RNA–Protein interactions for RNA: ENST00000547685.5

MMP19-205, Transcript of matrix metallopeptidase 19, humanhuman

TSL 2

Gene MMP19, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-205ENST00000547685 TIMELESSQ9UNS1 1208 aa19.41■□□□□ 0.7
MMP19-205ENST00000547685 THOC2Q8NI27 1593 aaKnown RBP19.39■□□□□ 0.69
MMP19-205ENST00000547685 FANCD2Q9BXW9 1451 aa19.35■□□□□ 0.69
MMP19-205ENST00000547685 DEKP35659 375 aaKnown RBP19.35■□□□□ 0.69
MMP19-205ENST00000547685 PPP1R15AO75807 674 aaPredicted RBP19.29■□□□□ 0.68
MMP19-205ENST00000547685 KCNH8Q96L42 1107 aa19.29■□□□□ 0.68
MMP19-205ENST00000547685 MRC2Q9UBG0 1479 aa19.28■□□□□ 0.68
MMP19-205ENST00000547685 ERICH3Q5RHP9 1530 aa19.27■□□□□ 0.68
MMP19-205ENST00000547685 TOP2BQ02880 1626 aa19.27■□□□□ 0.68
MMP19-205ENST00000547685 ANP32CO43423 234 aa19.26■□□□□ 0.67
MMP19-205ENST00000547685 PRDM2Q13029 1718 aa19.26■□□□□ 0.67
MMP19-205ENST00000547685 BIVM-ERCC5R4GMW8 1640 aa19.26■□□□□ 0.67
MMP19-205ENST00000547685 MAPKBP1O60336 1514 aa19.24■□□□□ 0.67
MMP19-205ENST00000547685 CCNB3Q8WWL7 1395 aa19.22■□□□□ 0.67
MMP19-205ENST00000547685 CUX1P39880 1505 aa19.22■□□□□ 0.67
MMP19-205ENST00000547685 WDR62O43379 1518 aa19.21■□□□□ 0.67
MMP19-205ENST00000547685 ITGAEP38570 1179 aa19.19■□□□□ 0.66
MMP19-205ENST00000547685 RAPGEF2Q9Y4G8 1499 aa19.19■□□□□ 0.66
MMP19-205ENST00000547685 PPP4R2Q9NY27 417 aa19.18■□□□□ 0.66
MMP19-205ENST00000547685 URB2Q14146 1524 aaKnown RBP19.17■□□□□ 0.66
MMP19-205ENST00000547685 DDX10Q13206 875 aaKnown RBP19.17■□□□□ 0.66
MMP19-205ENST00000547685 ARAP1Q96P48 1450 aa19.15■□□□□ 0.66
MMP19-205ENST00000547685 NOP58Q9Y2X3 529 aaKnown RBP19.14■□□□□ 0.65
MMP19-205ENST00000547685 MAP3K1Q13233 1512 aa19.14■□□□□ 0.65
MMP19-205ENST00000547685 WDR97A6NE52 1622 aa19.14■□□□□ 0.65
MMP19-205ENST00000547685 RAB3GAP2Q9H2M9 1393 aa19.1■□□□□ 0.65
MMP19-205ENST00000547685 SETD5Q9C0A6 1442 aa19.09■□□□□ 0.65
MMP19-205ENST00000547685 TRIM52Q96A61 297 aa19.08■□□□□ 0.65
MMP19-205ENST00000547685 PRXQ9BXM0 1461 aa19.05■□□□□ 0.64
MMP19-205ENST00000547685 TOPBP1Q92547 1522 aa19.04■□□□□ 0.64
MMP19-205ENST00000547685 RTL5Q5HYW3 569 aaPredicted RBP19.03■□□□□ 0.64
MMP19-205ENST00000547685 UBE2Q2Q8WVN8 375 aa19.02■□□□□ 0.64
MMP19-205ENST00000547685 ANO8Q9HCE9 1232 aaPredicted RBP19.02■□□□□ 0.64
MMP19-205ENST00000547685 KANK4Q5T7N3 995 aaPredicted RBP19■□□□□ 0.63
MMP19-205ENST00000547685 DNMBPQ6XZF7 1577 aa18.99■□□□□ 0.63
MMP19-205ENST00000547685 USP35Q9P2H5 1018 aa18.96■□□□□ 0.63
MMP19-205ENST00000547685 ANP32AP39687 249 aaKnown RBP18.94■□□□□ 0.62
MMP19-205ENST00000547685 IPO9Q96P70 1041 aaKnown RBP18.93■□□□□ 0.62
MMP19-205ENST00000547685 FGD5Q6ZNL6 1462 aa18.93■□□□□ 0.62
MMP19-205ENST00000547685 HNRNPUQ00839 825 aaKnown RBP eCLIP18.93■□□□□ 0.62
MMP19-205ENST00000547685 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.92■□□□□ 0.62
MMP19-205ENST00000547685 C11orf95C9JLR9 678 aaPredicted RBP18.91■□□□□ 0.62
MMP19-205ENST00000547685 FHAD1B1AJZ9 1412 aa18.9■□□□□ 0.62
MMP19-205ENST00000547685 WASHC2AQ641Q2 1341 aa18.9■□□□□ 0.62
MMP19-205ENST00000547685 TIAM1Q13009 1591 aa18.89■□□□□ 0.61
MMP19-205ENST00000547685 ZNF608Q9ULD9 1512 aaPredicted RBP18.89■□□□□ 0.61
MMP19-205ENST00000547685 POLA1P09884 1462 aaPredicted RBP18.89■□□□□ 0.61
MMP19-205ENST00000547685 IFT140Q96RY7 1462 aa18.89■□□□□ 0.61
MMP19-205ENST00000547685 SALL2Q9Y467 1007 aaPredicted RBP18.88■□□□□ 0.61
MMP19-205ENST00000547685 KIF27Q86VH2 1401 aa18.87■□□□□ 0.61
MMP19-205ENST00000547685 ZBTB47Q9UFB7 747 aaPredicted RBP18.86■□□□□ 0.61
MMP19-205ENST00000547685 NBR1Q14596 966 aa18.84■□□□□ 0.61
MMP19-205ENST00000547685 RAD54L2Q9Y4B4 1467 aa18.84■□□□□ 0.61
MMP19-205ENST00000547685 ZBED9Q6R2W3 1325 aa18.84■□□□□ 0.61
MMP19-205ENST00000547685 ARHGAP35Q9NRY4 1499 aa18.82■□□□□ 0.6
MMP19-205ENST00000547685 TARBP1Q13395 1621 aaKnown RBP18.82■□□□□ 0.6
MMP19-205ENST00000547685 DNAJC5Q9H3Z4 198 aa18.81■□□□□ 0.6
MMP19-205ENST00000547685 PAK3O75914 559 aaPredicted RBP18.81■□□□□ 0.6
MMP19-205ENST00000547685 WASHC2CQ9Y4E1 1318 aa18.79■□□□□ 0.6
MMP19-205ENST00000547685 TONSLQ96HA7 1378 aa18.79■□□□□ 0.6
MMP19-205ENST00000547685 EIF4G3O43432 1585 aaKnown RBP18.79■□□□□ 0.6
MMP19-205ENST00000547685 SIN3AQ96ST3 1273 aa18.79■□□□□ 0.6
MMP19-205ENST00000547685 NCOA2Q15596 1464 aa18.79■□□□□ 0.6
MMP19-205ENST00000547685 LRRC9Q6ZRR7 1453 aa18.78■□□□□ 0.6
MMP19-205ENST00000547685 RANGAP1P46060 587 aaPredicted RBP18.78■□□□□ 0.6
MMP19-205ENST00000547685 AQRO60306 1485 aaKnown RBP eCLIP18.78■□□□□ 0.6
MMP19-205ENST00000547685 CCDC136Q96JN2 1154 aa18.78■□□□□ 0.6
MMP19-205ENST00000547685 CFAP43Q8NDM7 1665 aa18.76■□□□□ 0.59
MMP19-205ENST00000547685 IRX6P78412 446 aaPredicted RBP18.76■□□□□ 0.59
MMP19-205ENST00000547685 PPM1GO15355 546 aaPredicted RBP18.74■□□□□ 0.59
MMP19-205ENST00000547685 TDRD9Q8NDG6 1382 aaKnown RBP18.74■□□□□ 0.59
MMP19-205ENST00000547685 IGF1RP08069 1367 aa18.74■□□□□ 0.59
MMP19-205ENST00000547685 RNF123Q5XPI4 1314 aa18.73■□□□□ 0.59
MMP19-205ENST00000547685 SMG6Q86US8 1419 aaKnown RBP18.73■□□□□ 0.59
MMP19-205ENST00000547685 B4GALNT3Q6L9W6 998 aa18.73■□□□□ 0.59
MMP19-205ENST00000547685 CNTLNQ9NXG0 1405 aa18.71■□□□□ 0.59
MMP19-205ENST00000547685 IL27Q8NEV9 243 aa18.69■□□□□ 0.58
MMP19-205ENST00000547685 UACAQ9BZF9 1416 aa18.69■□□□□ 0.58
MMP19-205ENST00000547685 ABCA10Q8WWZ4 1543 aa18.68■□□□□ 0.58
MMP19-205ENST00000547685 PHLDB1Q86UU1 1377 aa18.65■□□□□ 0.58
MMP19-205ENST00000547685 ABCA5Q8WWZ7 1642 aa18.61■□□□□ 0.57
MMP19-205ENST00000547685 KDM5BQ9UGL1 1544 aa18.61■□□□□ 0.57
MMP19-205ENST00000547685 CARMIL1Q5VZK9 1371 aa18.61■□□□□ 0.57
MMP19-205ENST00000547685 TCERG1O14776 1098 aaKnown RBP18.61■□□□□ 0.57
MMP19-205ENST00000547685 FBLN2P98095 1184 aa18.61■□□□□ 0.57
MMP19-205ENST00000547685 RSPH6AQ9H0K4 717 aa18.61■□□□□ 0.57
MMP19-205ENST00000547685 POLR1AO95602 1720 aaPredicted RBP18.6■□□□□ 0.57
MMP19-205ENST00000547685 HFM1A2PYH4 1435 aa18.6■□□□□ 0.57
MMP19-205ENST00000547685 MS4A1P11836 297 aa18.59■□□□□ 0.57
MMP19-205ENST00000547685 OSCARQ8IYS5 282 aa18.59■□□□□ 0.57
MMP19-205ENST00000547685 HIRIP3Q9BW71 556 aaPredicted RBP18.59■□□□□ 0.57
MMP19-205ENST00000547685 SNAPC4Q5SXM2 1469 aa18.59■□□□□ 0.57
MMP19-205ENST00000547685 GAPVD1Q14C86 1478 aa18.58■□□□□ 0.57
MMP19-205ENST00000547685 CCDC18Q5T9S5 1454 aa18.58■□□□□ 0.57
MMP19-205ENST00000547685 PRKRIP1Q9H875 184 aaPredicted RBP18.58■□□□□ 0.56
MMP19-205ENST00000547685 NEFMP07197 916 aa18.57■□□□□ 0.56
MMP19-205ENST00000547685 DDRGK1Q96HY6 314 aa18.56■□□□□ 0.56
MMP19-205ENST00000547685 NUDCQ9Y266 331 aa18.56■□□□□ 0.56
MMP19-205ENST00000547685 CHD1O14646 1710 aa18.56■□□□□ 0.56
MMP19-205ENST00000547685 GRIN2BQ13224 1484 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms