RNA–Protein interactions for RNA: ENST00000547630.1

C12orf49-203, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 1 (best)

Gene C12orf49, Length 1,371 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-203ENST00000547630 RIMBP3BA6NNM3 1639 aa34.21■■■■□ 3.07
C12orf49-203ENST00000547630 RIMBP3Q9UFD9 1639 aa34.21■■■■□ 3.07
C12orf49-203ENST00000547630 KIAA0586Q9BVV6 1533 aa34.13■■■■□ 3.05
C12orf49-203ENST00000547630 SHROOM2Q13796 1616 aa34.09■■■■□ 3.05
C12orf49-203ENST00000547630 JPH4Q96JJ6 628 aa34.08■■■■□ 3.05
C12orf49-203ENST00000547630 ERCC6L2Q5T890 1561 aa34■■■■□ 3.03
C12orf49-203ENST00000547630 PRG4Q92954 1404 aaPredicted RBP33.98■■■■□ 3.03
C12orf49-203ENST00000547630 IQGAP2Q13576 1575 aa33.98■■■■□ 3.03
C12orf49-203ENST00000547630 ARAP1Q96P48 1450 aa33.98■■■■□ 3.03
C12orf49-203ENST00000547630 CYB5RLQ6IPT4 315 aa33.94■■■■□ 3.02
C12orf49-203ENST00000547630 CTTNBP2Q8WZ74 1663 aa33.94■■■■□ 3.02
C12orf49-203ENST00000547630 KIF21BO75037 1637 aa33.93■■■■□ 3.02
C12orf49-203ENST00000547630 EHMT2Q96KQ7 1210 aa33.85■■■■□ 3.01
C12orf49-203ENST00000547630 UGGT2Q9NYU1 1516 aa33.79■■■■□ 3
C12orf49-203ENST00000547630 GOLGA3Q08378 1498 aa33.77■■■■□ 3
C12orf49-203ENST00000547630 CARMIL2Q6F5E8 1435 aa33.76■■■□□ 2.99
C12orf49-203ENST00000547630 DISP1Q96F81 1524 aa33.73■■■□□ 2.99
C12orf49-203ENST00000547630 UBTFP17480 764 aaKnown RBP33.72■■■□□ 2.99
C12orf49-203ENST00000547630 KIAA0556O60303 1618 aa33.66■■■□□ 2.98
C12orf49-203ENST00000547630 TNIKQ9UKE5 1360 aa33.65■■■□□ 2.98
C12orf49-203ENST00000547630 TTBK1Q5TCY1 1321 aaPredicted RBP33.64■■■□□ 2.98
C12orf49-203ENST00000547630 PTPRGP23470 1445 aa33.61■■■□□ 2.97
C12orf49-203ENST00000547630 RANGAP1P46060 587 aaPredicted RBP33.6■■■□□ 2.97
C12orf49-203ENST00000547630 P3H3Q8IVL6 736 aa33.52■■■□□ 2.96
C12orf49-203ENST00000547630 SAMD9Q5K651 1589 aa33.5■■■□□ 2.95
C12orf49-203ENST00000547630 ADCY10Q96PN6 1610 aa33.42■■■□□ 2.94
C12orf49-203ENST00000547630 EFCAB5A4FU69 1503 aa33.39■■■□□ 2.94
C12orf49-203ENST00000547630 UACAQ9BZF9 1416 aa33.39■■■□□ 2.94
C12orf49-203ENST00000547630 FHOD3Q2V2M9 1422 aa33.36■■■□□ 2.93
C12orf49-203ENST00000547630 LOC105371045A0A1W2PR82 267 aa33.33■■■□□ 2.93
C12orf49-203ENST00000547630 NPM1P06748 294 aaKnown RBP eCLIP33.33■■■□□ 2.93
C12orf49-203ENST00000547630 UHRF1BP1LA0JNW5 1464 aa33.32■■■□□ 2.92
C12orf49-203ENST00000547630 PLB1Q6P1J6 1458 aa33.32■■■□□ 2.92
C12orf49-203ENST00000547630 ABCC2Q92887 1545 aa33.31■■■□□ 2.92
C12orf49-203ENST00000547630 ARHGAP35Q9NRY4 1499 aa33.3■■■□□ 2.92
C12orf49-203ENST00000547630 ABCA8O94911 1581 aa33.27■■■□□ 2.92
C12orf49-203ENST00000547630 CLIP1P30622 1438 aa33.19■■■□□ 2.9
C12orf49-203ENST00000547630 TRHP20396 242 aaPredicted RBP33.18■■■□□ 2.9
C12orf49-203ENST00000547630 KDM5BQ9UGL1 1544 aa33.17■■■□□ 2.9
C12orf49-203ENST00000547630 RAPGEF6Q8TEU7 1601 aa33.15■■■□□ 2.9
C12orf49-203ENST00000547630 MAPKBP1O60336 1514 aa33.13■■■□□ 2.89
C12orf49-203ENST00000547630 ZCCHC11Q5TAX3 1644 aaKnown RBP33.12■■■□□ 2.89
C12orf49-203ENST00000547630 CEP162Q5TB80 1403 aa33.1■■■□□ 2.89
C12orf49-203ENST00000547630 FMN1Q68DA7 1419 aa33.1■■■□□ 2.89
C12orf49-203ENST00000547630 ARID3CA6NKF2 412 aa33.09■■■□□ 2.89
C12orf49-203ENST00000547630 ASXL2Q76L83 1435 aa33.05■■■□□ 2.88
C12orf49-203ENST00000547630 NUP153P49790 1475 aaKnown RBP33.03■■■□□ 2.88
C12orf49-203ENST00000547630 ATP10BO94823 1461 aa33.02■■■□□ 2.88
C12orf49-203ENST00000547630 ABCC10Q5T3U5 1492 aa32.98■■■□□ 2.87
C12orf49-203ENST00000547630 ATP1B4Q9UN42 357 aaPredicted RBP32.97■■■□□ 2.87
C12orf49-203ENST00000547630 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.95■■■□□ 2.86
C12orf49-203ENST00000547630 HNRNPUL2Q1KMD3 747 aaKnown RBP32.95■■■□□ 2.86
C12orf49-203ENST00000547630 FAM69CQ0P6D2 419 aa32.94■■■□□ 2.86
C12orf49-203ENST00000547630 KIF13AQ9H1H9 1805 aa32.94■■■□□ 2.86
C12orf49-203ENST00000547630 DIP2BQ9P265 1576 aa32.93■■■□□ 2.86
C12orf49-203ENST00000547630 HECW1Q76N89 1606 aa32.91■■■□□ 2.86
C12orf49-203ENST00000547630 WDR7Q9Y4E6 1490 aa32.9■■■□□ 2.86
C12orf49-203ENST00000547630 PCF11O94913 1555 aaKnown RBP32.88■■■□□ 2.85
C12orf49-203ENST00000547630 CASKIN1Q8WXD9 1431 aa32.87■■■□□ 2.85
C12orf49-203ENST00000547630 CDK13Q14004 1512 aaKnown RBP32.86■■■□□ 2.85
C12orf49-203ENST00000547630 EPRSP07814 1512 aaKnown RBP32.84■■■□□ 2.85
C12orf49-203ENST00000547630 KCNH8Q96L42 1107 aa32.83■■■□□ 2.85
C12orf49-203ENST00000547630 FYCO1Q9BQS8 1478 aa32.8■■■□□ 2.84
C12orf49-203ENST00000547630 GLI2P10070 1586 aa32.78■■■□□ 2.84
C12orf49-203ENST00000547630 LRRIQ1Q96JM4 1722 aa32.77■■■□□ 2.84
C12orf49-203ENST00000547630 PLEKHD1A6NEE1 506 aa32.77■■■□□ 2.84
C12orf49-203ENST00000547630 CCDC18Q5T9S5 1454 aa32.7■■■□□ 2.83
C12orf49-203ENST00000547630 TSPOAP1O95153 1857 aa32.68■■■□□ 2.82
C12orf49-203ENST00000547630 VPS8Q8N3P4 1428 aa32.67■■■□□ 2.82
C12orf49-203ENST00000547630 CDK11AQ9UQ88 783 aaPredicted RBP32.67■■■□□ 2.82
C12orf49-203ENST00000547630 MAP3K4Q9Y6R4 1608 aa32.65■■■□□ 2.82
C12orf49-203ENST00000547630 CFAP43Q8NDM7 1665 aa32.6■■■□□ 2.81
C12orf49-203ENST00000547630 CD109Q6YHK3 1445 aa32.59■■■□□ 2.81
C12orf49-203ENST00000547630 PPRC1Q5VV67 1664 aaKnown RBP32.57■■■□□ 2.81
C12orf49-203ENST00000547630 ABCA9Q8IUA7 1624 aa32.57■■■□□ 2.8
C12orf49-203ENST00000547630 TROQ12816 1431 aaPredicted RBP32.56■■■□□ 2.8
C12orf49-203ENST00000547630 MAGI3Q5TCQ9 1506 aa32.53■■■□□ 2.8
C12orf49-203ENST00000547630 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.51■■■□□ 2.8
C12orf49-203ENST00000547630 TEX14Q8IWB6 1497 aa32.48■■■□□ 2.79
C12orf49-203ENST00000547630 KIF14Q15058 1648 aa32.48■■■□□ 2.79
C12orf49-203ENST00000547630 TTC37Q6PGP7 1564 aa32.47■■■□□ 2.79
C12orf49-203ENST00000547630 MTUS2Q5JR59 1369 aa32.42■■■□□ 2.78
C12orf49-203ENST00000547630 TIAM1Q13009 1591 aa32.41■■■□□ 2.78
C12orf49-203ENST00000547630 KDM6BO15054 1643 aa32.35■■■□□ 2.77
C12orf49-203ENST00000547630 EHBP1L1Q8N3D4 1523 aa32.34■■■□□ 2.77
C12orf49-203ENST00000547630 MAP3K1Q13233 1512 aa32.33■■■□□ 2.77
C12orf49-203ENST00000547630 PLCH2O75038 1416 aa32.32■■■□□ 2.76
C12orf49-203ENST00000547630 APLP2Q06481 763 aa32.32■■■□□ 2.76
C12orf49-203ENST00000547630 MYO5CQ9NQX4 1742 aa32.31■■■□□ 2.76
C12orf49-203ENST00000547630 NEO1Q92859 1461 aa32.28■■■□□ 2.76
C12orf49-203ENST00000547630 COL17A1Q9UMD9 1497 aaPredicted RBP32.28■■■□□ 2.76
C12orf49-203ENST00000547630 FANCAO15360 1455 aa32.27■■■□□ 2.76
C12orf49-203ENST00000547630 LRRC9Q6ZRR7 1453 aa32.27■■■□□ 2.76
C12orf49-203ENST00000547630 KANK4Q5T7N3 995 aaPredicted RBP32.26■■■□□ 2.75
C12orf49-203ENST00000547630 PHLDB1Q86UU1 1377 aa32.24■■■□□ 2.75
C12orf49-203ENST00000547630 ARAP3Q8WWN8 1544 aa32.23■■■□□ 2.75
C12orf49-203ENST00000547630 CFAP74Q9C0B2 1584 aa32.23■■■□□ 2.75
C12orf49-203ENST00000547630 AKNAQ7Z591 1439 aa32.22■■■□□ 2.75
C12orf49-203ENST00000547630 EFCAB2Q5VUJ9 269 aa32.21■■■□□ 2.75
C12orf49-203ENST00000547630 ARHGAP5Q13017 1502 aa32.21■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms