RNA–Protein interactions for RNA: ENST00000548159.5

CNOT2-209, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 1 (best)

Gene CNOT2, Length 2,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-209ENST00000548159 POLA1P09884 1462 aaPredicted RBP23.53■■□□□ 1.36
CNOT2-209ENST00000548159 PHLDB1Q86UU1 1377 aa23.52■■□□□ 1.36
CNOT2-209ENST00000548159 TOPBP1Q92547 1522 aa23.52■■□□□ 1.36
CNOT2-209ENST00000548159 RAB3GAP2Q9H2M9 1393 aa23.52■■□□□ 1.36
CNOT2-209ENST00000548159 DNMBPQ6XZF7 1577 aa23.51■■□□□ 1.35
CNOT2-209ENST00000548159 MAP3K1Q13233 1512 aa23.51■■□□□ 1.35
CNOT2-209ENST00000548159 PELP1Q8IZL8 1130 aaKnown RBP23.5■■□□□ 1.35
CNOT2-209ENST00000548159 ABCA10Q8WWZ4 1543 aa23.49■■□□□ 1.35
CNOT2-209ENST00000548159 FHOD3Q2V2M9 1422 aa23.48■■□□□ 1.35
CNOT2-209ENST00000548159 FAM50AQ14320 339 aaKnown RBP23.47■■□□□ 1.35
CNOT2-209ENST00000548159 FHAD1B1AJZ9 1412 aa23.46■■□□□ 1.35
CNOT2-209ENST00000548159 PCF11O94913 1555 aaKnown RBP23.46■■□□□ 1.35
CNOT2-209ENST00000548159 MAPKBP1O60336 1514 aa23.4■■□□□ 1.34
CNOT2-209ENST00000548159 DNAJC5BQ9UF47 199 aa23.39■■□□□ 1.34
CNOT2-209ENST00000548159 SETD5Q9C0A6 1442 aa23.39■■□□□ 1.34
CNOT2-209ENST00000548159 CFAP43Q8NDM7 1665 aa23.37■■□□□ 1.33
CNOT2-209ENST00000548159 URB2Q14146 1524 aaKnown RBP23.36■■□□□ 1.33
CNOT2-209ENST00000548159 TDRD9Q8NDG6 1382 aaKnown RBP23.35■■□□□ 1.33
CNOT2-209ENST00000548159 SIN3AQ96ST3 1273 aa23.33■■□□□ 1.33
CNOT2-209ENST00000548159 CASKIN1Q8WXD9 1431 aa23.31■■□□□ 1.32
CNOT2-209ENST00000548159 CUL7Q14999 1698 aa23.31■■□□□ 1.32
CNOT2-209ENST00000548159 FYCO1Q9BQS8 1478 aa23.3■■□□□ 1.32
CNOT2-209ENST00000548159 EFCAB5A4FU69 1503 aa23.29■■□□□ 1.32
CNOT2-209ENST00000548159 CTTNBP2Q8WZ74 1663 aa23.27■■□□□ 1.32
CNOT2-209ENST00000548159 LAMC3Q9Y6N6 1575 aa23.26■■□□□ 1.31
CNOT2-209ENST00000548159 AQRO60306 1485 aaKnown RBP eCLIP23.24■■□□□ 1.31
CNOT2-209ENST00000548159 WDR97A6NE52 1622 aa23.24■■□□□ 1.31
CNOT2-209ENST00000548159 FMN1Q68DA7 1419 aa23.21■■□□□ 1.31
CNOT2-209ENST00000548159 GAPVD1Q14C86 1478 aa23.21■■□□□ 1.31
CNOT2-209ENST00000548159 SNAPC4Q5SXM2 1469 aa23.21■■□□□ 1.31
CNOT2-209ENST00000548159 ABCA5Q8WWZ7 1642 aa23.19■■□□□ 1.3
CNOT2-209ENST00000548159 MTUS2Q5JR59 1369 aa23.16■■□□□ 1.3
CNOT2-209ENST00000548159 FGD6Q6ZV73 1430 aa23.15■■□□□ 1.3
CNOT2-209ENST00000548159 PDS5BQ9NTI5 1447 aa23.15■■□□□ 1.3
CNOT2-209ENST00000548159 KCNH8Q96L42 1107 aa23.14■■□□□ 1.3
CNOT2-209ENST00000548159 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.13■■□□□ 1.293e-6■■□□□ 12.8
CNOT2-209ENST00000548159 PTPRKQ15262 1439 aa23.11■■□□□ 1.29
CNOT2-209ENST00000548159 LRRIQ1Q96JM4 1722 aa23.11■■□□□ 1.29
CNOT2-209ENST00000548159 SAMD9Q5K651 1589 aa23.11■■□□□ 1.29
CNOT2-209ENST00000548159 KIF21AQ7Z4S6 1674 aa23.1■■□□□ 1.29
CNOT2-209ENST00000548159 HIRIP3Q9BW71 556 aaPredicted RBP23.1■■□□□ 1.29
CNOT2-209ENST00000548159 DDX10Q13206 875 aaKnown RBP23.07■■□□□ 1.28
CNOT2-209ENST00000548159 GRIN2BQ13224 1484 aa23.06■■□□□ 1.28
CNOT2-209ENST00000548159 NCOA2Q15596 1464 aa23.05■■□□□ 1.28
CNOT2-209ENST00000548159 PPP1R15AO75807 674 aaPredicted RBP23.05■■□□□ 1.28
CNOT2-209ENST00000548159 TARBP1Q13395 1621 aaKnown RBP23.03■■□□□ 1.28
CNOT2-209ENST00000548159 CCDC18Q5T9S5 1454 aa23.01■■□□□ 1.27
CNOT2-209ENST00000548159 TIMELESSQ9UNS1 1208 aa23.01■■□□□ 1.27
CNOT2-209ENST00000548159 MYOM3Q5VTT5 1437 aa23■■□□□ 1.27
CNOT2-209ENST00000548159 HFM1A2PYH4 1435 aa22.98■■□□□ 1.27
CNOT2-209ENST00000548159 MAGI3Q5TCQ9 1506 aa22.97■■□□□ 1.27
CNOT2-209ENST00000548159 NAIPQ13075 1403 aa22.96■■□□□ 1.27
CNOT2-209ENST00000548159 PTPN23Q9H3S7 1636 aa22.95■■□□□ 1.26
CNOT2-209ENST00000548159 ARID3CA6NKF2 412 aa22.95■■□□□ 1.26
CNOT2-209ENST00000548159 UACAQ9BZF9 1416 aa22.93■■□□□ 1.26
CNOT2-209ENST00000548159 SUPT16HQ9Y5B9 1047 aaKnown RBP22.93■■□□□ 1.26
CNOT2-209ENST00000548159 SUPT6HQ7KZ85 1726 aaKnown RBP22.93■■□□□ 1.26
CNOT2-209ENST00000548159 CHIC2Q9UKJ5 165 aa22.92■■□□□ 1.26
CNOT2-209ENST00000548159 EHBP1L1Q8N3D4 1523 aa22.91■■□□□ 1.26
CNOT2-209ENST00000548159 TONSLQ96HA7 1378 aa22.91■■□□□ 1.26
CNOT2-209ENST00000548159 RRP7BPQ9NSQ0 103 aa22.91■■□□□ 1.26
CNOT2-209ENST00000548159 THOC2Q8NI27 1593 aaKnown RBP22.91■■□□□ 1.26
CNOT2-209ENST00000548159 UGGT2Q9NYU1 1516 aa22.89■■□□□ 1.26
CNOT2-209ENST00000548159 PBRM1Q86U86 1689 aa22.88■■□□□ 1.25
CNOT2-209ENST00000548159 ARHGEF11O15085 1522 aa22.86■■□□□ 1.25
CNOT2-209ENST00000548159 IQGAP2Q13576 1575 aa22.85■■□□□ 1.25
CNOT2-209ENST00000548159 CDK13Q14004 1512 aaKnown RBP22.83■■□□□ 1.25
CNOT2-209ENST00000548159 EPRSP07814 1512 aaKnown RBP22.83■■□□□ 1.24
CNOT2-209ENST00000548159 ADAMTS12P58397 1594 aa22.82■■□□□ 1.24
CNOT2-209ENST00000548159 ZNF608Q9ULD9 1512 aaPredicted RBP22.8■■□□□ 1.24
CNOT2-209ENST00000548159 MRC2Q9UBG0 1479 aa22.79■■□□□ 1.24
CNOT2-209ENST00000548159 HECW1Q76N89 1606 aa22.79■■□□□ 1.24
CNOT2-209ENST00000548159 TRIM52Q96A61 297 aa22.77■■□□□ 1.24
CNOT2-209ENST00000548159 TCOF1Q13428 1488 aaKnown RBP22.76■■□□□ 1.23
CNOT2-209ENST00000548159 DENND4BO75064 1496 aaPredicted RBP22.75■■□□□ 1.23
CNOT2-209ENST00000548159 KDM6BO15054 1643 aa22.75■■□□□ 1.23
CNOT2-209ENST00000548159 KDM5BQ9UGL1 1544 aa22.75■■□□□ 1.23
CNOT2-209ENST00000548159 ANP32CO43423 234 aa22.73■■□□□ 1.23
CNOT2-209ENST00000548159 WDR62O43379 1518 aa22.73■■□□□ 1.23
CNOT2-209ENST00000548159 FOXD1Q16676 465 aa22.7■■□□□ 1.22
CNOT2-209ENST00000548159 CCER2I3L3R5 266 aa22.67■■□□□ 1.22
CNOT2-209ENST00000548159 MPHOSPH9Q99550 1183 aa22.67■■□□□ 1.22
CNOT2-209ENST00000548159 MIA2Q96PC5 1412 aa22.67■■□□□ 1.22
CNOT2-209ENST00000548159 ZNF644Q9H582 1327 aaPredicted RBP22.67■■□□□ 1.22
CNOT2-209ENST00000548159 GCC2Q8IWJ2 1684 aa22.66■■□□□ 1.22
CNOT2-209ENST00000548159 DISP1Q96F81 1524 aa22.65■■□□□ 1.22
CNOT2-209ENST00000548159 IFT140Q96RY7 1462 aa22.65■■□□□ 1.22
CNOT2-209ENST00000548159 KIAA0586Q9BVV6 1533 aa22.62■■□□□ 1.21
CNOT2-209ENST00000548159 BCANQ96GW7 911 aa22.62■■□□□ 1.21
CNOT2-209ENST00000548159 AKNAQ7Z591 1439 aa22.62■■□□□ 1.21
CNOT2-209ENST00000548159 HSPA5P11021 654 aaKnown RBP22.61■■□□□ 1.21
CNOT2-209ENST00000548159 NUP153P49790 1475 aaKnown RBP22.61■■□□□ 1.21
CNOT2-209ENST00000548159 KIAA0556O60303 1618 aa22.6■■□□□ 1.21
CNOT2-209ENST00000548159 L3MBTL2Q969R5 705 aa22.59■■□□□ 1.21
CNOT2-209ENST00000548159 FKBP8Q14318 412 aa22.59■■□□□ 1.21
CNOT2-209ENST00000548159 WASHC2AQ641Q2 1341 aa22.58■■□□□ 1.21
CNOT2-209ENST00000548159 DAPK1P53355 1430 aa22.57■■□□□ 1.2
CNOT2-209ENST00000548159 GRIN2AQ12879 1464 aa22.57■■□□□ 1.2
CNOT2-209ENST00000548159 ABCC5O15440 1437 aa22.56■■□□□ 1.2
CNOT2-209ENST00000548159 EIF4G3O43432 1585 aaKnown RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms