RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 CTTNBP2Q8WZ74 1663 aa34.59■■■■□ 3.13
CACNB3-210ENST00000548874 SHROOM2Q13796 1616 aa34.56■■■■□ 3.12
CACNB3-210ENST00000548874 IQGAP2Q13576 1575 aa34.56■■■■□ 3.12
CACNB3-210ENST00000548874 DNAJC5Q9H3Z4 198 aa34.52■■■■□ 3.12
CACNB3-210ENST00000548874 EHMT2Q96KQ7 1210 aa34.49■■■■□ 3.11
CACNB3-210ENST00000548874 JPH4Q96JJ6 628 aa34.48■■■■□ 3.11
CACNB3-210ENST00000548874 UBTFP17480 764 aaKnown RBP34.45■■■■□ 3.11
CACNB3-210ENST00000548874 UGGT2Q9NYU1 1516 aa34.42■■■■□ 3.1
CACNB3-210ENST00000548874 ARHGEF11O15085 1522 aa34.39■■■■□ 3.1
CACNB3-210ENST00000548874 PRG4Q92954 1404 aaPredicted RBP34.38■■■■□ 3.09
CACNB3-210ENST00000548874 ERCC6L2Q5T890 1561 aa34.34■■■■□ 3.09
CACNB3-210ENST00000548874 TNIKQ9UKE5 1360 aa34.34■■■■□ 3.09
CACNB3-210ENST00000548874 RIMBP3CA6NJZ7 1639 aa34.32■■■■□ 3.08
CACNB3-210ENST00000548874 RIMBP3BA6NNM3 1639 aa34.32■■■■□ 3.08
CACNB3-210ENST00000548874 RIMBP3Q9UFD9 1639 aa34.32■■■■□ 3.08
CACNB3-210ENST00000548874 LOC105371045A0A1W2PR82 267 aa34.3■■■■□ 3.08
CACNB3-210ENST00000548874 DISP1Q96F81 1524 aa34.3■■■■□ 3.08
CACNB3-210ENST00000548874 CARMIL2Q6F5E8 1435 aa34.25■■■■□ 3.07
CACNB3-210ENST00000548874 KIAA0556O60303 1618 aa34.23■■■■□ 3.07
CACNB3-210ENST00000548874 SAMD9Q5K651 1589 aa34.22■■■■□ 3.07
CACNB3-210ENST00000548874 ARAP1Q96P48 1450 aa34.17■■■■□ 3.06
CACNB3-210ENST00000548874 EFCAB5A4FU69 1503 aa34.16■■■■□ 3.06
CACNB3-210ENST00000548874 RANGAP1P46060 587 aaPredicted RBP34.13■■■■□ 3.05
CACNB3-210ENST00000548874 ARHGAP35Q9NRY4 1499 aa34.08■■■■□ 3.05
CACNB3-210ENST00000548874 CLIP1P30622 1438 aa34.04■■■■□ 3.04
CACNB3-210ENST00000548874 PTPRGP23470 1445 aa34.04■■■■□ 3.04
CACNB3-210ENST00000548874 CEP162Q5TB80 1403 aa34.04■■■■□ 3.04
CACNB3-210ENST00000548874 P3H3Q8IVL6 736 aa34.03■■■■□ 3.04
CACNB3-210ENST00000548874 FHOD3Q2V2M9 1422 aa34.01■■■■□ 3.03
CACNB3-210ENST00000548874 CYB5RLQ6IPT4 315 aa33.98■■■■□ 3.03
CACNB3-210ENST00000548874 TTBK1Q5TCY1 1321 aaPredicted RBP33.91■■■■□ 3.02
CACNB3-210ENST00000548874 UACAQ9BZF9 1416 aa33.85■■■■□ 3.01
CACNB3-210ENST00000548874 ABCA8O94911 1581 aa33.84■■■■□ 3.01
CACNB3-210ENST00000548874 PLB1Q6P1J6 1458 aa33.82■■■■□ 3.01
CACNB3-210ENST00000548874 FMN1Q68DA7 1419 aa33.82■■■■□ 3
CACNB3-210ENST00000548874 UHRF1BP1LA0JNW5 1464 aa33.82■■■■□ 3
CACNB3-210ENST00000548874 ADCY10Q96PN6 1610 aa33.8■■■■□ 3
CACNB3-210ENST00000548874 ABCC2Q92887 1545 aa33.79■■■■□ 3
CACNB3-210ENST00000548874 RAPGEF6Q8TEU7 1601 aa33.75■■■□□ 2.99
CACNB3-210ENST00000548874 KDM5BQ9UGL1 1544 aa33.65■■■□□ 2.98
CACNB3-210ENST00000548874 NUP153P49790 1475 aaKnown RBP33.65■■■□□ 2.98
CACNB3-210ENST00000548874 CASKIN1Q8WXD9 1431 aa33.63■■■□□ 2.97
CACNB3-210ENST00000548874 PCF11O94913 1555 aaKnown RBP33.63■■■□□ 2.97
CACNB3-210ENST00000548874 VPS8Q8N3P4 1428 aa33.6■■■□□ 2.97
CACNB3-210ENST00000548874 HECW1Q76N89 1606 aa33.6■■■□□ 2.97
CACNB3-210ENST00000548874 FYCO1Q9BQS8 1478 aa33.58■■■□□ 2.97
CACNB3-210ENST00000548874 ZCCHC11Q5TAX3 1644 aaKnown RBP33.55■■■□□ 2.96
CACNB3-210ENST00000548874 ATP10BO94823 1461 aa33.55■■■□□ 2.96
CACNB3-210ENST00000548874 NPM1P06748 294 aaKnown RBP eCLIP33.54■■■□□ 2.96
CACNB3-210ENST00000548874 MAPKBP1O60336 1514 aa33.49■■■□□ 2.95
CACNB3-210ENST00000548874 EPRSP07814 1512 aaKnown RBP33.49■■■□□ 2.95
CACNB3-210ENST00000548874 ARID3CA6NKF2 412 aa33.47■■■□□ 2.95
CACNB3-210ENST00000548874 LRRIQ1Q96JM4 1722 aa33.47■■■□□ 2.95
CACNB3-210ENST00000548874 ATP1B4Q9UN42 357 aaPredicted RBP33.46■■■□□ 2.95
CACNB3-210ENST00000548874 CDK13Q14004 1512 aaKnown RBP33.44■■■□□ 2.94
CACNB3-210ENST00000548874 CCDC18Q5T9S5 1454 aa33.43■■■□□ 2.94
CACNB3-210ENST00000548874 ASXL2Q76L83 1435 aa33.4■■■□□ 2.94
CACNB3-210ENST00000548874 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.34■■■□□ 2.93
CACNB3-210ENST00000548874 HNRNPUL2Q1KMD3 747 aaKnown RBP33.34■■■□□ 2.93
CACNB3-210ENST00000548874 WDR7Q9Y4E6 1490 aa33.33■■■□□ 2.93
CACNB3-210ENST00000548874 CFAP43Q8NDM7 1665 aa33.27■■■□□ 2.92
CACNB3-210ENST00000548874 PLEKHD1A6NEE1 506 aa33.26■■■□□ 2.91
CACNB3-210ENST00000548874 MAP3K1Q13233 1512 aa33.26■■■□□ 2.91
CACNB3-210ENST00000548874 CDK11AQ9UQ88 783 aaPredicted RBP33.25■■■□□ 2.91
CACNB3-210ENST00000548874 TIAM1Q13009 1591 aa33.25■■■□□ 2.91
CACNB3-210ENST00000548874 ABCC10Q5T3U5 1492 aa33.25■■■□□ 2.91
CACNB3-210ENST00000548874 MAGI3Q5TCQ9 1506 aa33.23■■■□□ 2.91
CACNB3-210ENST00000548874 DIP2BQ9P265 1576 aa33.21■■■□□ 2.91
CACNB3-210ENST00000548874 TROQ12816 1431 aaPredicted RBP33.2■■■□□ 2.91
CACNB3-210ENST00000548874 GLI2P10070 1586 aa33.16■■■□□ 2.9
CACNB3-210ENST00000548874 KIF13AQ9H1H9 1805 aa33.14■■■□□ 2.9
CACNB3-210ENST00000548874 KCNH8Q96L42 1107 aa33.13■■■□□ 2.89
CACNB3-210ENST00000548874 APLP2Q06481 763 aa33.11■■■□□ 2.89
CACNB3-210ENST00000548874 EHBP1L1Q8N3D4 1523 aa33.11■■■□□ 2.89
CACNB3-210ENST00000548874 MTUS2Q5JR59 1369 aa33.1■■■□□ 2.89
CACNB3-210ENST00000548874 LRRC9Q6ZRR7 1453 aa33.1■■■□□ 2.89
CACNB3-210ENST00000548874 FAM69CQ0P6D2 419 aa33.09■■■□□ 2.89
CACNB3-210ENST00000548874 KIF14Q15058 1648 aa33.07■■■□□ 2.88
CACNB3-210ENST00000548874 ABCA9Q8IUA7 1624 aa33.06■■■□□ 2.88
CACNB3-210ENST00000548874 TRHP20396 242 aaPredicted RBP33.05■■■□□ 2.88
CACNB3-210ENST00000548874 KANK4Q5T7N3 995 aaPredicted RBP33.05■■■□□ 2.88
CACNB3-210ENST00000548874 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.04■■■□□ 2.88
CACNB3-210ENST00000548874 MAP3K4Q9Y6R4 1608 aa33.02■■■□□ 2.88
CACNB3-210ENST00000548874 TTC37Q6PGP7 1564 aa33■■■□□ 2.87
CACNB3-210ENST00000548874 CD109Q6YHK3 1445 aa32.94■■■□□ 2.86
CACNB3-210ENST00000548874 SUPT6HQ7KZ85 1726 aaKnown RBP32.94■■■□□ 2.86
CACNB3-210ENST00000548874 NCOA2Q15596 1464 aa32.91■■■□□ 2.86
CACNB3-210ENST00000548874 PPRC1Q5VV67 1664 aaKnown RBP32.89■■■□□ 2.86
CACNB3-210ENST00000548874 MYO5CQ9NQX4 1742 aa32.85■■■□□ 2.85
CACNB3-210ENST00000548874 PLCH2O75038 1416 aa32.85■■■□□ 2.85
CACNB3-210ENST00000548874 ARAP3Q8WWN8 1544 aa32.84■■■□□ 2.85
CACNB3-210ENST00000548874 TSPOAP1O95153 1857 aa32.84■■■□□ 2.85
CACNB3-210ENST00000548874 GPATCH8Q9UKJ3 1502 aaKnown RBP32.82■■■□□ 2.85
CACNB3-210ENST00000548874 CDC42BPAQ5VT25 1732 aa32.82■■■□□ 2.84
CACNB3-210ENST00000548874 PREX2Q70Z35 1606 aa32.81■■■□□ 2.84
CACNB3-210ENST00000548874 CCNB3Q8WWL7 1395 aa32.81■■■□□ 2.84
CACNB3-210ENST00000548874 TEX14Q8IWB6 1497 aa32.8■■■□□ 2.84
CACNB3-210ENST00000548874 CDC42BPBQ9Y5S2 1711 aa32.77■■■□□ 2.84
CACNB3-210ENST00000548874 ITSN2Q9NZM3 1697 aa32.75■■■□□ 2.83
CACNB3-210ENST00000548874 PPARGC1BQ86YN6 1023 aaKnown RBP32.73■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms