□□□ -0.35
UBE2N-205ENST00000550657 KDM6BO15054 1643 aa12.86□□□□□ -0.35
UBE2N-205ENST00000550657 NEFLP07196 543 aa12.86□□□□□ -0.35
UBE2N-205ENST00000550657 EIF4G2P78344 907 aaKnown RBP eCLIP12.86□□□□□ -0.35
UBE2N-205ENST00000550657 TCOF1Q13428 1488 aaKnown RBP12.85□□□□□ -0.35
UBE2N-205ENST00000550657 WASHC2AQ641Q2 1341 aa12.85□□□□□ -0.35
UBE2N-205ENST00000550657 CFDP1Q9UEE9 299 aaPredicted RBP12.84□□□□□ -0.35
UBE2N-205ENST00000550657 MIA2Q96PC5 1412 aa12.84□□□□□ -0.35
UBE2N-205ENST00000550657 DENND4BO75064 1496 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms