RNA–Protein interactions for RNA: ENST00000550380.5

LINC02407-201, Transcript of long intergenic non-protein coding RNA 2407, humanhuman

TSL 4

Gene LINC02407, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02407-201ENST00000550380 KIAA0586Q9BVV6 1533 aa19.87■□□□□ 0.77
LINC02407-201ENST00000550380 NUP160Q12769 1436 aa19.87■□□□□ 0.77
LINC02407-201ENST00000550380 CHMP7Q8WUX9 453 aaPredicted RBP19.87■□□□□ 0.77
LINC02407-201ENST00000550380 IQGAP2Q13576 1575 aa19.87■□□□□ 0.77
LINC02407-201ENST00000550380 CHD1O14646 1710 aa19.82■□□□□ 0.76
LINC02407-201ENST00000550380 SAMD9Q5K651 1589 aa19.8■□□□□ 0.76
LINC02407-201ENST00000550380 UGGT2Q9NYU1 1516 aa19.8■□□□□ 0.76
LINC02407-201ENST00000550380 CEP170Q5SW79 1584 aa19.78■□□□□ 0.76
LINC02407-201ENST00000550380 ARHGAP35Q9NRY4 1499 aa19.75■□□□□ 0.75
LINC02407-201ENST00000550380 EHMT2Q96KQ7 1210 aa19.74■□□□□ 0.75
LINC02407-201ENST00000550380 VPS8Q8N3P4 1428 aa19.73■□□□□ 0.75
LINC02407-201ENST00000550380 FMN1Q68DA7 1419 aa19.69■□□□□ 0.74
LINC02407-201ENST00000550380 SHROOM2Q13796 1616 aa19.69■□□□□ 0.74
LINC02407-201ENST00000550380 FBLN2P98095 1184 aa19.68■□□□□ 0.74
LINC02407-201ENST00000550380 ARAP1Q96P48 1450 aa19.67■□□□□ 0.74
LINC02407-201ENST00000550380 CARMIL2Q6F5E8 1435 aa19.66■□□□□ 0.74
LINC02407-201ENST00000550380 CLASP1Q7Z460 1538 aa19.66■□□□□ 0.74
LINC02407-201ENST00000550380 KIAA0556O60303 1618 aa19.65■□□□□ 0.74
LINC02407-201ENST00000550380 MAP3K1Q13233 1512 aa19.61■□□□□ 0.73
LINC02407-201ENST00000550380 DISP1Q96F81 1524 aa19.61■□□□□ 0.73
LINC02407-201ENST00000550380 FYCO1Q9BQS8 1478 aa19.6■□□□□ 0.73
LINC02407-201ENST00000550380 JPH4Q96JJ6 628 aa19.58■□□□□ 0.72
LINC02407-201ENST00000550380 CASKIN1Q8WXD9 1431 aa19.57■□□□□ 0.72
LINC02407-201ENST00000550380 FHOD3Q2V2M9 1422 aa19.53■□□□□ 0.72
LINC02407-201ENST00000550380 OSCARQ8IYS5 282 aa19.51■□□□□ 0.71
LINC02407-201ENST00000550380 APLP2Q06481 763 aa19.49■□□□□ 0.71
LINC02407-201ENST00000550380 HECW1Q76N89 1606 aa19.49■□□□□ 0.71
LINC02407-201ENST00000550380 PRG4Q92954 1404 aaPredicted RBP19.49■□□□□ 0.71
LINC02407-201ENST00000550380 CCDC18Q5T9S5 1454 aa19.48■□□□□ 0.71
LINC02407-201ENST00000550380 PCF11O94913 1555 aaKnown RBP19.48■□□□□ 0.71
LINC02407-201ENST00000550380 RANGAP1P46060 587 aaPredicted RBP19.47■□□□□ 0.71
LINC02407-201ENST00000550380 CFAP43Q8NDM7 1665 aa19.46■□□□□ 0.71
LINC02407-201ENST00000550380 TIAM1Q13009 1591 aa19.43■□□□□ 0.7
LINC02407-201ENST00000550380 RAPGEF6Q8TEU7 1601 aa19.43■□□□□ 0.7
LINC02407-201ENST00000550380 ABCA8O94911 1581 aa19.39■□□□□ 0.69
LINC02407-201ENST00000550380 PTPRGP23470 1445 aa19.38■□□□□ 0.69
LINC02407-201ENST00000550380 P3H3Q8IVL6 736 aa19.37■□□□□ 0.69
LINC02407-201ENST00000550380 EPRSP07814 1512 aaKnown RBP19.34■□□□□ 0.69
LINC02407-201ENST00000550380 UHRF1BP1LA0JNW5 1464 aa19.34■□□□□ 0.69
LINC02407-201ENST00000550380 LRRC9Q6ZRR7 1453 aa19.32■□□□□ 0.68
LINC02407-201ENST00000550380 NUP153P49790 1475 aaKnown RBP19.31■□□□□ 0.68
LINC02407-201ENST00000550380 UACAQ9BZF9 1416 aa19.31■□□□□ 0.68
LINC02407-201ENST00000550380 LRRIQ1Q96JM4 1722 aa19.31■□□□□ 0.68
LINC02407-201ENST00000550380 EHBP1L1Q8N3D4 1523 aa19.3■□□□□ 0.68
LINC02407-201ENST00000550380 ABCC2Q92887 1545 aa19.3■□□□□ 0.68
LINC02407-201ENST00000550380 CDK11AQ9UQ88 783 aaPredicted RBP19.28■□□□□ 0.68
LINC02407-201ENST00000550380 PLB1Q6P1J6 1458 aa19.27■□□□□ 0.67
LINC02407-201ENST00000550380 ERCC6L2Q5T890 1561 aa19.27■□□□□ 0.67
LINC02407-201ENST00000550380 SUPT6HQ7KZ85 1726 aaKnown RBP19.23■□□□□ 0.67
LINC02407-201ENST00000550380 TRIM26Q12899 539 aaPredicted RBP19.22■□□□□ 0.67
LINC02407-201ENST00000550380 KDM5BQ9UGL1 1544 aa19.2■□□□□ 0.66
LINC02407-201ENST00000550380 MTUS2Q5JR59 1369 aa19.2■□□□□ 0.66
LINC02407-201ENST00000550380 ARHGEF11O15085 1522 aa19.2■□□□□ 0.66
LINC02407-201ENST00000550380 ADCY10Q96PN6 1610 aa19.19■□□□□ 0.66
LINC02407-201ENST00000550380 ATP1B4Q9UN42 357 aaPredicted RBP19.17■□□□□ 0.66
LINC02407-201ENST00000550380 ATP10BO94823 1461 aa19.16■□□□□ 0.66
LINC02407-201ENST00000550380 TROQ12816 1431 aaPredicted RBP19.16■□□□□ 0.66
LINC02407-201ENST00000550380 CDK13Q14004 1512 aaKnown RBP19.15■□□□□ 0.66
LINC02407-201ENST00000550380 KANK4Q5T7N3 995 aaPredicted RBP19.13■□□□□ 0.65
LINC02407-201ENST00000550380 RRBP1Q9P2E9 1410 aaKnown RBP19.12■□□□□ 0.65
LINC02407-201ENST00000550380 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.12■□□□□ 0.65
LINC02407-201ENST00000550380 RIMBP3CA6NJZ7 1639 aa19.11■□□□□ 0.65
LINC02407-201ENST00000550380 RIMBP3BA6NNM3 1639 aa19.11■□□□□ 0.65
LINC02407-201ENST00000550380 KIF14Q15058 1648 aa19.11■□□□□ 0.65
LINC02407-201ENST00000550380 ZCCHC11Q5TAX3 1644 aaKnown RBP19.11■□□□□ 0.65
LINC02407-201ENST00000550380 RIMBP3Q9UFD9 1639 aa19.11■□□□□ 0.65
LINC02407-201ENST00000550380 MAGI3Q5TCQ9 1506 aa19.1■□□□□ 0.65
LINC02407-201ENST00000550380 NCOA2Q15596 1464 aa19.09■□□□□ 0.65
LINC02407-201ENST00000550380 PLEKHD1A6NEE1 506 aa19.09■□□□□ 0.65
LINC02407-201ENST00000550380 ITSN2Q9NZM3 1697 aa19.08■□□□□ 0.65
LINC02407-201ENST00000550380 MIA2Q96PC5 1412 aa19.07■□□□□ 0.64
LINC02407-201ENST00000550380 MYOM3Q5VTT5 1437 aa19.05■□□□□ 0.64
LINC02407-201ENST00000550380 TTBK1Q5TCY1 1321 aaPredicted RBP19.04■□□□□ 0.64
LINC02407-201ENST00000550380 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.03■□□□□ 0.64
LINC02407-201ENST00000550380 HNRNPUL2Q1KMD3 747 aaKnown RBP19.03■□□□□ 0.64
LINC02407-201ENST00000550380 CCNB3Q8WWL7 1395 aa19.02■□□□□ 0.64
LINC02407-201ENST00000550380 NPM1P06748 294 aaKnown RBP eCLIP19■□□□□ 0.63
LINC02407-201ENST00000550380 PHLDB1Q86UU1 1377 aa19■□□□□ 0.63
LINC02407-201ENST00000550380 MAPKBP1O60336 1514 aa19■□□□□ 0.63
LINC02407-201ENST00000550380 FGD6Q6ZV73 1430 aa19■□□□□ 0.63
LINC02407-201ENST00000550380 WDR7Q9Y4E6 1490 aa18.99■□□□□ 0.63
LINC02407-201ENST00000550380 ARAP3Q8WWN8 1544 aa18.99■□□□□ 0.63
LINC02407-201ENST00000550380 TCOF1Q13428 1488 aaKnown RBP18.97■□□□□ 0.63
LINC02407-201ENST00000550380 ABCC10Q5T3U5 1492 aa18.97■□□□□ 0.63
LINC02407-201ENST00000550380 PPARGC1BQ86YN6 1023 aaKnown RBP18.97■□□□□ 0.63
LINC02407-201ENST00000550380 PREX2Q70Z35 1606 aa18.93■□□□□ 0.62
LINC02407-201ENST00000550380 PTPN23Q9H3S7 1636 aa18.93■□□□□ 0.62
LINC02407-201ENST00000550380 CDC42BPAQ5VT25 1732 aa18.93■□□□□ 0.62
LINC02407-201ENST00000550380 MYO5CQ9NQX4 1742 aa18.93■□□□□ 0.62
LINC02407-201ENST00000550380 GPATCH8Q9UKJ3 1502 aaKnown RBP18.92■□□□□ 0.62
LINC02407-201ENST00000550380 PCGF6Q9BYE7 350 aa18.92■□□□□ 0.62
LINC02407-201ENST00000550380 ABCA9Q8IUA7 1624 aa18.91■□□□□ 0.62
LINC02407-201ENST00000550380 ASXL2Q76L83 1435 aa18.91■□□□□ 0.62
LINC02407-201ENST00000550380 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.9■□□□□ 0.62
LINC02407-201ENST00000550380 ARID3CA6NKF2 412 aa18.88■□□□□ 0.61
LINC02407-201ENST00000550380 PLEKHH2Q8IVE3 1493 aa18.87■□□□□ 0.61
LINC02407-201ENST00000550380 TTC37Q6PGP7 1564 aa18.85■□□□□ 0.61
LINC02407-201ENST00000550380 SENP3Q9H4L4 574 aaPredicted RBP18.85■□□□□ 0.61
LINC02407-201ENST00000550380 GLI2P10070 1586 aa18.85■□□□□ 0.61
LINC02407-201ENST00000550380 PLCH2O75038 1416 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms