RNA–Protein interactions for RNA: ENST00000548283.6

TMEM116-206, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 3,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-206ENST00000548283 CEP162Q5TB80 1403 aa11.69□□□□□ -0.54
TMEM116-206ENST00000548283 MAGI1Q96QZ7 1491 aaPredicted RBP11.68□□□□□ -0.54
TMEM116-206ENST00000548283 GRIN2BQ13224 1484 aa11.67□□□□□ -0.54
TMEM116-206ENST00000548283 ARAP1Q96P48 1450 aa11.67□□□□□ -0.54
TMEM116-206ENST00000548283 CFAP43Q8NDM7 1665 aa11.67□□□□□ -0.54
TMEM116-206ENST00000548283 AQRO60306 1485 aaKnown RBP eCLIP11.66□□□□□ -0.548e-7■■■■■ 28.7
TMEM116-206ENST00000548283 FHAD1B1AJZ9 1412 aa11.65□□□□□ -0.54
TMEM116-206ENST00000548283 UGGT2Q9NYU1 1516 aa11.65□□□□□ -0.55
TMEM116-206ENST00000548283 CARMIL1Q5VZK9 1371 aa11.62□□□□□ -0.55
TMEM116-206ENST00000548283 ARHGAP35Q9NRY4 1499 aa11.62□□□□□ -0.55
TMEM116-206ENST00000548283 LRRIQ1Q96JM4 1722 aa11.61□□□□□ -0.55
TMEM116-206ENST00000548283 LOC105371045A0A1W2PR82 267 aa11.61□□□□□ -0.55
TMEM116-206ENST00000548283 CLASP1Q7Z460 1538 aa11.61□□□□□ -0.55
TMEM116-206ENST00000548283 ERICH6Q7L0X2 663 aa11.6□□□□□ -0.55
TMEM116-206ENST00000548283 ZNF608Q9ULD9 1512 aaPredicted RBP11.6□□□□□ -0.55
TMEM116-206ENST00000548283 VPS8Q8N3P4 1428 aa11.59□□□□□ -0.55
TMEM116-206ENST00000548283 NUP160Q12769 1436 aa11.58□□□□□ -0.56
TMEM116-206ENST00000548283 PPARGC1BQ86YN6 1023 aaKnown RBP11.58□□□□□ -0.56
TMEM116-206ENST00000548283 CEP170Q5SW79 1584 aa11.57□□□□□ -0.56
TMEM116-206ENST00000548283 IQGAP2Q13576 1575 aa11.57□□□□□ -0.56
TMEM116-206ENST00000548283 SYNJ2O15056 1496 aa11.57□□□□□ -0.56
TMEM116-206ENST00000548283 SNAPC4Q5SXM2 1469 aa11.56□□□□□ -0.56
TMEM116-206ENST00000548283 ERCC6Q03468 1493 aa11.55□□□□□ -0.56
TMEM116-206ENST00000548283 GRIN2AQ12879 1464 aa11.55□□□□□ -0.56
TMEM116-206ENST00000548283 CLIP1P30622 1438 aa11.55□□□□□ -0.56
TMEM116-206ENST00000548283 PELP1Q8IZL8 1130 aaKnown RBP11.54□□□□□ -0.56
TMEM116-206ENST00000548283 KIAA0556O60303 1618 aa11.52□□□□□ -0.57
TMEM116-206ENST00000548283 KIAA0586Q9BVV6 1533 aa11.52□□□□□ -0.57
TMEM116-206ENST00000548283 FYCO1Q9BQS8 1478 aa11.52□□□□□ -0.57
TMEM116-206ENST00000548283 CHD1O14646 1710 aa11.52□□□□□ -0.57
TMEM116-206ENST00000548283 TIAM1Q13009 1591 aa11.5□□□□□ -0.57
TMEM116-206ENST00000548283 ARHGEF11O15085 1522 aa11.5□□□□□ -0.57
TMEM116-206ENST00000548283 DISP1Q96F81 1524 aa11.49□□□□□ -0.57
TMEM116-206ENST00000548283 PCF11O94913 1555 aaKnown RBP11.49□□□□□ -0.57
TMEM116-206ENST00000548283 APLP2Q06481 763 aa11.49□□□□□ -0.57
TMEM116-206ENST00000548283 MYT1Q01538 1121 aa11.48□□□□□ -0.57
TMEM116-206ENST00000548283 TPRNQ4KMQ1 711 aa11.48□□□□□ -0.57
TMEM116-206ENST00000548283 CASKIN1Q8WXD9 1431 aa11.47□□□□□ -0.57
TMEM116-206ENST00000548283 TDRD9Q8NDG6 1382 aaKnown RBP11.47□□□□□ -0.57
TMEM116-206ENST00000548283 ADCY10Q96PN6 1610 aa11.46□□□□□ -0.57
TMEM116-206ENST00000548283 KLHL34Q8N239 644 aa11.45□□□□□ -0.58
TMEM116-206ENST00000548283 RANGAP1P46060 587 aaPredicted RBP11.45□□□□□ -0.58
TMEM116-206ENST00000548283 TAOK2Q9UL54 1235 aa11.43□□□□□ -0.58
TMEM116-206ENST00000548283 HECW1Q76N89 1606 aa11.42□□□□□ -0.58
TMEM116-206ENST00000548283 ABCA8O94911 1581 aa11.41□□□□□ -0.58
TMEM116-206ENST00000548283 FMN1Q68DA7 1419 aa11.39□□□□□ -0.59
TMEM116-206ENST00000548283 PODXL2Q9NZ53 605 aa11.39□□□□□ -0.59
TMEM116-206ENST00000548283 RRBP1Q9P2E9 1410 aaKnown RBP11.38□□□□□ -0.59
TMEM116-206ENST00000548283 RAPGEF6Q8TEU7 1601 aa11.38□□□□□ -0.59
TMEM116-206ENST00000548283 CCDC18Q5T9S5 1454 aa11.38□□□□□ -0.59
TMEM116-206ENST00000548283 FAM9AQ8IZU1 332 aaPredicted RBP11.37□□□□□ -0.59
TMEM116-206ENST00000548283 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.37□□□□□ -0.59
TMEM116-206ENST00000548283 LRRC9Q6ZRR7 1453 aa11.36□□□□□ -0.59
TMEM116-206ENST00000548283 TTBK1Q5TCY1 1321 aaPredicted RBP11.35□□□□□ -0.59
TMEM116-206ENST00000548283 EHBP1L1Q8N3D4 1523 aa11.34□□□□□ -0.59
TMEM116-206ENST00000548283 ARXQ96QS3 562 aa11.34□□□□□ -0.59
TMEM116-206ENST00000548283 MAGI3Q5TCQ9 1506 aa11.32□□□□□ -0.6
TMEM116-206ENST00000548283 UHRF1BP1LA0JNW5 1464 aa11.31□□□□□ -0.6
TMEM116-206ENST00000548283 SUPT6HQ7KZ85 1726 aaKnown RBP11.31□□□□□ -0.6
TMEM116-206ENST00000548283 EIF5BO60841 1220 aaKnown RBP11.3□□□□□ -0.6
TMEM116-206ENST00000548283 PCGF6Q9BYE7 350 aa11.3□□□□□ -0.6
TMEM116-206ENST00000548283 TCOF1Q13428 1488 aaKnown RBP11.29□□□□□ -0.6
TMEM116-206ENST00000548283 TRIM26Q12899 539 aaPredicted RBP11.29□□□□□ -0.6
TMEM116-206ENST00000548283 KDM5BQ9UGL1 1544 aa11.29□□□□□ -0.6
TMEM116-206ENST00000548283 NUP153P49790 1475 aaKnown RBP11.28□□□□□ -0.6
TMEM116-206ENST00000548283 EPRSP07814 1512 aaKnown RBP11.27□□□□□ -0.61
TMEM116-206ENST00000548283 SCAF1Q9H7N4 1312 aaKnown RBP11.27□□□□□ -0.61
TMEM116-206ENST00000548283 FHOD3Q2V2M9 1422 aa11.27□□□□□ -0.61
TMEM116-206ENST00000548283 UBTFP17480 764 aaKnown RBP11.27□□□□□ -0.61
TMEM116-206ENST00000548283 CROCC2H7BZ55 1655 aa11.25□□□□□ -0.61
TMEM116-206ENST00000548283 HAP1P54257 671 aaPredicted RBP11.23□□□□□ -0.61
TMEM116-206ENST00000548283 BCORL1Q5H9F3 1711 aa11.23□□□□□ -0.61
TMEM116-206ENST00000548283 ITSN2Q9NZM3 1697 aa11.23□□□□□ -0.61
TMEM116-206ENST00000548283 SLC4A1APQ9BWU0 796 aaKnown RBP11.22□□□□□ -0.61
TMEM116-206ENST00000548283 GCC2Q8IWJ2 1684 aa11.21□□□□□ -0.61
TMEM116-206ENST00000548283 ABCC2Q92887 1545 aa11.2□□□□□ -0.62
TMEM116-206ENST00000548283 HOMEZQ8IX15 550 aa11.2□□□□□ -0.62
TMEM116-206ENST00000548283 ARAP3Q8WWN8 1544 aa11.19□□□□□ -0.62
TMEM116-206ENST00000548283 CDC42BPAQ5VT25 1732 aa11.19□□□□□ -0.62
TMEM116-206ENST00000548283 ABCC10Q5T3U5 1492 aa11.18□□□□□ -0.62
TMEM116-206ENST00000548283 CARMIL2Q6F5E8 1435 aa11.18□□□□□ -0.62
TMEM116-206ENST00000548283 PLEKHG5O94827 1062 aa11.18□□□□□ -0.62
TMEM116-206ENST00000548283 GLI2P10070 1586 aa11.18□□□□□ -0.62
TMEM116-206ENST00000548283 AKNAQ7Z591 1439 aa11.18□□□□□ -0.62
TMEM116-206ENST00000548283 ERCC6L2Q5T890 1561 aa11.17□□□□□ -0.62
TMEM116-206ENST00000548283 MIA2Q96PC5 1412 aa11.17□□□□□ -0.62
TMEM116-206ENST00000548283 PREX2Q70Z35 1606 aa11.16□□□□□ -0.62
TMEM116-206ENST00000548283 ZCCHC11Q5TAX3 1644 aaKnown RBP11.16□□□□□ -0.62
TMEM116-206ENST00000548283 PTPN23Q9H3S7 1636 aa11.16□□□□□ -0.62
TMEM116-206ENST00000548283 DNMT1P26358 1616 aaKnown RBP11.15□□□□□ -0.62
TMEM116-206ENST00000548283 ADGBQ8N7X0 1667 aa11.15□□□□□ -0.62
TMEM116-206ENST00000548283 BCANQ96GW7 911 aa11.15□□□□□ -0.63
TMEM116-206ENST00000548283 NCOA2Q15596 1464 aa11.14□□□□□ -0.63
TMEM116-206ENST00000548283 ARHGEF5Q12774 1597 aa11.13□□□□□ -0.63
TMEM116-206ENST00000548283 MAST1Q9Y2H9 1570 aa11.13□□□□□ -0.63
TMEM116-206ENST00000548283 CDC42BPBQ9Y5S2 1711 aa11.13□□□□□ -0.63
TMEM116-206ENST00000548283 CDK13Q14004 1512 aaKnown RBP11.12□□□□□ -0.63
TMEM116-206ENST00000548283 PHLDB1Q86UU1 1377 aa11.12□□□□□ -0.63
TMEM116-206ENST00000548283 KIF14Q15058 1648 aa11.12□□□□□ -0.63
TMEM116-206ENST00000548283 MYOM3Q5VTT5 1437 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms