RNA–Protein interactions for RNA: ENST00000548897.1

TTC41P-204, Transcript of tetratricopeptide repeat domain 41, pseudogene, humanhuman

TSL 5 BASIC

Gene TTC41P, Length 2,998 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41P-204ENST00000548897 ABCA10Q8WWZ4 1543 aa11.87□□□□□ -0.51
TTC41P-204ENST00000548897 ZNF316A6NFI3 1004 aaPredicted RBP11.85□□□□□ -0.51
TTC41P-204ENST00000548897 CCNB3Q8WWL7 1395 aa11.84□□□□□ -0.51
TTC41P-204ENST00000548897 RRBP1Q9P2E9 1410 aaKnown RBP11.83□□□□□ -0.52
TTC41P-204ENST00000548897 PCF11O94913 1555 aaKnown RBP11.83□□□□□ -0.52
TTC41P-204ENST00000548897 LAMC3Q9Y6N6 1575 aa11.83□□□□□ -0.52
TTC41P-204ENST00000548897 DHX57Q6P158 1386 aaKnown RBP11.83□□□□□ -0.52
TTC41P-204ENST00000548897 TIAM1Q13009 1591 aa11.82□□□□□ -0.52
TTC41P-204ENST00000548897 SCAF1Q9H7N4 1312 aaKnown RBP11.82□□□□□ -0.52
TTC41P-204ENST00000548897 KIF21AQ7Z4S6 1674 aa11.82□□□□□ -0.52
TTC41P-204ENST00000548897 FAM50AQ14320 339 aaKnown RBP11.82□□□□□ -0.52
TTC41P-204ENST00000548897 PHLDB1Q86UU1 1377 aa11.81□□□□□ -0.52
TTC41P-204ENST00000548897 PDS5BQ9NTI5 1447 aa11.79□□□□□ -0.52
TTC41P-204ENST00000548897 LRRC9Q6ZRR7 1453 aa11.79□□□□□ -0.52
TTC41P-204ENST00000548897 YTHDC1Q96MU7 727 aaKnown RBP11.79□□□□□ -0.52
TTC41P-204ENST00000548897 NEUROD1Q13562 356 aa11.77□□□□□ -0.52
TTC41P-204ENST00000548897 GAPVD1Q14C86 1478 aa11.77□□□□□ -0.53
TTC41P-204ENST00000548897 WDR97A6NE52 1622 aa11.76□□□□□ -0.53
TTC41P-204ENST00000548897 FHAD1B1AJZ9 1412 aa11.76□□□□□ -0.53
TTC41P-204ENST00000548897 CUL7Q14999 1698 aa11.75□□□□□ -0.53
TTC41P-204ENST00000548897 RAB3GAP2Q9H2M9 1393 aa11.74□□□□□ -0.53
TTC41P-204ENST00000548897 ABCA5Q8WWZ7 1642 aa11.74□□□□□ -0.53
TTC41P-204ENST00000548897 ARID3CA6NKF2 412 aa11.74□□□□□ -0.53
TTC41P-204ENST00000548897 MIER1Q8N108 512 aa11.74□□□□□ -0.53
TTC41P-204ENST00000548897 CTTNBP2Q8WZ74 1663 aa11.74□□□□□ -0.53
TTC41P-204ENST00000548897 AQRO60306 1485 aaKnown RBP eCLIP11.73□□□□□ -0.53
TTC41P-204ENST00000548897 CFAP43Q8NDM7 1665 aa11.71□□□□□ -0.53
TTC41P-204ENST00000548897 ACIN1Q9UKV3 1341 aaKnown RBP11.7□□□□□ -0.54
TTC41P-204ENST00000548897 CASKIN1Q8WXD9 1431 aa11.7□□□□□ -0.54
TTC41P-204ENST00000548897 FYCO1Q9BQS8 1478 aa11.7□□□□□ -0.54
TTC41P-204ENST00000548897 EFCAB5A4FU69 1503 aa11.7□□□□□ -0.54
TTC41P-204ENST00000548897 MAP3K1Q13233 1512 aa11.69□□□□□ -0.54
TTC41P-204ENST00000548897 TARBP1Q13395 1621 aaKnown RBP11.69□□□□□ -0.54
TTC41P-204ENST00000548897 SNAPC4Q5SXM2 1469 aa11.67□□□□□ -0.54
TTC41P-204ENST00000548897 MTUS2Q5JR59 1369 aa11.67□□□□□ -0.54
TTC41P-204ENST00000548897 SIN3AQ96ST3 1273 aa11.66□□□□□ -0.54
TTC41P-204ENST00000548897 FMN1Q68DA7 1419 aa11.66□□□□□ -0.54
TTC41P-204ENST00000548897 SETD5Q9C0A6 1442 aa11.66□□□□□ -0.54
TTC41P-204ENST00000548897 ZNF608Q9ULD9 1512 aaPredicted RBP11.65□□□□□ -0.54
TTC41P-204ENST00000548897 CLSPNQ9HAW4 1339 aa11.65□□□□□ -0.54
TTC41P-204ENST00000548897 MAPKBP1O60336 1514 aa11.65□□□□□ -0.54
TTC41P-204ENST00000548897 LRRIQ1Q96JM4 1722 aa11.64□□□□□ -0.55
TTC41P-204ENST00000548897 MRC2Q9UBG0 1479 aa11.63□□□□□ -0.55
TTC41P-204ENST00000548897 CENPBP07199 599 aaPredicted RBP11.63□□□□□ -0.55
TTC41P-204ENST00000548897 SAMD9Q5K651 1589 aa11.63□□□□□ -0.55
TTC41P-204ENST00000548897 GTF3C3Q9Y5Q9 886 aa11.63□□□□□ -0.55
TTC41P-204ENST00000548897 PBRM1Q86U86 1689 aa11.63□□□□□ -0.55
TTC41P-204ENST00000548897 FGD6Q6ZV73 1430 aa11.61□□□□□ -0.55
TTC41P-204ENST00000548897 GRIN2BQ13224 1484 aa11.6□□□□□ -0.55
TTC41P-204ENST00000548897 PTPRKQ15262 1439 aa11.59□□□□□ -0.55
TTC41P-204ENST00000548897 ADAMTS12P58397 1594 aa11.58□□□□□ -0.55
TTC41P-204ENST00000548897 NCOA2Q15596 1464 aa11.58□□□□□ -0.55
TTC41P-204ENST00000548897 MAGI3Q5TCQ9 1506 aa11.58□□□□□ -0.55
TTC41P-204ENST00000548897 CHIC2Q9UKJ5 165 aa11.58□□□□□ -0.56
TTC41P-204ENST00000548897 HIRIP3Q9BW71 556 aaPredicted RBP11.58□□□□□ -0.56
TTC41P-204ENST00000548897 CDK13Q14004 1512 aaKnown RBP11.57□□□□□ -0.56
TTC41P-204ENST00000548897 FBLN2P98095 1184 aa11.57□□□□□ -0.56
TTC41P-204ENST00000548897 IQGAP2Q13576 1575 aa11.57□□□□□ -0.56
TTC41P-204ENST00000548897 ERCC6Q03468 1493 aa11.56□□□□□ -0.56
TTC41P-204ENST00000548897 PIAS4Q8N2W9 510 aaPredicted RBP11.55□□□□□ -0.56
TTC41P-204ENST00000548897 RRP7BPQ9NSQ0 103 aa11.54□□□□□ -0.56
TTC41P-204ENST00000548897 MYOM3Q5VTT5 1437 aa11.54□□□□□ -0.56
TTC41P-204ENST00000548897 CCDC18Q5T9S5 1454 aa11.52□□□□□ -0.57
TTC41P-204ENST00000548897 IFT140Q96RY7 1462 aa11.52□□□□□ -0.57
TTC41P-204ENST00000548897 WDR62O43379 1518 aa11.51□□□□□ -0.57
TTC41P-204ENST00000548897 EHBP1L1Q8N3D4 1523 aa11.51□□□□□ -0.57
TTC41P-204ENST00000548897 SUPT6HQ7KZ85 1726 aaKnown RBP11.51□□□□□ -0.57
TTC41P-204ENST00000548897 EIF4G3O43432 1585 aaKnown RBP11.51□□□□□ -0.57
TTC41P-204ENST00000548897 EPRSP07814 1512 aaKnown RBP11.51□□□□□ -0.57
TTC41P-204ENST00000548897 THOC2Q8NI27 1593 aaKnown RBP11.49□□□□□ -0.57
TTC41P-204ENST00000548897 UGGT2Q9NYU1 1516 aa11.49□□□□□ -0.57
TTC41P-204ENST00000548897 HECW1Q76N89 1606 aa11.49□□□□□ -0.57
TTC41P-204ENST00000548897 PTPN23Q9H3S7 1636 aa11.49□□□□□ -0.57
TTC41P-204ENST00000548897 KCNH8Q96L42 1107 aa11.49□□□□□ -0.57
TTC41P-204ENST00000548897 NAIPQ13075 1403 aa11.48□□□□□ -0.57
TTC41P-204ENST00000548897 CHMP7Q8WUX9 453 aaPredicted RBP11.48□□□□□ -0.57
TTC41P-204ENST00000548897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.48□□□□□ -0.57
TTC41P-204ENST00000548897 HFM1A2PYH4 1435 aa11.47□□□□□ -0.57
TTC41P-204ENST00000548897 GRIN2AQ12879 1464 aa11.47□□□□□ -0.57
TTC41P-204ENST00000548897 DDX10Q13206 875 aaKnown RBP11.46□□□□□ -0.57
TTC41P-204ENST00000548897 DISP1Q96F81 1524 aa11.46□□□□□ -0.57
TTC41P-204ENST00000548897 ZNF644Q9H582 1327 aaPredicted RBP11.46□□□□□ -0.57
TTC41P-204ENST00000548897 TRIM52Q96A61 297 aa11.46□□□□□ -0.57
TTC41P-204ENST00000548897 KIAA0556O60303 1618 aa11.44□□□□□ -0.58
TTC41P-204ENST00000548897 ARHGEF11O15085 1522 aa11.44□□□□□ -0.58
TTC41P-204ENST00000548897 KIAA0586Q9BVV6 1533 aa11.44□□□□□ -0.58
TTC41P-204ENST00000548897 TONSLQ96HA7 1378 aa11.44□□□□□ -0.58
TTC41P-204ENST00000548897 KDM6BO15054 1643 aa11.44□□□□□ -0.58
TTC41P-204ENST00000548897 UACAQ9BZF9 1416 aa11.43□□□□□ -0.58
TTC41P-204ENST00000548897 PPP1R15AO75807 674 aaPredicted RBP11.43□□□□□ -0.58
TTC41P-204ENST00000548897 NUP153P49790 1475 aaKnown RBP11.43□□□□□ -0.58
TTC41P-204ENST00000548897 PLB1Q6P1J6 1458 aa11.42□□□□□ -0.58
TTC41P-204ENST00000548897 CEP170Q5SW79 1584 aa11.41□□□□□ -0.58
TTC41P-204ENST00000548897 PRG4Q92954 1404 aaPredicted RBP11.4□□□□□ -0.58
TTC41P-204ENST00000548897 ZNF777Q9ULD5 760 aaPredicted RBP11.4□□□□□ -0.58
TTC41P-204ENST00000548897 TCOF1Q13428 1488 aaKnown RBP11.38□□□□□ -0.59
TTC41P-204ENST00000548897 RAPGEF6Q8TEU7 1601 aa11.38□□□□□ -0.59
TTC41P-204ENST00000548897 SYNJ2O15056 1496 aa11.37□□□□□ -0.59
TTC41P-204ENST00000548897 DENND4BO75064 1496 aaPredicted RBP11.37□□□□□ -0.59
TTC41P-204ENST00000548897 KCNA4P22459 653 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms