RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 SHROOM2Q13796 1616 aa32.31■■■□□ 2.76
DDX54-207ENST00000550016 PRXQ9BXM0 1461 aa32.29■■■□□ 2.76
DDX54-207ENST00000550016 KIAA0586Q9BVV6 1533 aa32.28■■■□□ 2.76
DDX54-207ENST00000550016 FAM9AQ8IZU1 332 aaPredicted RBP32.23■■■□□ 2.75
DDX54-207ENST00000550016 JPH4Q96JJ6 628 aa32.23■■■□□ 2.75
DDX54-207ENST00000550016 ARAP1Q96P48 1450 aa32.17■■■□□ 2.74
DDX54-207ENST00000550016 ERCC6L2Q5T890 1561 aa32.16■■■□□ 2.74
DDX54-207ENST00000550016 CYB5RLQ6IPT4 315 aa32.14■■■□□ 2.74
DDX54-207ENST00000550016 PRG4Q92954 1404 aaPredicted RBP32.14■■■□□ 2.74
DDX54-207ENST00000550016 IQGAP2Q13576 1575 aa32.14■■■□□ 2.74
DDX54-207ENST00000550016 CTTNBP2Q8WZ74 1663 aa32.13■■■□□ 2.73
DDX54-207ENST00000550016 KIF21BO75037 1637 aa32.04■■■□□ 2.72
DDX54-207ENST00000550016 UGGT2Q9NYU1 1516 aa31.96■■■□□ 2.71
DDX54-207ENST00000550016 CARMIL2Q6F5E8 1435 aa31.93■■■□□ 2.7
DDX54-207ENST00000550016 DISP1Q96F81 1524 aa31.87■■■□□ 2.69
DDX54-207ENST00000550016 GOLGA3Q08378 1498 aa31.84■■■□□ 2.69
DDX54-207ENST00000550016 KIAA0556O60303 1618 aa31.82■■■□□ 2.68
DDX54-207ENST00000550016 TNIKQ9UKE5 1360 aa31.81■■■□□ 2.68
DDX54-207ENST00000550016 EHMT2Q96KQ7 1210 aa31.79■■■□□ 2.68
DDX54-207ENST00000550016 PTPRGP23470 1445 aa31.78■■■□□ 2.68
DDX54-207ENST00000550016 UBTFP17480 764 aaKnown RBP31.77■■■□□ 2.68
DDX54-207ENST00000550016 TTBK1Q5TCY1 1321 aaPredicted RBP31.72■■■□□ 2.67
DDX54-207ENST00000550016 SAMD9Q5K651 1589 aa31.67■■■□□ 2.66
DDX54-207ENST00000550016 ADCY10Q96PN6 1610 aa31.65■■■□□ 2.66
DDX54-207ENST00000550016 RANGAP1P46060 587 aaPredicted RBP31.63■■■□□ 2.65
DDX54-207ENST00000550016 P3H3Q8IVL6 736 aa31.6■■■□□ 2.65
DDX54-207ENST00000550016 UACAQ9BZF9 1416 aa31.57■■■□□ 2.64
DDX54-207ENST00000550016 EFCAB5A4FU69 1503 aa31.55■■■□□ 2.64
DDX54-207ENST00000550016 NPM1P06748 294 aaKnown RBP eCLIP31.55■■■□□ 2.64
DDX54-207ENST00000550016 UHRF1BP1LA0JNW5 1464 aa31.54■■■□□ 2.64
DDX54-207ENST00000550016 ABCC2Q92887 1545 aa31.51■■■□□ 2.63
DDX54-207ENST00000550016 ABCA8O94911 1581 aa31.47■■■□□ 2.63
DDX54-207ENST00000550016 PLB1Q6P1J6 1458 aa31.46■■■□□ 2.63
DDX54-207ENST00000550016 FHOD3Q2V2M9 1422 aa31.45■■■□□ 2.63
DDX54-207ENST00000550016 TRHP20396 242 aaPredicted RBP31.43■■■□□ 2.62
DDX54-207ENST00000550016 ARHGAP35Q9NRY4 1499 aa31.4■■■□□ 2.62
DDX54-207ENST00000550016 MAPKBP1O60336 1514 aa31.4■■■□□ 2.62
DDX54-207ENST00000550016 KDM5BQ9UGL1 1544 aa31.39■■■□□ 2.61
DDX54-207ENST00000550016 ZCCHC11Q5TAX3 1644 aaKnown RBP31.36■■■□□ 2.61
DDX54-207ENST00000550016 RAPGEF6Q8TEU7 1601 aa31.35■■■□□ 2.61
DDX54-207ENST00000550016 LOC105371045A0A1W2PR82 267 aa31.32■■■□□ 2.6
DDX54-207ENST00000550016 KIF13AQ9H1H9 1805 aa31.29■■■□□ 2.6
DDX54-207ENST00000550016 CLIP1P30622 1438 aa31.27■■■□□ 2.6
DDX54-207ENST00000550016 FMN1Q68DA7 1419 aa31.25■■■□□ 2.59
DDX54-207ENST00000550016 ASXL2Q76L83 1435 aa31.25■■■□□ 2.59
DDX54-207ENST00000550016 ABCC10Q5T3U5 1492 aa31.23■■■□□ 2.59
DDX54-207ENST00000550016 ATP10BO94823 1461 aa31.21■■■□□ 2.59
DDX54-207ENST00000550016 DIP2BQ9P265 1576 aa31.2■■■□□ 2.58
DDX54-207ENST00000550016 NUP153P49790 1475 aaKnown RBP31.2■■■□□ 2.58
DDX54-207ENST00000550016 ARID3CA6NKF2 412 aa31.17■■■□□ 2.58
DDX54-207ENST00000550016 FAM69CQ0P6D2 419 aa31.17■■■□□ 2.58
DDX54-207ENST00000550016 CEP162Q5TB80 1403 aa31.16■■■□□ 2.58
DDX54-207ENST00000550016 WDR7Q9Y4E6 1490 aa31.12■■■□□ 2.57
DDX54-207ENST00000550016 HECW1Q76N89 1606 aa31.1■■■□□ 2.57
DDX54-207ENST00000550016 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.08■■■□□ 2.57
DDX54-207ENST00000550016 HNRNPUL2Q1KMD3 747 aaKnown RBP31.08■■■□□ 2.57
DDX54-207ENST00000550016 GLI2P10070 1586 aa31.08■■■□□ 2.57
DDX54-207ENST00000550016 ATP1B4Q9UN42 357 aaPredicted RBP31.07■■■□□ 2.56
DDX54-207ENST00000550016 EPRSP07814 1512 aaKnown RBP31.07■■■□□ 2.56
DDX54-207ENST00000550016 TSPOAP1O95153 1857 aa31.04■■■□□ 2.56
DDX54-207ENST00000550016 CASKIN1Q8WXD9 1431 aa31.03■■■□□ 2.56
DDX54-207ENST00000550016 PCF11O94913 1555 aaKnown RBP31.02■■■□□ 2.56
DDX54-207ENST00000550016 LRRIQ1Q96JM4 1722 aa31.01■■■□□ 2.56
DDX54-207ENST00000550016 CDK13Q14004 1512 aaKnown RBP31■■■□□ 2.55
DDX54-207ENST00000550016 KCNH8Q96L42 1107 aa31■■■□□ 2.55
DDX54-207ENST00000550016 PLEKHD1A6NEE1 506 aa30.97■■■□□ 2.55
DDX54-207ENST00000550016 FYCO1Q9BQS8 1478 aa30.96■■■□□ 2.55
DDX54-207ENST00000550016 MAP3K4Q9Y6R4 1608 aa30.95■■■□□ 2.55
DDX54-207ENST00000550016 CFAP43Q8NDM7 1665 aa30.91■■■□□ 2.54
DDX54-207ENST00000550016 CCDC18Q5T9S5 1454 aa30.89■■■□□ 2.54
DDX54-207ENST00000550016 PPRC1Q5VV67 1664 aaKnown RBP30.88■■■□□ 2.53
DDX54-207ENST00000550016 CDK11AQ9UQ88 783 aaPredicted RBP30.88■■■□□ 2.53
DDX54-207ENST00000550016 ABCA9Q8IUA7 1624 aa30.85■■■□□ 2.53
DDX54-207ENST00000550016 CD109Q6YHK3 1445 aa30.83■■■□□ 2.53
DDX54-207ENST00000550016 VPS8Q8N3P4 1428 aa30.78■■■□□ 2.52
DDX54-207ENST00000550016 TEX14Q8IWB6 1497 aa30.77■■■□□ 2.52
DDX54-207ENST00000550016 TROQ12816 1431 aaPredicted RBP30.76■■■□□ 2.51
DDX54-207ENST00000550016 MAGI3Q5TCQ9 1506 aa30.76■■■□□ 2.51
DDX54-207ENST00000550016 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.73■■■□□ 2.51
DDX54-207ENST00000550016 KIF14Q15058 1648 aa30.69■■■□□ 2.5
DDX54-207ENST00000550016 TTC37Q6PGP7 1564 aa30.69■■■□□ 2.5
DDX54-207ENST00000550016 KDM6BO15054 1643 aa30.67■■■□□ 2.5
DDX54-207ENST00000550016 MYO5CQ9NQX4 1742 aa30.61■■■□□ 2.49
DDX54-207ENST00000550016 MTUS2Q5JR59 1369 aa30.59■■■□□ 2.49
DDX54-207ENST00000550016 TIAM1Q13009 1591 aa30.58■■■□□ 2.49
DDX54-207ENST00000550016 PHLDB1Q86UU1 1377 aa30.56■■■□□ 2.48
DDX54-207ENST00000550016 NEO1Q92859 1461 aa30.56■■■□□ 2.48
DDX54-207ENST00000550016 PLCH2O75038 1416 aa30.56■■■□□ 2.48
DDX54-207ENST00000550016 CFAP74Q9C0B2 1584 aa30.54■■■□□ 2.48
DDX54-207ENST00000550016 MAP3K1Q13233 1512 aa30.53■■■□□ 2.48
DDX54-207ENST00000550016 COL17A1Q9UMD9 1497 aaPredicted RBP30.53■■■□□ 2.48
DDX54-207ENST00000550016 EHBP1L1Q8N3D4 1523 aa30.52■■■□□ 2.48
DDX54-207ENST00000550016 FANCAO15360 1455 aa30.51■■■□□ 2.48
DDX54-207ENST00000550016 ARAP3Q8WWN8 1544 aa30.51■■■□□ 2.47
DDX54-207ENST00000550016 CDC42BPBQ9Y5S2 1711 aa30.5■■■□□ 2.47
DDX54-207ENST00000550016 CDC42BPAQ5VT25 1732 aa30.49■■■□□ 2.47
DDX54-207ENST00000550016 APLP2Q06481 763 aa30.46■■■□□ 2.47
DDX54-207ENST00000550016 PREX2Q70Z35 1606 aa30.46■■■□□ 2.47
DDX54-207ENST00000550016 AKNAQ7Z591 1439 aa30.46■■■□□ 2.47
DDX54-207ENST00000550016 EFCAB2Q5VUJ9 269 aa30.45■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms